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FFCP PHASE1:Mm9::chr9:110034519..110034606,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20588|HGNC=|MCL_coexpression_id=561|UniProt=Q3UNN4,P97496,Q3UZD0,D3Z1X8,Q3UPK0|association_with_transcript=0bp_to_ENSMUST00000035057,ENSMUST00000088716,ENSMUST00000111966,ENSMUST00000111968,ENSMUST00000111969,NM_009211,uc009rtm.1,uc009rtn.1,uc009rto.1,uc009rtp.1,uc012hbg.1_5end|description=CAGE_peak_1_at_Smarcc1_5end|id=chr9:110034519..110034606,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.17e-10,43;UBERON:0007811,1.41e-07,36|phase1_expression=57.6535849577258,11.1672130444596,14.1049764210756,17.5429242557961,21.0376206577466,49.5243852140075,42.2838879477901,25.1790480711074,69.4088400207717,66.4743254754462,63.3506482434368,64.0570436732551,23.6257007305064,22.9915658361963,37.9745128469855,38.0653502692873,48.2697695908421,30.5998300397491,30.987861994897,26.7365480632759,25.9382034960763,70.6951572550303,57.2027538214268,23.998863419011,19.9586074528438,11.4846392823004,18.0920038386811,22.4090081993325,15.771943814879,24.4469225867133,16.8515188098032,26.6712882853045,27.6779154413057,15.8481681015439,45.3497043009501,33.5793983624155,43.8964115964094,6.69650609179052,25.0027310247616,16.2292360631877,8.2352408324342,12.9778642142105,13.1087795318411,19.6399036041901,17.6395860321955,33.5890556455877,10.1710874765245,15.9158364157726,11.2039953194581,11.2769341463084,16.7983705950435,14.3752564364972,33.724303817605,25.3876749703971,31.9289109185341,22.3815709351274,15.7593391966316,13.9231464914909,68.1806473096844,65.06589045046,41.1990412279016,17.2810711355257,16.8966011261116,8.54904731417329,5.93319817540185,10.6572017241915,13.4820049733282,12.2949857702897,99.3346485915216,81.4085808140095,80.7647851589307,18.852964970651,18.1112203580323,85.9885410488977,113.768574098647,74.4567217154117,16.5173821499083,21.3237854602263,17.8183578577242,76.7578194589728,85.8154096990603,83.3461392890816,13.4007839520663,19.6966913511088,19.2525792198781,27.4004584490511,28.0472211174233,45.4814647813733,36.5000251865947,44.2093626624695,26.957397449256,12.0459342777394,8.83962733820076,12.9528765993076,15.5946340187441,14.3368603871147,16.1511083151515,27.9505729028015,14.2882302531578,17.666978725517,39.7178443770239,38.4979432242953,58.6052051325285,49.7746692207332,41.7827709151643,39.2707791486403,47.5192978313896,20.5530983494308,44.7962538709607,22.5632051378534,56.7297018525264,28.6197549613413,41.7414050033466,32.5560903593665,39.1570394761897,29.6573155538034,21.5059621928905,20.2439099687876,42.461306493594,34.9416395886404,40.413997878252,44.6085232884404,11.1835056730873,14.9318206475889,12.9856958224342,22.9911349687732,73.9259318201528,42.5930939005319,56.1650403662946,20.2217363196511,17.3850229071078,64.9633000423509,28.6810128317256,31.9644321662913,19.1165000994795,26.120843353909,55.5024532984224,33.0922541822847,25.0195530849338,23.3590460033986,92.5156349464823,67.3613165990076,77.7868400759109,67.3650535725646,82.596309969712,81.4803261011645,69.9014865215577,26.3877438153796,136.885675512355,128.592134514117,95.3655092968603,59.8404349527279,63.1167255742107,54.327337977458,48.5645841922747,83.9924605974041,42.1327912387941,42.2050567668133,37.2254184208226,62.5519833057216,55.8172022755009,59.7806044050569,56.34524706928,55.2907491210205,44.4289285115649,46.2742550053312,40.5092836113425,43.7870033876886,39.0006844294949,23.9684497555479,20.0239959578264,22.6609980509265,21.9550115291051,15.165325319922,22.9216043934899,61.9485766523292,16.1905203662061,17.1892868331304,98.1125952462076,80.1216517918513,62.6295862025374,44.773742466382,37.1371333220933,26.0609107774206,29.4208018157597,25.6930369369457,31.9195715176342,28.2518190298434,28.6597208065107,18.8752075817387,24.8558757355898,20.1132685986911,68.2804443431094,72.5478055071778,77.7683376144255,61.7063523371302,47.1304543817331,51.5498276193841,35.159514641087,26.2746063403692,19.4678422523305,17.7691916047393,17.4907049981418,58.3957870006329,53.267487675678,48.5702162751284,48.6864291332407,37.3824597616246,22.4070749567649,23.5910832709665,28.6979351391813,23.612281534175,41.