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FFCP PHASE1:Mm9::chr18:67770456..67770462,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=68166|HGNC=|MCL_coexpression_id=3159|UniProt=Q6ZPX2|association_with_transcript=-12bp_to_uc008fmp.1_5end|description=CAGE_peak_4_at_Spire1_5end|id=chr18:67770456..67770462,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.37e-07,23;CL:0000337,1.37e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.99e-15!102;UBERON:0000924!2.99e-15!102;UBERON:0006601!2.99e-15!102;UBERON:0000033!7.20e-14!63;UBERON:0000073!2.06e-13!75;UBERON:0001016!2.06e-13!75;UBERON:0002346!5.87e-13!71;UBERON:0003075!5.87e-13!71;UBERON:0007284!5.87e-13!71;UBERON:0001017!6.67e-13!73;UBERON:0005743!6.67e-13!73;UBERON:0000955!5.74e-12!50;UBERON:0006238!5.74e-12!50;UBERON:0001049!1.17e-11!52;UBERON:0005068!1.17e-11!52;UBERON:0006241!1.17e-11!52;UBERON:0007135!1.17e-11!52;UBERON:0002616!1.36e-11!49;UBERON:0002020!1.33e-09!34;UBERON:0003056!2.12e-09!49;UBERON:0002791!2.25e-08!29;UBERON:0003528!2.25e-08!29;UBERON:0001893!2.25e-08!29;UBERON:0000956!3.51e-08!21;UBERON:0001869!3.51e-08!21;UBERON:0000203!3.51e-08!21;UBERON:0003080!5.73e-08!40;UBERON:0002619!8.68e-08!17;UBERON:0002780!1.21e-07!39;UBERON:0001890!1.21e-07!39;UBERON:0006240!1.21e-07!39;UBERON:0002021!7.83e-07!10;UBERON:0000411!7.83e-07!10;UBERON:0001950!7.83e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.97e-17,54;UBERON:0001017,3.69e-15,73;UBERON:0001049,8.18e-15,52;UBERON:0005068,8.18e-15,52;UBERON:0006241,8.18e-15,52;UBERON:0007135,8.18e-15,52;UBERON:0001016,1.60e-14,75;UBERON:0002020,6.19e-14,34;UBERON:0002346,8.01e-14,64;UBERON:0003075,8.01e-14,64;UBERON:0007284,8.01e-14,64;UBERON:0003528,1.10e-13,29;UBERON:0002791,1.10e-13,29;UBERON:0001893,1.10e-13,29;UBERON:0002619,1.44e-13,17;UBERON:0004121,3.05e-13,95;UBERON:0000924,3.05e-13,95;UBERON:0006601,3.05e-13,95;UBERON:0002616,3.47e-13,46;UBERON:0000955,9.03e-13,47;UBERON:0006238,9.03e-13,47;UBERON:0002021,3.19e-12,10;UBERON:0000411,3.19e-12,10;UBERON:0001950,3.19e-12,10;UBERON:0000956,3.49e-12,21;UBERON:0001869,3.49e-12,21;UBERON:0000203,3.49e-12,21;UBERON:0010371,3.64e-11,73;UBERON:0002780,2.94e-10,39;UBERON:0001890,2.94e-10,39;UBERON:0006240,2.94e-10,39;UBERON:0003056,5.11e-10,49;UBERON:0003080,7.06e-10,40;UBERON:0011216,1.92e-07,194;UBERON:0010314,2.41e-07,92|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,1.33243904726265,1.41732687172878,4.89693314689703,0.157731082679119,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0.683045484958446,0,0,0.304130793658544,0,0,0.872100625521786,1.97717564461025,0.388859798148567,1.39986421625363,0,0,0,0,0,0,0.515672092277442,1.82084814773638,1.05798195854407,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.420649922702764,0.571301968807607,1.32521124570968,0,0.575072826109418,1.83843757322004,3.30347642998166,2.17068474744819,2.4577045320999,1.45074916503213,0.731901148819277,0,1.3959149950069,1.12552522006336,2.13917546887534,0.883885756421003,1.70846016958924,0.186399445825301,0.605809546665472,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.520455980298408,0,0.230615497256059,0.452167921657868,0.23517741427141,0.502666365318702,0.988779870937496,0.289198713839823,0,0.161766849947409,1.10420759230197,1.45462575940567,1.86391761218122,3.22058876712702,6.0739544975902,0,0,0,0,0.898743836428936,0,0.125654352112864,1.73824320192276,2.04572365864264,1.87009240103604,0.811206315338788,0.509196819251581,0.497627882440372,0.505445516867349,0.841767423545896,0.130120442962704,1.14951052216736,0,0.90422890701429,0.544291993210623,1.0249097622788,1.3118241438362,0.776110112217047,0,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.329119699826961,0,0.162137619091711,0,0,0.134206418760372,1.68231958851302,1.02904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0,0.398282546508734,0.948339504765408,0.114248512609729,0,0.407302655690628,0