FFCP PHASE1:Mm9::chr3:33042046..33042081,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58869|HGNC=|MCL_coexpression_id=1|UniProt=F8SLP9,Q8C437,D3YYH1|association_with_transcript=-42bp_to_ENSMUST00000108226,NM_001163516,uc008oww.2,uc008owx.2,uc008owz.2_5end|description=CAGE_peak_4_at_Pex5l_5end|id=chr3:33042046..33042081,-|ontology_enrichment_celltype=CL:0000117!6.50e-07!23;CL:0000337!6.50e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.35e-07,3;CL:0002614,5.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.68e-24!63;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0004121!6.47e-21!102;UBERON:0000924!6.47e-21!102;UBERON:0006601!6.47e-21!102;UBERON:0000955!1.30e-20!50;UBERON:0006238!1.30e-20!50;UBERON:0000073!1.64e-20!75;UBERON:0001016!1.64e-20!75;UBERON:0002346!6.61e-20!71;UBERON:0003075!6.61e-20!71;UBERON:0007284!6.61e-20!71;UBERON:0002616!6.84e-20!49;UBERON:0003056!8.93e-20!49;UBERON:0001017!3.42e-19!73;UBERON:0005743!3.42e-19!73;UBERON:0003080!5.61e-16!40;UBERON:0002780!3.25e-15!39;UBERON:0001890!3.25e-15!39;UBERON:0006240!3.25e-15!39;UBERON:0007811!4.82e-14!86;UBERON:0002020!1.96e-12!34;UBERON:0000153!2.08e-12!94;UBERON:0002021!6.51e-10!10;UBERON:0000411!6.51e-10!10;UBERON:0001950!6.51e-10!10;UBERON:0002791!1.35e-09!29;UBERON:0003528!1.35e-09!29;UBERON:0001893!1.35e-09!29;UBERON:0002619!5.62e-08!17;UBERON:0000956!2.36e-07!21;UBERON:0001869!2.36e-07!21;UBERON:0000203!2.36e-07!21;UBERON:0001894!4.40e-07!10;UBERON:0006222!4.40e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.71e-38,54;UBERON:0001049,1.09e-34,52;UBERON:0005068,1.09e-34,52;UBERON:0006241,1.09e-34,52;UBERON:0007135,1.09e-34,52;UBERON:0001016,2.81e-33,75;UBERON:0002346,3.46e-33,64;UBERON:0003075,3.46e-33,64;UBERON:0007284,3.46e-33,64;UBERON:0000955,2.06e-31,47;UBERON:0006238,2.06e-31,47;UBERON:0001017,2.08e-30,73;UBERON:0002616,8.20e-30,46;UBERON:0004121,8.40e-30,95;UBERON:0000924,8.40e-30,95;UBERON:0006601,8.40e-30,95;UBERON:0010371,3.83e-28,73;UBERON:0003056,4.16e-25,49;UBERON:0003080,1.20e-24,40;UBERON:0002780,5.59e-23,39;UBERON:0001890,5.59e-23,39;UBERON:0006240,5.59e-23,39;UBERON:0002021,1.07e-22,10;UBERON:0000411,1.07e-22,10;UBERON:0001950,1.07e-22,10;UBERON:0010314,9.90e-21,92;UBERON:0002020,6.06e-20,34;UBERON:0003528,2.87e-17,29;UBERON:0002791,2.87e-17,29;UBERON:0001893,2.87e-17,29;UBERON:0002619,2.85e-15,17;UBERON:0000956,2.57e-14,21;UBERON:0001869,2.57e-14,21;UBERON:0000203,2.57e-14,21;UBERON:0000025,7.47e-12,114;UBERON:0004111,1.33e-10,122;UBERON:0003076,3.21e-10,12;UBERON:0003057,3.21e-10,12;UBERON:0002950,5.55e-09,4;UBERON:0001891,5.55e-09,4;UBERON:0009616,5.55e-09,4;UBERON:0010286,5.55e-09,4;UBERON:0011216,7.43e-08,194;UBERON:0004684,1.35e-07,3;UBERON:0002275,1.35e-07,3;UBERON:0000483,2.61e-07,174;UBERON:0000119,3.87e-07,176;UBERON:0002038,5.17e-07,3;UBERON:0009663,5.17e-07,3;UBERON:0009661,5.17e-07,3;UBERON:0000125,5.17e-07,3;UBERON:0002308,5.17e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,1.71390590642282,0.662605622854841,0.244981598429908,0.0958454710182364,0,11.0115880999389,17.2377906415