FFCP PHASE1:Mm9::chrX:7544928..7544938,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14460|HGNC=|MCL_coexpression_id=846|UniProt=P17679,Q3UIH9|association_with_transcript=2bp_to_NM_008089,uc009snl.1_5end|description=CAGE_peak_2_at_Gata1_5end|id=chrX:7544928..7544938,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000050,2.10e-10,9;CL:0000764,7.12e-09,3;CL:0000765,7.12e-09,3;CL:0000038,7.12e-09,3;CL:0000547,7.12e-09,3;CL:0002027,3.05e-08,3;CL:0002006,3.05e-08,3;CL:0002024,3.05e-08,3;CL:0000839,3.00e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,7.12e-09,3;DOID:0060083,7.12e-09,3;DOID:1240,7.12e-09,3|ontology_enrichment_uberon=UBERON:0002106!2.11e-07!6;UBERON:0004457!2.11e-07!6;UBERON:0000042!2.11e-07!6;UBERON:0004854!2.11e-07!6;UBERON:0009034!2.11e-07!6;UBERON:0002095!2.11e-07!6;UBERON:0004782!2.11e-07!6;UBERON:0003281!2.11e-07!6;UBERON:0009664!2.11e-07!6;UBERON:0002296!2.11e-07!6;UBERON:0005602!2.11e-07!6;UBERON:0001179!2.11e-07!6;UBERON:0006293!2.11e-07!6;UBERON:0000466!2.26e-07!79;UBERON:0000981!6.44e-07!4;UBERON:0002495!6.44e-07!4;UBERON:0003608!6.44e-07!4;UBERON:0003826!6.44e-07!4;UBERON:0008202!6.44e-07!4;UBERON:0004375!6.44e-07!4;UBERON:0002428!6.44e-07!4;UBERON:0003464!6.44e-07!4;UBERON:0003606!6.44e-07!4;UBERON:0009749!6.44e-07!4;UBERON:0003860!6.44e-07!4;UBERON:0005856!6.44e-07!4;UBERON:0005866!6.44e-07!4;UBERON:0007828!6.44e-07!4;UBERON:0005254!6.44e-07!4;UBERON:0001271!6.44e-07!4;UBERON:0002091!6.44e-07!4;UBERON:0001464!6.44e-07!4;UBERON:0003285!6.44e-07!4;UBERON:0010129!6.44e-07!4;UBERON:0006234!6.44e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.95e-09,6;UBERON:0004457,8.95e-09,6;UBERON:0000042,8.95e-09,6;UBERON:0004854,8.95e-09,6;UBERON:0009034,8.95e-09,6;UBERON:0002095,8.95e-09,6;UBERON:0004782,8.95e-09,6;UBERON:0003281,8.95e-09,6;UBERON:0009664,8.95e-09,6;UBERON:0002296,8.95e-09,6;UBERON:0005602,8.95e-09,6;UBERON:0001179,8.95e-09,6;UBERON:0006293,8.95e-09,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.01237633694913,0.699561878128147,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,6.98533740805594,7.38077745101484,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,1.76922110389975,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,2.16898637430922,1.96558995113203,2.47348323623339,2.63718157805054,0.482354319504834,1.01850340712568,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0.925972636848558,2.63715839806567,1.6403307326523,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0.651021924219751,3.35549902162275,1.93267296660805,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p2@Gata1}} | ||
|EntrezGene=14460 | |||
|HGNC= | |||
|MCL_coexpression_id=846 | |||
|UniProt=P17679,Q3UIH9 | |||
|association_with_transcript=2bp_to_NM_008089,uc009snl.1_5end | |||
|description=CAGE_peak_2_at_Gata1_5end | |||