.581857461502877,0.701358198903186,0.569128834118316,0.442830443938806,0.784993639206874,0.493588655687202,0,1.16791574001266,0.786235980452812,1.12431056192427,2.43432145666204,2.17059443777175,1.2731292589071,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0.472905432318573,0.221464689648775,0.318909537314974,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,1.44495530989013,2.10981035865966,0.163934945376675,0.504941854408746,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.963963949265421,0.567760340833074,0.17806560366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|EntrezGene=68166
|HGNC=
|MCL_coexpression_id=3159
|UniProt=Q6ZPX2
|association_with_transcript=-12bp_to_uc008fmp.1_5end
|description=CAGE_peak_4_at_Spire1_5end
|id=chr18:67770456..67770462,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,1.37e-07,23;CL:0000337,1.37e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.99e-15!102;UBERON:0000924!2.99e-15!102;UBERON:0006601!2.99e-15!102;UBERON:0000033!7.20e-14!63;UBERON:0000073!2.06e-13!75;UBERON:0001016!2.06e-13!75;UBERON:0002346!5.87e-13!71;UBERON:0003075!5.87e-13!71;UBERON:0007284!5.87e-13!71;UBERON:0001017!6.67e-13!73;UBERON:0005743!6.67e-13!73;UBERON:0000955!5.74e-12!50;UBERON:0006238!5.74e-12!50;UBERON:0001049!1.17e-11!52;UBERON:0005068!1.17e-11!52;UBERON:0006241!1.17e-11!52;UBERON:0007135!1.17e-11!52;UBERON:0002616!1.36e-11!49;UBERON:0002020!1.33e-09!34;UBERON:0003056!2.12e-09!49;UBERON:0002791!2.25e-08!29;UBERON:0003528!2.25e-08!29;UBERON:0001893!2.25e-08!29;UBERON:0000956!3.51e-08!21;UBERON:0001869!3.51e-08!21;UBERON:0000203!3.51e-08!21;UBERON:0003080!5.73e-08!40;UBERON:0002619!8.68e-08!17;UBERON:0002780!1.21e-07!39;UBERON:0001890!1.21e-07!39;UBERON:0006240!1.21e-07!39;UBERON:0002021!7.83e-07!10;UBERON:0000411!7.83e-07!10;UBERON:0001950!7.83e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.97e-17,54;UBERON:0001017,3.69e-15,73;UBERON:0001049,8.18e-15,52;UBERON:0005068,8.18e-15,52;UBERON:0006241,8.18e-15,52;UBERON:0007135,8.18e-15,52;UBERON:0001016,1.60e-14,75;UBERON:0002020,6.19e-14,34;UBERON:0002346,8.01e-14,64;UBERON:0003075,8.01e-14,64;UBERON:0007284,8.01e-14,64;UBERON:0003528,1.10e-13,29;UBERON:0002791,1.10e-13,29;UBERON:0001893,1.10e-13,29;UBERON:0002619,1.44e-13,17;UBERON:0004121,3.05e-13,95;UBERON:0000924,3.05e-13,95;UBERON:0006601,3.05e-13,95;UBERON:0002616,3.47e-13,46;UBERON:0000955,9.03e-13,47;UBERON:0006238,9.03e-13,47;UBERON:0002021,3.19e-12,10;UBERON:0000411,3.19e-12,10;UBERON:0001950,3.19e-12,10;UBERON:0000956,3.49e-12,21;UBERON:0001869,3.49e-12,21;UBERON:0000203,3.49e-12,21;UBERON:0010371,3.64e-11,73;UBERON:0002780,2.94e-10,39;UBERON:0001890,2.94e-10,39;UBERON:0006240,2.94e-10,39;UBERON:0003056,5.11e-10,49;UBERON:0003080,7.06e-10,40;UBERON:0011216,1.92e-07,194;UBERON:0010314,2.41e-07,92
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,1.33243904726265,1.41732687172878,4.89693314689703,0.157731082679119,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0.683045484958446,0,0,0.304130793658544,0,0,0.872100625521786,1.97717564461025,0.388859798148567,1.39986421625363,0,0,0,0,0,0,0.515672092277442,1.82084814773638,1.05798195854407,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.420649922702764,0.571301968807607,1.32521124570968,0,0.575072826109418,1.83843757322004,3.30347642998166,2.17068474744819,2.4577045320999,1.45074916503213,0.731901148819277,0,1.3959149950069,1.12552522006336,2.13917546887534,0.883885756421003,1.70846016958924,0.186399445825301,0.605809546665472,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.520455980298408,0,0.230615497256059,0.452167921657868,0.23517741427141,0.502666365318702,0.988779870937496,0.289198713839823,0,0.161766849947409,1.10420759230197,1.45462575940567,1.86391761218122,3.22058876712702,6.0739544975902,0,0,0,0,0.898743836428936,0,0.125654352112864,1.73824320192276,2.04572365864264,1.87009240103604,0.811206315338