FFCP PHASE1:Mm9::chr15:58655121..58655136,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74868|HGNC=|MCL_coexpression_id=13|UniProt=Q4VAE3|association_with_transcript=-36bp_to_ENSMUST00000072113_5end|description=CAGE_peak_4_at_Tmem65_5end|id=chr15:58655121..58655136,-|ontology_enrichment_celltype=CL:0000117!3.81e-14!23;CL:0000337!3.81e-14!23;CL:0000540!1.45e-11!33;CL:0000047!1.45e-11!33;CL:0000031!1.45e-11!33;CL:0000404!1.45e-11!33;CL:0000393!2.16e-09!39;CL:0000211!2.16e-09!39;CL:0000221!4.53e-09!44;CL:0000133!4.53e-09!44;CL:0002319!1.39e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.52e-17,23;CL:0000337,6.52e-17,23;CL:0000540,1.57e-12,33;CL:0000047,1.57e-12,33;CL:0000031,1.57e-12,33;CL:0000404,1.57e-12,33;CL:0000221,1.70e-09,44;CL:0000133,1.70e-09,44;CL:0000393,2.90e-09,39;CL:0000211,2.90e-09,39;CL:0002319,6.24e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.89e-23!73;UBERON:0005743!7.89e-23!73;UBERON:0000033!7.95e-23!63;UBERON:0001049!4.05e-22!52;UBERON:0005068!4.05e-22!52;UBERON:0006241!4.05e-22!52;UBERON:0007135!4.05e-22!52;UBERON:0000073!8.02e-22!75;UBERON:0001016!8.02e-22!75;UBERON:0000955!3.75e-20!50;UBERON:0006238!3.75e-20!50;UBERON:0002020!9.40e-20!34;UBERON:0002616!1.21e-19!49;UBERON:0003056!3.24e-19!49;UBERON:0002346!7.74e-19!71;UBERON:0003075!7.74e-19!71;UBERON:0007284!7.74e-19!71;UBERON:0004121!3.29e-18!102;UBERON:0000924!3.29e-18!102;UBERON:0006601!3.29e-18!102;UBERON:0003080!1.98e-17!40;UBERON:0002780!7.61e-17!39;UBERON:0001890!7.61e-17!39;UBERON:0006240!7.61e-17!39;UBERON:0002791!2.36e-16!29;UBERON:0003528!2.36e-16!29;UBERON:0001893!2.36e-16!29;UBERON:0000153!1.39e-15!94;UBERON:0007811!2.44e-14!86;UBERON:0000956!1.75e-11!21;UBERON:0001869!1.75e-11!21;UBERON:0000203!1.75e-11!21;UBERON:0002619!1.59e-09!17;UBERON:0000025!1.29e-07!114;UBERON:0004111!1.80e-07!122;UBERON:0002021!3.25e-07!10;UBERON:0000411!3.25e-07!10;UBERON:0001950!3.25e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-26,54;UBERON:0002346,2.38e-26,64;UBERON:0003075,2.38e-26,64;UBERON:0007284,2.38e-26,64;UBERON:0001049,2.56e-25,52;UBERON:0005068,2.56e-25,52;UBERON:0006241,2.56e-25,52;UBERON:0007135,2.56e-25,52;UBERON:0001017,5.46e-25,73;UBERON:0002020,9.23e-24,34;UBERON:0001016,1.38e-23,75;UBERON:0010371,1.32e-22,73;UBERON:0003056,7.56e-22,49;UBERON:0010314,8.38e-22,92;UBERON:0004121,9.89e-22,95;UBERON:0000924,9.89e-22,95;UBERON:0006601,9.89e-22,95;UBERON:0000955,3.80e-21,47;UBERON:0006238,3.80e-21,47;UBERON:0002616,1.52e-20,46;UBERON:0003080,1.17e-19,40;UBERON:0003528,1.31e-19,29;UBERON:0002791,1.31e-19,29;UBERON:0001893,1.31e-19,29;UBERON:0002780,5.90e-19,39;UBERON:0001890,5.90e-19,39;UBERON:0006240,5.90e-19,39;UBERON:0000956,1.15e-13,21;UBERON:0001869,1.15e-13,21;UBERON:0000203,1.15e-13,21;UBERON:0002619,2.82e-11,17;UBERON:0002021,1.84e-08,10;UBERON:0000411,1.84e-08,10;UBERON:0001950,1.84e-08,10;UBERON:0000025,1.18e-07,114;UBERON:0004111,2.42e-07,122;UBERON:0002420,3.66e-07,8;UBERON:0007245,