6927798929328,30.8876986564858,24.9630138491648,20.4588891137161,19.7337154874103,16.8855232477179,19.2143317773269,72.9541935316366,81.808418173897,72.6508967117805,57.96849132726,45.5617020241739,27.6130623427776,32.7824528401102,43.6649349174149,36.0987444127503,38.1096897091394,18.1888279334469,24.0032124793595,18.5150794984335,16.5870412333199,22.3001330365671,31.9646777462374,35.8717770196152,17.9816660786327,19.4571399743057,40.1640616172855,20.955086957963,64.9946931997489,53.4901079686395,74.967342411014,77.6648593345794,76.1971465361788,69.3537500432639,71.2466834947814,57.8666598664398,67.198922250909,19.6006003017302,49.1112694820609,59.4739116248632,63.5259141478947,36.4583971769303,25.2215762845929,61.4235009472103,56.2321815954437,38.0982261106914,31.3020006453619,33.5104311258881,31.7866800596912,49.8041209384183,38.5017168655499,34.1319698570681,35.8423269154996,15.470331487228,21.7881347682424,79.5870035618391,66.6197221481186,68.8021882451411,60.8277001392998,58.3266033558771,46.0737257685939,35.0134691481789,30.7419937563461,30.5038182043901,21.3912546113313,32.647478082413,54.2520473698243,60.6748024777248,53.5981824574083,54.8230605148505,29.4395644996149,17.9862542950194,35.0285305635598,56.550001821923,43.8911029866217,51.9896941332947,49.2099219795691,38.2059549254893,67.1414798475729,64.5176195212063,56.6619892598138,12.4107180341965,96.4824780422463,62.6223958750694,49.1424300739196,42.8631006829661,39.5236240380581,42.4822691112185,40.1695794825133,28.7931536182433,21.904930486313,21.1255366449555,44.531742156051,88.5137952580354,68.6652735396955,69.8079766155131,59.0260393293231,53.0522234041043,63.8423378232902,65.232396806819,64.0690594441093,51.2158336151133,45.2207109824849,54.3539127480467,62.8448167399509,53.3069867685453,70.0273235850315,66.9559841796381,66.1608911421612,73.319224207181,68.9710091905276,76.0277368109552,76.3592202683098,69.3684153741463,64.7120328111956,63.5960273242578,52.2439752751613,24.4868814304428,41.067401374202,37.1415366363229,56.5771157146944,27.6261119466032,22.5218970541418,41.5754187086692,37.9432030969947,27.586465721945,32.1908550291728,27.6195141904306,25.7802981047728,29.3868941807706,23.9778881919725,25.6833925112498,32.4010800111267,23.8670237708837,29.4542565839733,25.3702552758392,126.205414662359,124.495760501122,66.2446390326041,47.8920232624539,65.6089199025585,43.7547550111034,42.4491250101085,40.3828712188233,48.4588006483641,34.3668207998765,40.0497293826579,42.063674129095,41.389546301688,48.467040370486,44.7996657853784,36.1983205375136,48.7873012227842,48.0343958954626,40.384418278724,43.4236814396472,49.7160415958852,42.7716692844003,44.1106951402544,38.3714539909347,42.9138774693908,40.276553356438,40.7929379506283,40.5127355614278,41.284450609142,36.474247657753,45.3185769234345,44.4255215513791,45.4246457918355,45.0866207851161,45.9117734135116,46.7145780743959,38.1308521766016,38.2470476205971,30.4148447989461,31.7651643532102,22.7230478908013|short_description=p1@Smarcc1}}
|EntrezGene=20588
|HGNC=
|MCL_coexpression_id=561
|UniProt=Q3UNN4,P97496,Q3UZD0,D3Z1X8,Q3UPK0
|association_with_transcript=0bp_to_ENSMUST00000035057,ENSMUST00000088716,ENSMUST00000111966,ENSMUST00000111968,ENSMUST00000111969,NM_009211,uc009rtm.1,uc009rtn.1,uc009rto.1,uc009rtp.1,uc012hbg.1_5end
|description=CAGE_peak_1_at_Smarcc1_5end
|id=chr9:110034519..110034606,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.17e-10,43;UBERON:0007811,1.41e-07,36
|phase1_expression=57.6535849577258,11.1672130444596,14.1049764210756,17.5429242557961,21.0376206577466,49.5243852140075,42.2838879477901,25.1790480711074,69.4088400207717,66.4743254754462,63.3506482434368,64.0570436732551,23.6257007305064,22.9915658361963,37.9745128469855,38.0653502692873,48.2697695908421,30.5998300397491,30.987861994897,26.7365480632759,25.9382034960763,70.6951572550303,57.2027538214268,23.998863419011,19.9586074528438,11.4846392823004,18.0920038386811,22.4090081993325,15.771943814879,24.4469225867133,16.8515188098032,26.6712882853045,27.6779154413057,15.8481681015439,45.3497043009501,33.5793983624155,43.8964115964094,6.69650609179052,25.0027310247616,16.2292360631877,8.2352408324342,12.9778642142105,13.1087795318411,19.6399036041901,17.6395860321955,33.5890556455877,10.1710874765245,15.9158364157726,11.2039953194581,11.2769341463084,16.7983705950435,14.3752564364972,33.724303817605,25.3876749703971,31.9289109185341,22.3815709351274,15.7593391966316,13.9231464914909,68.1806473096844,65.06589045046,41.1990412279016,17.2810711355257,16.8966011261116,8.54904731417329,5.93319817540185,10.6572017241915,13.4820049733282,12.2949857702897,99.3346485915216,81.4085808140095,80.7647851589307,18.852964970651,18.1112203580323,85.9885410488977,113.768574098647,74.4567217154117,16.5173821499083,21.3237854602263,17.8183578577242,76.7578194589728,85.8154096990603,83.3461392890816,13.4007839520663,19.6966913511088,19.2525792198781,27.4004584490511,28.0472211174233,45.4814647813733,36.5000251865947,44.2093626624695,26.957397449256,12.0459342777394,8.83962733820076,12.9528765993076,15.5946340187441,14.3368603871147,16.1511083151515,27.9505729028015,14.2882302531578,17.666978725517,39.7178443770239,38.4979432242953,58.6052051325285,49.7746692207332,41.7827709151643,39.2707791486403,47.5192978313896,20.5530983494308,44.7962538709607,22.5632051378534,56.7297018525264,28.6197549613413,41.7414050033466,32.5560903593665,39.1570394761897,29.6573155538034,21.5059621928905,20.2439099687876,42.461306493594,34.9416395886404,40.413997878252,44.6085232884404,11.1835056730873,14.9318206475889,12.9856958224342,22.9911349687732,73.9259318201528,42.5930939005319,56.1650403662946,20.2217363196511,17.3850229071078,64.9633000423509,28.6810128317256,31.9644321662913,19.1165000994795,26.120843353909,55.5024532984224,33.0922541822847,25.0195530849338,23.3590460033986,92.5156349464823,67.3613165990076,77.7868400759109,67.3650535725646,82.596309969712,81.4803261011645,69.9014865215577,26.3877438153796,136.885675512355,128.592134514117,95.3655092968603,59.8404349527279,63.1167255742107,54.327337977458,48.5645841922747,83.9924605974041,42.1327912387941,42.2050567668133,37.2254184208226,62.5519833057216,55.8172022755009,59.7806044050569,56.34524706928,55.2907491210205,44.4289285115649,46.2742550053312,40.5092836113425,43.7870033876886,39.0006844294949,23.9684497555479,20.0239959578264,22.6609980509265,21.9550115291051,15.165325319922,22.9216043934899,61.9485766523292,16.1905203662061,17.1892868331304,98.1125952462076,80.1216517918513,62.6295862025374,44.773742466382,37.1371333220933,26.0609107774206,29.4208018157597,25.6930369369457,31.9195715176342,28.2518190298434,28.6597208065107,18.8752075817387,24.8558757355898,20.1132685986911,68.2804443431094,72.5478055071778,77.7683376144255,61.7063523371302,47.1304543817331,51.5498276193841,35.159514641087,26.2746063403692,19.4678422523305,17.7691916047393,17.4907049981418,58.3957870006329,53.267487675678,48.5702162751284,48.6864291332407,37.3824597616246,22.4070749567649,23.5910832709665,28.6979351391813,23.612281534175,41.6927798929328,30.8876986564858,24.9630138491648,20.4588891137161,19.7337154874103,16.8855232477179,19.2143317773269,72.9541935316366,81.808418173897,72.6508967117805,57.96849132726,45.5617020241739,27.6130623427776,32.7824528401102,43.6649349174149,36.0987444127503,38.1096897091394,18.1888279334469,24.0032124793595,18.5150794984335,16.5870412333199,22.3001330365671,31.9646777462374,35.8717770196152,17.9816660786327,19.4571399743057,40.1640616172855,20.955086957963,64.9946931997489,53.4901079686395,74.967342411014,77.6648593345794,76.1971465361788,69.3537500432639,71.2466834947814,57.8666598664398,67.198922250909,19.6006003017302,49.1112694820609,59.4739116248632,63.5259141478947,36.4583971769303,25.2215762845929,61.4235009472103,56.2321815954437,38.0982261106914,31.3020006453619,33.5104311258881,31.7866800596912,49.8041209384183,38.5017168655499,34.1319698570681,35.8423269154996,15.470331487228,21.7881347682424,79.5870035618391,66.6197221481186,68.8021882451411,60.8277001392998,58.3266033558771,46.0737257685939,35.0134691481789,30.7419937563461,30.5038182043901,21.3912546113313,32.647478082413,54.2520473698243,60.6748024777248,53.5981824574083,54.8230605148505,29.4395644996149,17.9862542950194,35.0285305635598,56.550001821923,43.8911029866217,51.9896941332947,49.2099219795691,38.2059549