788,0.509196819251581,0.497627882440372,0.505445516867349,0.841767423545896,0.130120442962704,1.14951052216736,0,0.90422890701429,0.544291993210623,1.0249097622788,1.3118241438362,0.776110112217047,0,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.329119699826961,0,0.162137619091711,0,0,0.134206418760372,1.68231958851302,1.02904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0,0.398282546508734,0.948339504765408,0.114248512609729,0,0.407302655690628,0.581857461502877,0.701358198903186,0.569128834118316,0.442830443938806,0.784993639206874,0.493588655687202,0,1.16791574001266,0.786235980452812,1.12431056192427,2.43432145666204,2.17059443777175,1.2731292589071,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0.472905432318573,0.221464689648775,0.318909537314974,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,1.44495530989013,2.10981035865966,0.163934945376675,0.504941854408746,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.963963949265421,0.567760340833074,0.178065603667255,0.977321756121456,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0.608929898229199,1.17335854031855,1.48282449604674,0.441056796109924,0.65954501176592,0.484393280087717,0.482503399425247,0.716234064018819,0.328281799490123,0.291480836629851,2.03967832211561,1.02522528478712,0.206386867963223,0.740778109478847,2.44878994106098,1.0935538217682,2.28778173206523,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0,0.209088296014469,0.436725127492355,0.269728692769641,0.661227645802687,0.523511883968059,0.129614973291793,1.86401793926078,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.179427713218951,0,0.19318959403219,0.563047426353546,0.73260649706906,1.2862102744744,0.501572104035363,1.12950368523413,2.30162618253588,1.71868654031819,2.40594455281163,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,1.03552062350364,0.518936737920883,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0,0.561849044819294,0.576226371643824,0.402048282689293,1.42888107384922,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.715308569841963,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.830445126869219,0.394017929502254,0,0.154936841185966,0.578719832943424,0.999242311751784,0.233931608445408,0.644613162144895,0.191288332068843,0.441182838239031,0.463735671240843
|short_description=p4@Spire1
}}

Revision as of 16:38, 13 September 2013

Short description:p4@Spire1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Spire1_5end
Coexpression cluster:MCL_coexpression_mm9:3159
Association with transcript: -12bp_to_uc008fmp.1_5end
EntrezGene:Spire1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Spire1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.37e-0723
neuroblast (sensu Vertebrata)1.37e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.97e-1754
central nervous system3.69e-1573
neural tube8.18e-1552
neural rod8.18e-1552
future spinal cord8.18e-1552
neural keel8.18e-1552
nervous system1.60e-1475
gray matter6.19e-1434
neurectoderm8.01e-1464
neural plate8.01e-1464
presumptive neural plate8.01e-1464
brain grey matter1.10e-1329
regional part of telencephalon1.10e-1329
telencephalon1.10e-1329
regional part of cerebral cortex1.44e-1317
ectoderm-derived structure3.05e-1395
ectoderm3.05e-1395
presumptive ectoderm3.05e-1395
regional part of brain3.47e-1346
brain9.03e-1347
future brain9.03e-1347
occipital lobe3.19e-1210
visual cortex3.19e-1210
neocortex3.19e-1210
cerebral cortex3.49e-1221
cerebral hemisphere3.49e-1221
pallium3.49e-1221
ecto-epithelium3.64e-1173
regional part of forebrain2.94e-1039
forebrain2.94e-1039
future forebrain2.94e-1039
pre-chordal neural plate5.11e-1049
anterior neural tube7.06e-1040
organ system subdivision1.92e-07194
structure with developmental contribution from neural crest2.41e-0792







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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