FFCP PHASE1:Mm9::chr2:131977673..131977687,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=130|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:131977673..131977687,+|id=chr2:131977673..131977687,+|ontology_enrichment_celltype=CL:0000049!1.46e-08!19;CL:0000215!7.85e-07!3|ontology_enrichment_celltype_v019_2=CL:0000049,8.84e-24,19;CL:0000557,8.43e-17,7;CL:0000988,2.98e-14,32;CL:0002032,2.98e-14,32;CL:0000037,2.98e-14,32;CL:0000837,2.98e-14,32;CL:0000213,6.50e-14,1;CL:0002078,6.50e-14,1;CL:0000115,6.50e-14,1;CL:0002262,6.50e-14,1;CL:1000398,6.50e-14,1;CL:0002320,1.70e-13,46;CL:0000134,1.70e-13,46;CL:0000219,1.59e-11,54;CL:0000763,9.61e-08,16;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.50e-14,1;UBERON:0001281,6.50e-14,1;UBERON:0000353,6.50e-14,1;UBERON:0003497,6.50e-14,1;UBERON:0003909,6.50e-14,1;UBERON:0003928,6.50e-14,1;UBERON:0003835,6.50e-14,1;UBERON:0003513,6.50e-14,1;UBERON:0001280,6.50e-14,1;UBERON:0004647,6.50e-14,1;UBERON:0002294,6.50e-14,1;UBERON:0001173,6.50e-14,1;UBERON:0004912,6.50e-14,1;UBERON:0005171,6.50e-14,1;UBERON:0002384,1.70e-13,46;UBERON:0002371,9.61e-08,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,2.99951365496704,1.90605340609597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,4.88961023517959,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:131977673..131977687,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:131977673..131977687,+ | |||
|id=chr2:131977673..131977687,+ | |||
|ontology_enrichment_celltype=CL:0000049!1.46e-08!19;CL:0000215!7.85e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,8.84e-24,19;CL:0000557,8.43e-17,7;CL:0000988,2.98e-14,32;CL:0002032,2.98e-14,32;CL:0000037,2.98e-14,32;CL:0000837,2.98e-14,32;CL:0000213,6.50e-14,1;CL:0002078,6.50e-14,1;CL:0000115,6.50e-14,1;CL:0002262,6.50e-14,1;CL:1000398,6.50e-14,1;CL:0002320,1.70e-13,46;CL:0000134,1.70e-13,46;CL:0000219,1.59e-11,54;CL:0000763,9.61e-08,16;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.50e-14,1;UBERON:0001281,6.50e-14,1;UBERON:0000353,6.50e-14,1;UBERON:0003497,6.50e-14,1;UBERON:0003909,6.50e-14,1;UBERON:0003928,6.50e-14,1;UBERON:0003835,6.50e-14,1;UBERON:0003513,6.50e-14,1;UBERON:0001280,6.50e-14,1;UBERON:0004647,6.50e-14,1;UBERON:0002294,6.50e-14,1;UBERON:0001173,6.50e-14,1;UBERON:0004912,6.50e-14,1;UBERON:0005171,6.50e-14,1;UBERON:0002384,1.70e-13,46;UBERON:0002371,9.61e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,2.99951365496704,1.90605340609597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,4.88961023517959,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:131977673..131977687,+ | |||
}} |
Revision as of 22:08, 13 September 2013
Short description: | p@chr2:131977673..131977687, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:131977673..131977687, + |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 8.84e-24 | 19 |
granulocyte monocyte progenitor cell | 8.43e-17 | 7 |
hematopoietic cell | 2.98e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.98e-14 | 32 |
hematopoietic stem cell | 2.98e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.98e-14 | 32 |
lining cell | 6.50e-14 | 1 |
meso-epithelial cell | 6.50e-14 | 1 |
endothelial cell | 6.50e-14 | 1 |
endothelial cell of sinusoid | 6.50e-14 | 1 |
endothelial cell of hepatic sinusoid | 6.50e-14 | 1 |
connective tissue cell | 1.70e-13 | 46 |
mesenchymal cell | 1.70e-13 | 46 |
motile cell | 1.59e-11 | 54 |
myeloid cell | 9.61e-08 | 16 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
bile duct | 6.50e-14 | 1 |
hepatic sinusoid | 6.50e-14 | 1 |
parenchyma | 6.50e-14 | 1 |
abdomen blood vessel | 6.50e-14 | 1 |
sinusoid | 6.50e-14 | 1 |
digestive system duct | 6.50e-14 | 1 |
abdominal segment blood vessel | 6.50e-14 | 1 |
trunk blood vessel | 6.50e-14 | 1 |
liver parenchyma | 6.50e-14 | 1 |
liver lobule | 6.50e-14 | 1 |
biliary system | 6.50e-14 | 1 |
biliary tree | 6.50e-14 | 1 |
biliary bud | 6.50e-14 | 1 |
hepatic duct | 6.50e-14 | 1 |
connective tissue | 1.70e-13 | 46 |
bone marrow | 9.61e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.