254893,67.1414798475729,64.5176195212063,56.6619892598138,12.4107180341965,96.4824780422463,62.6223958750694,49.1424300739196,42.8631006829661,39.5236240380581,42.4822691112185,40.1695794825133,28.7931536182433,21.904930486313,21.1255366449555,44.531742156051,88.5137952580354,68.6652735396955,69.8079766155131,59.0260393293231,53.0522234041043,63.8423378232902,65.232396806819,64.0690594441093,51.2158336151133,45.2207109824849,54.3539127480467,62.8448167399509,53.3069867685453,70.0273235850315,66.9559841796381,66.1608911421612,73.319224207181,68.9710091905276,76.0277368109552,76.3592202683098,69.3684153741463,64.7120328111956,63.5960273242578,52.2439752751613,24.4868814304428,41.067401374202,37.1415366363229,56.5771157146944,27.6261119466032,22.5218970541418,41.5754187086692,37.9432030969947,27.586465721945,32.1908550291728,27.6195141904306,25.7802981047728,29.3868941807706,23.9778881919725,25.6833925112498,32.4010800111267,23.8670237708837,29.4542565839733,25.3702552758392,126.205414662359,124.495760501122,66.2446390326041,47.8920232624539,65.6089199025585,43.7547550111034,42.4491250101085,40.3828712188233,48.4588006483641,34.3668207998765,40.0497293826579,42.063674129095,41.389546301688,48.467040370486,44.7996657853784,36.1983205375136,48.7873012227842,48.0343958954626,40.384418278724,43.4236814396472,49.7160415958852,42.7716692844003,44.1106951402544,38.3714539909347,42.9138774693908,40.276553356438,40.7929379506283,40.5127355614278,41.284450609142,36.474247657753,45.3185769234345,44.4255215513791,45.4246457918355,45.0866207851161,45.9117734135116,46.7145780743959,38.1308521766016,38.2470476205971,30.4148447989461,31.7651643532102,22.7230478908013
|short_description=p1@Smarcc1
}}

Revision as of 16:55, 14 September 2013

Short description:p1@Smarcc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smarcc1_5end
Coexpression cluster:MCL_coexpression_mm9:561
Association with transcript: 0bp_to_ENSMUST00000035057, ENSMUST00000088716, ENSMUST00000111966, ENSMUST00000111968, ENSMUST00000111969, NM_009211, uc009rtm.1, uc009rtn.1, uc009rto.1, uc009rtp.1, uc012hbg.1_5end
EntrezGene:Smarcc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smarcc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G757.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I749.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I842.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E769.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F266.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E663.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F164.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A137.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A338.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A548.27
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A230.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.74
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H270.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I957.20
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.96
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I222.41
Ileum epithelium, pool1.CNhs13199.10252-104B915.77
Ileum epithelium, pool2.CNhs13232.10253-104C124.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.58
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F743.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.93
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C368.18
Mouse Granule cells, donor2.CNhs12357.11731-123E365.07
Mouse Granule cells, donor3.CNhs12108.11636-122C741.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C813.48
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D599.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F581.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D980.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D285.99
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2113.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D674.46
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D476.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F485.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D883.35
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.05