003,16.1286859919056,0.395658863190582,0.640413505216868,0,9.21303896704557,5.06486349028512,9.0150966188318,1.17851434189467,1.42371680799103,0.559198337475902,1.06016670666458,4.00529268565963,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.506719730950197,0,0.34255163915718,0,0,0,0,0,0,0.23517741427141,0,0,0.433798070759735,0,0,0,0,0,3.22058876712702,3.14170060220183,0.255457055208591,0,0,0,13.1815762676244,5.03250663100489,0,19.6421481817272,16.8772201838018,10.5971902725376,11.1946471516753,0,0.124406970610093,0,7.78634866779954,0.130120442962704,0,0.360124259610698,0.90422890701429,0.884474488967262,0.768682321709099,1.49922759295566,14.7460921321239,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,22.0804445992334,0.205809224758569,0,0,0,0,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,15.2523060488402,21.6841620195576,0,0,0,0,0,0,0,0.566153061577665,0,0,0,3.53453448063988,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.388076051348264,1.07168517515796,1.06404140185364,0.891844088010353,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.11937234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| ||
|EntrezGene=58869 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=F8SLP9,Q8C437,D3YYH1 | |||
|association_with_transcript=-42bp_to_ENSMUST00000108226,NM_001163516,uc008oww.2,uc008owx.2,uc008owz.2_5end | |||
|description=CAGE_peak_4_at_Pex5l_5end | |||
|id=chr3:33042046..33042081,- | |||
|ontology_enrichment_celltype=CL:0000117!6.50e-07!23;CL:0000337!6.50e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.35e-07,3;CL:0002614,5.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.68e-24!63;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0004121!6.47e-21!102;UBERON:0000924!6.47e-21!102;UBERON:0006601!6.47e-21!102;UBERON:0000955!1.30e-20!50;UBERON:0006238!1.30e-20!50;UBERON:0000073!1.64e-20!75;UBERON:0001016!1.64e-20!75;UBERON:0002346!6.61e-20!71;UBERON:0003075!6.61e-20!71;UBERON:0007284!6.61e-20!71;UBERON:0002616!6.84e-20!49;UBERON:0003056!8.93e-20!49;UBERON:0001017!3.42e-19!73;UBERON:0005743!3.42e-19!73;UBERON:0003080!5.61e-16!40;UBERON:0002780!3.25e-15!39;UBERON:0001890!3.25e-15!39;UBERON:0006240!3.25e-15!39;UBERON:0007811!4.82e-14!86;UBERON:0002020!1.96e-12!34;UBERON:0000153!2.08e-12!94;UBERON:0002021!6.51e-10!10;UBERON:0000411!6.51e-10!10;UBERON:0001950!6.51e-10!10;UBERON:0002791!1.35e-09!29;UBERON:0003528!1.35e-09!29;UBERON:0001893!1.35e-09!29;UBERON:0002619!5.62e-08!17;UBERON:0000956!2.36e-07!21;UBERON:0001869!2.36e-07!21;UBERON:0000203!2.36e-07!21;UBERON:0001894!4.40e-07!10;UBERON:0006222!4.40e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.71e-38,54;UBERON:0001049,1.09e-34,52;UBERON:0005068,1.09e-34,52;UBERON:0006241,1.09e-34,52;UBERON:0007135,1.09e-34,52;UBERON:0001016,2.81e-33,75;UBERON:0002346,3.46e-33,64;UBERON:0003075,3.46e-33,64;UBERON:0007284,3.46e-33,64;UBERON:0000955,2.06e-31,47;UBERON:0006238,2.06e-31,47;UBERON:0001017,2.08e-30,73;UBERON:0002616,8.20e-30,46;UBERON:0004121,8.40e-30,95;UBERON:0000924,8.40e-30,95;UBERON:0006601,8.40e-30,95