3.66e-07,8;UBERON:0010009,3.66e-07,8;UBERON:0010011,3.66e-07,8;UBERON:0000454,3.66e-07,8|phase1_expression=4.48416771893423,0,0,0,0,0.16787927191189,0.233612640595526,1.54947988129892,0.563154888606667,1.63845168425395,0.171217968225505,0,1.36960583944965,1.22388563386596,0,0.404950534779652,0,0.788655413395594,1.09691546884591,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0.498703936075477,0.204169356262369,2.09265815368454,0,0.523523743973798,0.588231488031014,0,0,0.629484089877886,0.506884656097573,0.550640256485045,0,0.872100625521786,1.09843091367236,2.13872888981712,0.419959264876088,0,1.67782606057736,0,0.672187598284928,0.771778308107841,0.573066879877513,1.03134418455488,5.66486090406874,4.23192783417626,7.60597684207415,0,0,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,1.92109152660777,2.7996195323289,2.56511282830212,4.6271491497304,5.99867067247988,5.52171352379034,3.91970557487853,4.79227355091182,3.67687514644008,3.30347642998166,3.31987079021488,3.68655679814984,6.59431438650969,6.95306091378313,6.77187381723788,4.18774498502071,6.19038871034848,4.27835093775068,7.36571463684169,6.69146899755784,8.57437450796383,0.681535739998656,0.377857800533928,0.869593466105033,0,0,0.539703191637817,0,0,0.702222100658759,0.340860645156116,0,0.35333957451034,4.92951969218382,0,0,0,0.216491041011214,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.693941307064543,0.304465478312141,0,0.301445281105245,0.23517741427141,0.879666139307728,0.988779870937496,0.722996784599558,1.76922110389975,1.29413479957927,0.883366073841574,0.484875253135222,0,4.09893115816166,5.86450779077674,0.255457055208591,0.11981512450592,0.599902730993408,0.762421362438388,4.49371918214468,3.20250421973039,10.9319286338192,6.43149984711423,4.09144731728529,4.1557608911912,3.73154905055843,1.42575109390443,0.373220911830279,0.758168275301024,2.94618598241064,1.95180664444056,1.60931473103431,1.98068342785884,0.452114453507145,2.72145996605311,1.5373646434182,2.248841389433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| ||
|EntrezGene=74868 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q4VAE3 | |||
|association_with_transcript=-36bp_to_ENSMUST00000072113_5end | |||
|description=CAGE_peak_4_at_Tmem65_5end | |||
|id=chr15:58655121..58655136,- | |||
|ontology_enrichment_celltype=CL:0000117!3.81e-14!23;CL:0000337!3.81e-14!23;CL:0000540!1.45e-11!33;CL:0000047!1.45e-11!33;CL:0000031!1.45e-11!33;CL:0000404!1.45e-11!33;CL:0000393!2.16e-09!39;CL:0000211!2.16e-09!39;CL:0000221!4.53e-09!44;CL:0000133!4.53e-09!44;CL:0002319!1.39e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.52e-17,23;CL:0000337,6.52e-17,23;CL:0000540,1.57e-12,33;CL:0000047,1.57e-12,33;CL:0000031,1.57e-12,33;CL:0000404,1.57e-12,33;CL:0000221,1.70e-09,44;CL:0000133,1.70e-09,44;CL:0000393,2.90e-09,39;CL:0000211,2.90e-09,39;CL:0002319,6.24e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.89e-23!73;UBERON:0005743!7.89e-23!73;UBERON:0000033!7.95e-23!63;UBERON:0001049!4.05e-22!52;UBERON:0005068!4.05e-22!52;UBERON:0006241!4.05e-22!52;UBERON:0007135!4.05e-22!52;UBERON:0000073!8.02e-22!75;UBERON:0001016!8.02e-22!75;UBERON:0000955!3.75e-20!50;UBERON:0006238!3.75e-20!50;UBERON:0002020!9.40e-20!34;UBERON:0002616!1.21e-19!49;UBERON:0003056!3.24e-19!49;UBERON:0002346!7.74e-19!71;UBERON:0003075!7.74e-19!71;UBERON:0007284!7.74e-19!71;UBERON:0004121!3.29e-18!102;UBERON:0000924!3.29e-18!102;UBERON:0006601!3.29e-18!102;UBERON:0003080!1.98e-17!40;UBERON:0002780!7.61e-17!39;UBERON:0001890!7.61e-17!39;UBERON:0006240!7.61e-17!39;UBERON:0002791!2.36e-16!29;UBERON:0003528!2.36e-16!29;UBERON:0001893!2.36e-16!29;UBERON:0000153!1.39e-15!94;UBERON:0007811!2.44e-14!86;UBERON:0000956!1.75e-11!21;UBERON:0001869!1.75e-11!21;UBERON:0000203!1.75e-11!21;UBERON:0002619!1.59e-09!17;UBERON:0000025!1.29e-07!114;UBERON:0004111!1.80e-07!122;UBERON:0002021!3.25e-07!10;UBERON:0000411!3.25e-07!10;UBERON:0001950!3.25e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-26,54;UBERON:0002346,2.38e-26,64;UBERON:0003075,2.38e-26,64;UBERON:0007284,2.38e-26,64;UBERON:0001049,2.56e-25,52;UBERON:0005068,2.56e-25,52;UBERON:0006241,2.56e-25,52;UBERON:0007135,2.56e-25,52;UBERON:0001017,5.46e-25,73;UBERON:0002020,9.23e-24,34;UBERON:0001016,1.38e-23,75;UBERON:0010371,1.32e-22,73;UBERON:0003056,7.56e-22,49;UBERON:0010314,8.38e-22,92;UBERON:0004121,9.89e-22,95;UBERON:0000924,9.89e-22,95;UBERON:0006601,9.89e-22,95;UBERON:0000955,3.80e-21,47;UBERON:0006238,3.80e-21,47;UBERON:0002616,1.52e-20,46;UBERON:0003080,1.17e-19,40;UBERON:0003528,1.31e-19,29;UBERON:0002791,1.31e-19,29;UBERON:0001893,1.31e-19,29;UBERON:0002780,5.90e-19,39;UBERON:0001890,5.90e-19,39;UBERON:0006240,5.90e-19,39;UBERON:0000956,1.15e-13,21;UBERON:0001869,1.15e-13,21;UBERON:0000203,1.15e-13,21;UBERON:0002619,2.82e-11,17;UBERON:0002021,1.84e-08,10;UBERON:0000411,1.84e-08,10;UBERON:0001950,1.84e-08,10;UBERON:0000025,1.18e-07,114;UBERON:0004111,2.42e-07,122;UBERON:0002420,3.66e-07,8;UBERON:0007245,3.66e-07,8;UBERON:0010009,3.66e-07,8;UBERON:0010011,3.66e-07,8;UBERON:0000454,3.66e-07,8 | |||
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| |||
|short_description=p4@Tmem65 | |||
}} |
Revision as of 10:37, 13 September 2013
Short description: | p4@Tmem65 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmem65_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -36bp_to_ENSMUST00000072113_5end |
EntrezGene: | Tmem65 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.52e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.52e-17 | 23 |
neuron | 1.57e-12 | 33 |
neuronal stem cell | 1.57e-12 | 33 |
neuroblast | 1.57e-12 | 33 |
electrically signaling cell | 1.57e-12 | 33 |
ectodermal cell | 1.70e-09 | 44 |
neurectodermal cell | 1.70e-09 | 44 |
electrically responsive cell | 2.90e-09 | 39 |
electrically active cell | 2.90e-09 | 39 |
neural cell | 6.24e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.