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.48
Mouse Schwann, donor1.CNhs12507.11728-123D936.50
Mouse Schwann, donor2.CNhs12573.11746-123F944.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H138.50
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G141.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G239.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G347.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.55
accessory axillary lymph node, adult.CNhs10475.1063-29H944.80
adrenal gland, adult.CNhs10508.49-24D722.56
adrenal gland, embryo E14.CNhs11038.406-44C556.73
adrenal gland, embryo E16.CNhs11004.1254-43D628.62
adrenal gland, embryo E17.CNhs11043.1263-45I141.74
adrenal gland, embryo E18.CNhs11026.1262-18F532.56
adrenal gland, neonate N00.CNhs11191.1311-23C139.16
adrenal gland, neonate N25.CNhs11223.1377-27I329.66
amnion, adult pregnant day17.5.CNhs10488.583-22A821.51
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G242.46
bone (os femoris), neonate N02.CNhs11227.1985-43F534.94
bone (os femoris), neonate N16.CNhs11225.1525-43A640.41
bone (os femoris), neonate N20.CNhs11195.1350-25C344.61
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H722.99
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C773.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D142.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D456.17
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F164.96
cortex, adult.CNhs10473.12-14D528.68
cortex, neonate N30.CNhs11107.1392-42F231.96
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B226.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B155.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.09
epididymis, adult.CNhs10490.58-23B225.02
eyeball, adult.CNhs10484.31-12G423.36
eyeball, embryo E12.CNhs11016.345-16C692.52
eyeball, embryo E14.CNhs10521.399-16E267.36
eyeball, embryo E15.CNhs10593.426-16C977.79
eyeball, embryo E17.CNhs11023.1261-18D467.37
eyeball, neonate N00.CNhs11207.633-15C682.60
eyeball, neonate N01.CNhs11140.1532-43E781.48
eyeball, neonate N02.CNhs11205.1551-44G869.90
eyeball, neonate N16.CNhs11188.777-19A226.39
forelimb, embryo E11.CNhs10596.335-25E2136.89
forelimb, embryo E12.CNhs10600.359-14H2128.59
forelimb, embryo E13.CNhs10589.384-1E295.37
forelimb, embryo E14.CNhs10577.413-26A859.84
forelimb, embryo E15.CNhs11007.437-20E763.12
forelimb, embryo E17.CNhs10598.1517-43C454.33
forelimb, embryo E18.CNhs11008.1520-43B548.56
gonad, embryo E13.CNhs11044.1564-45I683.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C842.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D242.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D537.23
heart, embryo E11.CNhs10586.331-24E962.55
heart, embryo E12.CNhs11015.353-12F555.82
heart, embryo E13.CNhs11013.376-3I959.78
heart, embryo E14.CNhs10597.403-26D456.35
heart, embryo E15.CNhs11017.431-16C855.29
heart, embryo E16.CNhs11021.457-17C644.43
heart, embryo E17.CNhs11025.479-18E546.27
heart, embryo E18.CNhs11030.1283-20G340.51
heart, neonate N00.CNhs11213.639-21E343.79
heart, neonate N03.CNhs11221.1349-25I239.00
heart, neonate N10.CNhs11118.749-24G123.97
heart, neonate N16.CNhs11209.782-15G120.02
heart, neonate N20.CNhs11127.821-26I622.66
heart, neonate N25.CNhs11196.1351-25D321.96
heart, neonate N30.CNhs11202.1390-42D215.17
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G161.95
intestinal mucosa, adult.CNhs10506.860-29I316.19
intestine, adult.CNhs10496.178-9A317.19
intestine, embryo E12.CNhs11019.1251-16I598.11
intestine, embryo E13.CNhs11010.381-16D580.12
intestine, embryo E15.CNhs10602.976-16D862.63
intestine, embryo E16.CNhs10585.463-22H444.77
intestine, embryo E17.CNhs10582.482-18D337.14
intestine, embryo E18.CNhs10526.1289-20F726.06
intestine, neonate N00.CNhs11126.644-26D129.42
intestine, neonate N01.CNhs11192.1322-23E925.69
intestine, neonate N06.CNhs11102.688-20B831.92
intestine, neonate N07.CNhs11095.720-20F228.25
intestine, neonate N10.CNhs11098.755-23A528.66
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E324.86
intestine, neonate N30.CNhs11131.1384-42G120.11
kidney, embryo E14.CNhs10606.411-4I968.28
kidney, embryo E15.CNhs10997.434-16F872.55
