FFCP PHASE1:Mm9::chr9:121223913..121223935,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:121223913..121223935,-|id=chr9:121223913..121223935,-|ontology_enrichment_celltype=CL:0002563!2.05e-10!9;CL:0002251!2.05e-10!9;CL:0002250!2.93e-07!3|ontology_enrichment_celltype_v019_2=CL:0002250,1.86e-12,3;CL:0000213,4.59e-10,1;CL:0002078,4.59e-10,1;CL:0000115,4.59e-10,1;CL:0002262,4.59e-10,1;CL:1000398,4.59e-10,1;CL:0000355,1.28e-09,9|ontology_enrichment_disease=DOID:0060100!6.43e-08!3;DOID:4045!6.43e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.68e-27,3;DOID:4045,1.68e-27,3;DOID:0050686,4.07e-14,6|ontology_enrichment_uberon=UBERON:0003350!2.05e-10!9;UBERON:0004808!2.05e-10!9;UBERON:0001277!2.05e-10!9;UBERON:0001242!8.52e-09!13;UBERON:0000060!8.52e-09!13;UBERON:0001262!8.52e-09!13;UBERON:0004786!8.52e-09!13;UBERON:0000485!2.59e-08!11;UBERON:0000344!1.97e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.59e-10,1;UBERON:0001281,4.59e-10,1;UBERON:0000353,4.59e-10,1;UBERON:0003497,4.59e-10,1;UBERON:0003909,4.59e-10,1;UBERON:0003928,4.59e-10,1;UBERON:0003835,4.59e-10,1;UBERON:0003513,4.59e-10,1;UBERON:0001280,4.59e-10,1;UBERON:0004647,4.59e-10,1;UBERON:0002294,4.59e-10,1;UBERON:0001173,4.59e-10,1;UBERON:0004912,4.59e-10,1;UBERON:0005171,4.59e-10,1;UBERON:0001134,1.28e-09,9;UBERON:0002036,1.28e-09,9;UBERON:0002385,1.28e-09,9;UBERON:0000486,1.28e-09,9;UBERON:0007503,1.28e-09,9;UBERON:0001015,1.28e-09,9;UBERON:0002329,1.28e-09,9;UBERON:0003082,1.28e-09,9;UBERON:0003059,1.28e-09,9;UBERON:0007282,1.28e-09,9;UBERON:0004290,1.28e-09,9;UBERON:0009618,1.28e-09,9;UBERON:0000383,1.03e-08,10;UBERON:0007524,5.67e-08,11;UBERON:0003077,5.67e-08,11;UBERON:0007285,5.67e-08,11|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,2.02196133825892,0.332469290716985,1.83752420636132,7.11503772252743,7.0320181007142,5.75876118371178,15.2940186888064,6.83045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0,0,0,0,0,0,0.169978429993855,0.839708713941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr9:121223913..121223935,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:121223913..121223935,- | |||
|id=chr9:121223913..121223935,- | |||
|ontology_enrichment_celltype=CL:0002563!2.05e-10!9;CL:0002251!2.05e-10!9;CL:0002250!2.93e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.86e-12,3;CL:0000213,4.59e-10,1;CL:0002078,4.59e-10,1;CL:0000115,4.59e-10,1;CL:0002262,4.59e-10,1;CL:1000398,4.59e-10,1;CL:0000355,1.28e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.43e-08!3;DOID:4045!6.43e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.68e-27,3;DOID:4045,1.68e-27,3;DOID:0050686,4.07e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0003350!2.05e-10!9;UBERON:0004808!2.05e-10!9;UBERON:0001277!2.05e-10!9;UBERON:0001242!8.52e-09!13;UBERON:0000060!8.52e-09!13;UBERON:0001262!8.52e-09!13;UBERON:0004786!8.52e-09!13;UBERON:0000485!2.59e-08!11;UBERON:0000344!1.97e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.59e-10,1;UBERON:0001281,4.59e-10,1;UBERON:0000353,4.59e-10,1;UBERON:0003497,4.59e-10,1;UBERON:0003909,4.59e-10,1;UBERON:0003928,4.59e-10,1;UBERON:0003835,4.59e-10,1;UBERON:0003513,4.59e-10,1;UBERON:0001280,4.59e-10,1;UBERON:0004647,4.59e-10,1;UBERON:0002294,4.59e-10,1;UBERON:0001173,4.59e-10,1;UBERON:0004912,4.59e-10,1;UBERON:0005171,4.59e-10,1;UBERON:0001134,1.28e-09,9;UBERON:0002036,1.28e-09,9;UBERON:0002385,1.28e-09,9;UBERON:0000486,1.28e-09,9;UBERON:0007503,1.28e-09,9;UBERON:0001015,1.28e-09,9;UBERON:0002329,1.28e-09,9;UBERON:0003082,1.28e-09,9;UBERON:0003059,1.28e-09,9;UBERON:0007282,1.28e-09,9;UBERON:0004290,1.28e-09,9;UBERON:0009618,1.28e-09,9;UBERON:0000383,1.03e-08,10;UBERON:0007524,5.67e-08,11;UBERON:0003077,5.67e-08,11;UBERON:0007285,5.67e-08,11 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,2.02196133825892,0.332469290716985,1.83752420636132,7.11503772252743,7.0320181007142,5.75876118371178,15.2940186888064,6.83045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0,0,0,0,0,0,0.169978429993855,0.839708713941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr9:121223913..121223935,- | |||
}} |
Revision as of 17:11, 14 September 2013
Short description: | p@chr9:121223913..121223935, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121223913..121223935, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.86e-12 | 3 |
lining cell | 4.59e-10 | 1 |
meso-epithelial cell | 4.59e-10 | 1 |
endothelial cell | 4.59e-10 | 1 |
endothelial cell of sinusoid | 4.59e-10 | 1 |
endothelial cell of hepatic sinusoid | 4.59e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.28e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.59e-10 | 1 |
hepatic sinusoid | 4.59e-10 | 1 |
parenchyma | 4.59e-10 | 1 |
abdomen blood vessel | 4.59e-10 | 1 |
sinusoid | 4.59e-10 | 1 |
digestive system duct | 4.59e-10 | 1 |
abdominal segment blood vessel | 4.59e-10 | 1 |
trunk blood vessel | 4.59e-10 | 1 |
liver parenchyma | 4.59e-10 | 1 |
liver lobule | 4.59e-10 | 1 |
biliary system | 4.59e-10 | 1 |
biliary tree | 4.59e-10 | 1 |
biliary bud | 4.59e-10 | 1 |
hepatic duct | 4.59e-10 | 1 |
skeletal muscle tissue | 1.28e-09 | 9 |
striated muscle tissue | 1.28e-09 | 9 |
muscle tissue | 1.28e-09 | 9 |
multilaminar epithelium | 1.28e-09 | 9 |
epithelial vesicle | 1.28e-09 | 9 |
musculature | 1.28e-09 | 9 |
somite | 1.28e-09 | 9 |
myotome | 1.28e-09 | 9 |
presomitic mesoderm | 1.28e-09 | 9 |
presumptive segmental plate | 1.28e-09 | 9 |
dermomyotome | 1.28e-09 | 9 |
trunk paraxial mesoderm | 1.28e-09 | 9 |
musculature of body | 1.03e-08 | 10 |
dense mesenchyme tissue | 5.67e-08 | 11 |
paraxial mesoderm | 5.67e-08 | 11 |
presumptive paraxial mesoderm | 5.67e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.68e-27 | 3 |
muscle cancer | 1.68e-27 | 3 |
organ system cancer | 4.07e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.