;UBERON:0010371,3.83e-28,73;UBERON:0003056,4.16e-25,49;UBERON:0003080,1.20e-24,40;UBERON:0002780,5.59e-23,39;UBERON:0001890,5.59e-23,39;UBERON:0006240,5.59e-23,39;UBERON:0002021,1.07e-22,10;UBERON:0000411,1.07e-22,10;UBERON:0001950,1.07e-22,10;UBERON:0010314,9.90e-21,92;UBERON:0002020,6.06e-20,34;UBERON:0003528,2.87e-17,29;UBERON:0002791,2.87e-17,29;UBERON:0001893,2.87e-17,29;UBERON:0002619,2.85e-15,17;UBERON:0000956,2.57e-14,21;UBERON:0001869,2.57e-14,21;UBERON:0000203,2.57e-14,21;UBERON:0000025,7.47e-12,114;UBERON:0004111,1.33e-10,122;UBERON:0003076,3.21e-10,12;UBERON:0003057,3.21e-10,12;UBERON:0002950,5.55e-09,4;UBERON:0001891,5.55e-09,4;UBERON:0009616,5.55e-09,4;UBERON:0010286,5.55e-09,4;UBERON:0011216,7.43e-08,194;UBERON:0004684,1.35e-07,3;UBERON:0002275,1.35e-07,3;UBERON:0000483,2.61e-07,174;UBERON:0000119,3.87e-07,176;UBERON:0002038,5.17e-07,3;UBERON:0009663,5.17e-07,3;UBERON:0009661,5.17e-07,3;UBERON:0000125,5.17e-07,3;UBERON:0002308,5.17e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,1.71390590642282,0.662605622854841,0.244981598429908,0.0958454710182364,0,11.0115880999389,17.2377906415003,16.1286859919056,0.395658863190582,0.640413505216868,0,9.21303896704557,5.06486349028512,9.0150966188318,1.17851434189467,1.42371680799103,0.559198337475902,1.06016670666458,4.00529268565963,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.506719730950197,0,0.34255163915718,0,0,0,0,0,0,0.23517741427141,0,0,0.433798070759735,0,0,0,0,0,3.22058876712702,3.14170060220183,0.255457055208591,0,0,0,13.1815762676244,5.03250663100489,0,19.6421481817272,16.8772201838018,10.5971902725376,11.1946471516753,0,0.124406970610093,0,7.78634866779954,0.130120442962704,0,0.360124259610698,0.90422890701429,0.884474488967262,0.768682321709099,1.49922759295566,14.7460921321239,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,22.0804445992334,0.205809224758569,0,0,0,0,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,15.2523060488402,21.6841620195576,0,0,0,0,0,0,0,0.566153061577665,0,0,0,3.53453448063988,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.388076051348264,1.07168517515796,1.06404140185364,0.891844088010353,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,19.284231409093,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0,0,0.39061315453185,0,0.241584120826006,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0,0,0,0,12.4245405375755,12.4287813856938,6.87474616127276,19.247556422493,19.8673930733486,18.1294535373528,20.925697507186,18.9134905354173,23.5634052671786,21.2281727818246,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p4@Pex5l | |||
}} |
Revision as of 02:07, 14 September 2013
Short description: | p4@Pex5l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pex5l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -42bp_to_ENSMUST00000108226, NM_001163516, uc008oww.2, uc008owx.2, uc008owz.2_5end |
EntrezGene: | Pex5l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.35e-07 | 3 |
neuron of the substantia nigra | 5.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.