kidney, embryo E16.CNhs10584.464-22A577.77
kidney, embryo E17.CNhs11028.483-18I261.71
kidney, embryo E18.CNhs11001.1288-20C747.13
kidney, neonate N00.CNhs11214.646-21G751.55
kidney, neonate N10.CNhs11206.758-6D535.16
kidney, neonate N20.CNhs11113.832-19I126.27
kidney, neonate N25.CNhs11122.1353-25F319.47
kidney, neonate N30.CNhs11203.1385-42H117.77
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F858.40
liver, embryo E13.CNhs10524.378-3H653.27
liver, embryo E14.CNhs10594.409-16E148.57
liver, embryo E15.CNhs10520.433-16D748.69
liver, embryo E16.CNhs10523.462-17F537.38
liver, embryo E17.CNhs10510.481-18A322.41
liver, embryo E18.CNhs10579.499-43G423.59
liver, neonate N00.CNhs11117.641-24F428.70
liver, neonate N03.CNhs11123.1345-25G223.61
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H230.89
liver, neonate N10.CNhs11115.751-24B924.96
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H119.73
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G272.95
lung, embryo E14.CNhs10604.404-26F881.81
lung, embryo E15.CNhs11020.432-17C572.65
lung, embryo E16.CNhs10998.458-17B657.97
lung, embryo E17.CNhs10605.480-44A645.56
lung, embryo E18.CNhs10583.1287-20I627.61
lung, neonate N00.CNhs11224.640-42C632.78
lung, neonate N06.CNhs11212.683-20E543.66
lung, neonate N07.CNhs11111.715-19A336.10
lung, neonate N10.CNhs11219.750-23E638.11
lung, neonate N20.CNhs11109.822-18A418.19
lung, neonate N25.CNhs11119.1359-25C724.00
lung, neonate N30.CNhs11133.1394-42H218.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.30
mammary gland, adult lactating day02.CNhs10480.595-22B631.96
mammary gland, adult pregnant day19.CNhs10476.588-5H235.87
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A319.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E164.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E253.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E374.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D777.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D876.20
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D969.35
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D471.25
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D557.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D667.20
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I749.11
ovary, embryo E18.CNhs11040.505-44H759.47
ovary, neonate N00.CNhs11217.1299-22I463.53
oviduct, adult pregnant day01.CNhs10500.988-6G636.46
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F461.42
pancreas, embryo E15.CNhs11042.1556-45F256.23
pancreas, embryo E16.CNhs11003.460-26E538.10
pancreas, embryo E17.CNhs10599.1558-45G331.30
pancreas, embryo E18.CNhs10580.1535-43I733.51
pancreas, neonate N00.CNhs11105.645-26G931.79
pancreas, neonate N01.CNhs11138.1531-43D749.80
pancreas, neonate N02.CNhs11139.1539-43D838.50
pancreas, neonate N16.CNhs11136.787-43B634.13
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E679.59
pituitary gland, embryo E13.CNhs11009.370-44C766.62
pituitary gland, embryo E14.CNhs11037.398-44A568.80
pituitary gland, embryo E15.CNhs10592.427-16B960.83
pituitary gland, embryo E16.CNhs11036.449-43F658.33
pituitary gland, embryo E17.CNhs11039.1265-44F546.07
pituitary gland, neonate N00.CNhs11190.1308-22E935.01
placenta, adult pregnant day10.CNhs10472.539-13I730.74
placenta, adult pregnant day17.CNhs10464.577-18G330.50
prostate, adult.CNhs10470.859-1F821.39
skin, adult.CNhs10492.30-1C332.65
skin, neonate N00.CNhs11124.650-25G454.25
skin, neonate N03.CNhs11215.662-22H360.67
skin, neonate N06.CNhs11097.693-20I553.60
skin, neonate N10.CNhs11108.762-6C454.82
small intestine, neonate N16.CNhs11114.790-21I129.44
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G235.03
spleen, embryo E16.CNhs11035.461-43C156.55
spleen, embryo E18.CNhs11011.1271-21F243.89
spleen, neonate N10.CNhs11116.752-24D151.99
spleen, neonate N20.CNhs11112.824-19H149.21
spleen, neonate N25.CNhs11099.1354-25G338.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C667.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C964.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D356.66
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E396.48
stomach, embryo E15.CNhs10603.1252-16G862.62