|id=chrX:7544928..7544938,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,2.10e-10,9;CL:0000764,7.12e-09,3;CL:0000765,7.12e-09,3;CL:0000038,7.12e-09,3;CL:0000547,7.12e-09,3;CL:0002027,3.05e-08,3;CL:0002006,3.05e-08,3;CL:0002024,3.05e-08,3;CL:0000839,3.00e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.12e-09,3;DOID:0060083,7.12e-09,3;DOID:1240,7.12e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.11e-07!6;UBERON:0004457!2.11e-07!6;UBERON:0000042!2.11e-07!6;UBERON:0004854!2.11e-07!6;UBERON:0009034!2.11e-07!6;UBERON:0002095!2.11e-07!6;UBERON:0004782!2.11e-07!6;UBERON:0003281!2.11e-07!6;UBERON:0009664!2.11e-07!6;UBERON:0002296!2.11e-07!6;UBERON:0005602!2.11e-07!6;UBERON:0001179!2.11e-07!6;UBERON:0006293!2.11e-07!6;UBERON:0000466!2.26e-07!79;UBERON:0000981!6.44e-07!4;UBERON:0002495!6.44e-07!4;UBERON:0003608!6.44e-07!4;UBERON:0003826!6.44e-07!4;UBERON:0008202!6.44e-07!4;UBERON:0004375!6.44e-07!4;UBERON:0002428!6.44e-07!4;UBERON:0003464!6.44e-07!4;UBERON:0003606!6.44e-07!4;UBERON:0009749!6.44e-07!4;UBERON:0003860!6.44e-07!4;UBERON:0005856!6.44e-07!4;UBERON:0005866!6.44e-07!4;UBERON:0007828!6.44e-07!4;UBERON:0005254!6.44e-07!4;UBERON:0001271!6.44e-07!4;UBERON:0002091!6.44e-07!4;UBERON:0001464!6.44e-07!4;UBERON:0003285!6.44e-07!4;UBERON:0010129!6.44e-07!4;UBERON:0006234!6.44e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.95e-09,6;UBERON:0004457,8.95e-09,6;UBERON:0000042,8.95e-09,6;UBERON:0004854,8.95e-09,6;UBERON:0009034,8.95e-09,6;UBERON:0002095,8.95e-09,6;UBERON:0004782,8.95e-09,6;UBERON:0003281,8.95e-09,6;UBERON:0009664,8.95e-09,6;UBERON:0002296,8.95e-09,6;UBERON:0005602,8.95e-09,6;UBERON:0001179,8.95e-09,6;UBERON:0006293,8.95e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.01237633694913,0.699561878128147,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,6.98533740805594,7.38077745101484,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,1.76922110389975,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,2.16898637430922,1.96558995113203,2.47348323623339,2.63718157805054,0.482354319504834,1.01850340712568,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0.925972636848558,2.63715839806567,1.6403307326523,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0.651021924219751,3.35549902162275,1.93267296660805,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p2@Gata1 | |||
}} |
Revision as of 20:10, 14 September 2013
Short description: | p2@Gata1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gata1_5end |
Coexpression cluster: | MCL_coexpression_mm9:846 |
Association with transcript: | 2bp_to_NM_008089, uc009snl.1_5end |
EntrezGene: | Gata1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 2.10e-10 | 9 |
erythroid lineage cell | 7.12e-09 | 3 |
erythroblast | 7.12e-09 | 3 |
erythroid progenitor cell | 7.12e-09 | 3 |
proerythroblast | 7.12e-09 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 3.05e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.05e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.05e-08 | 3 |
myeloid lineage restricted progenitor cell | 3.00e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.95e-09 | 6 |
cavity lining | 8.95e-09 | 6 |
serous membrane | 8.95e-09 | 6 |
gastrointestinal system mesentery | 8.95e-09 | 6 |
stomach region | 8.95e-09 | 6 |
mesentery | 8.95e-09 | 6 |
gastrointestinal system serosa | 8.95e-09 | 6 |
mesentery of stomach | 8.95e-09 | 6 |
gut mesentery | 8.95e-09 | 6 |
dorsal mesentery | 8.95e-09 | 6 |
dorsal mesogastrium | 8.95e-09 | 6 |
peritoneal cavity | 8.95e-09 | 6 |
spleen primordium | 8.95e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.12e-09 | 3 |
immune system cancer | 7.12e-09 | 3 |
leukemia | 7.12e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.