stomach, embryo E16.CNhs11022.459-17D449.14
stomach, embryo E17.CNhs11006.1035-18D542.86
stomach, embryo E18.CNhs10999.1286-20C639.52
stomach, neonate N03.CNhs11193.1340-24B842.48
stomach, neonate N07.CNhs11210.718-18A940.17
stomach, neonate N25.CNhs11104.1355-25E428.79
stomach, neonate N30.CNhs11134.1386-42I121.90
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G544.53
testis, embryo E13.CNhs11031.389-23F588.51
testis, embryo E15.CNhs11034.443-27C568.67
testis, embryo E16.CNhs11033.470-26G569.81
testis, embryo E17.CNhs11029.486-18I559.03
testis, embryo E18.CNhs11027.503-18G553.05
testis, neonate N00.CNhs11189.1300-22B763.84
testis, neonate N07.CNhs11222.726-26I465.23
testis, neonate N10.CNhs11204.763-44D964.07
testis, neonate N20.CNhs11110.839-18H351.22
testis, neonate N30.CNhs11130.1391-42E245.22
thymus, adult.CNhs10471.38-12B554.35
thymus, embryo E14.CNhs11041.402-44I462.84
thymus, embryo E15.CNhs11005.430-45I253.31
thymus, embryo E16.CNhs11002.456-26C570.03
thymus, embryo E17.CNhs10581.478-18C166.96
thymus, embryo E18.CNhs10595.1273-19G466.16
thymus, neonate N02.CNhs11181.1541-43F873.32
thymus, neonate N03.CNhs11137.2104-43C768.97
thymus, neonate N06.CNhs11197.681-26C476.03
thymus, neonate N07.CNhs11211.713-19D376.36
thymus, neonate N10.CNhs11194.748-24E469.37
thymus, neonate N20.CNhs11186.820-7A264.71
thymus, neonate N25.CNhs11125.1362-25G763.60
thymus, neonate N30.CNhs11132.1393-42G252.24
tongue, adult.CNhs10499.32-1B424.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H341.07
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F737.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G556.58
urinary bladder, adult.CNhs10481.879-12E427.63
uterus, adult pregnant day19.CNhs10497.590-15F522.52
uterus, adult.CNhs10509.92-27E541.58
vagina, adult.CNhs10502.89-27D537.94
vesicular gland, adult.CNhs10491.51-27F827.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I8126.21
whole body, embryo E12.CNhs10587.857-27C9124.50
whole body, embryo E13.CNhs10512.372-23H266.24
whole body, embryo E14.5.CNhs10578.420-27D247.89
whole body, embryo E14.CNhs10519.395-14B165.61
whole body, embryo E16.CNhs10514.453-14F243.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G542.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G540.38
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G548.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G534.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G540.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G542.06
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G541.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G548.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G544.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G548.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G548.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G540.38
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G543.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G549.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G542.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G544.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G538.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G542.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G540.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G540.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G541.28
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G536.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G545.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G544.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G545.09
whole body, embryo E17.5.CNhs10513.490-9F945.91
whole body, embryo E17.CNhs10517.475-3I546.71
whole body, embryo E18.CNhs10516.493-3B338.13
whole body, neonate N00.CNhs10525.657-19C238.25
whole body, neonate N01.CNhs10576.659-23C630.41
whole body, neonate N06.CNhs10515.692-21D131.77
whole body, neonate N10.CNhs10518.761-6B422.72





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anterior region of body4.17e-1043
craniocervical region1.41e-0736







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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