FFCP PHASE1:Mm9::chr1:172040556..172040571,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18214|HGNC=|UniProt=Q62371|association_with_transcript=60bp_to_ENSMUST00000027985_5end|description=CAGE_peak_7_at_Ddr2_5end|id=chr1:172040556..172040571,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.07e-11,3;CL:0000359,1.07e-11,3;CL:0002539,1.07e-11,3;CL:0000514,1.07e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.07e-11,3;UBERON:0004237,1.07e-11,3;UBERON:0004695,1.07e-11,3;UBERON:0002111,1.07e-11,3;UBERON:0004178,1.07e-11,3;UBERON:0000947,5.31e-09,4;UBERON:0001637,5.31e-09,4;UBERON:0004573,5.31e-09,4;UBERON:0003509,5.31e-09,4;UBERON:0004571,5.31e-09,4;UBERON:0010191,5.31e-09,4;UBERON:0004572,5.31e-09,4;UBERON:0000055,2.25e-07,5;UBERON:0007500,2.25e-07,5;UBERON:0001981,2.25e-07,5;UBERON:0002049,2.25e-07,5;UBERON:0007798,2.25e-07,5;UBERON:0004537,2.25e-07,5;UBERON:0006965,2.25e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.82478476195126,0.367093504323363,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,3.57903677413921,2.07828803682295,2.12003744706204,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.883366073841574,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0.243206428637567,0.877199924551994,0.439100230582101,0.536825675041487,0,0,0,0,0,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0.470996183524124,0.616985819609003,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0,0.162964976442026,0,0,1.00503754465089,0.476087281772027,0.585400943573396,0.315270288212382,0.8858587585951,0.956728611944923,0.983179888294428,1.89953480052485,1.73578870297814,0,0,0,0.275936746304732,0.160550589987792,0,1.14754461763673,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.482503399425247,0.358117032009409,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0|short_description=p7@Ddr2}} | ||
|EntrezGene=18214 | |||
|HGNC= | |||
|UniProt=Q62371 | |||
|association_with_transcript=60bp_to_ENSMUST00000027985_5end | |||
|description=CAGE_peak_7_at_Ddr2_5end | |||
|id=chr1:172040556..172040571,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.07e-11,3;CL:0000359,1.07e-11,3;CL:0002539,1.07e-11,3;CL:0000514,1.07e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.07e-11,3;UBERON:0004237,1.07e-11,3;UBERON:0004695,1.07e-11,3;UBERON:0002111,1.07e-11,3;UBERON:0004178,1.07e-11,3;UBERON:0000947,5.31e-09,4;UBERON:0001637,5.31e-09,4;UBERON:0004573,5.31e-09,4;UBERON:0003509,5.31e-09,4;UBERON:0004571,5.31e-09,4;UBERON:0010191,5.31e-09,4;UBERON:0004572,5.31e-09,4;UBERON:0000055,2.25e-07,5;UBERON:0007500,2.25e-07,5;UBERON:0001981,2.25e-07,5;UBERON:0002049,2.25e-07,5;UBERON:0007798,2.25e-07,5;UBERON:0004537,2.25e-07,5;UBERON:0006965,2.25e-07,5 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.82478476195126,0.367093504323363,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,3.57903677413921,2.07828803682295,2.12003744706204,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.883366073841574,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0.243206428637567,0.877199924551994,0.439100230582101,0.536825675041487,0,0,0,0,0,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0.470996183524124,0.616985819609003,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0,0.162964976442026,0,0,1.00503754465089,0.476087281772027,0.585400943573396,0.315270288212382,0.8858587585951,0.956728611944923,0.983179888294428,1.89953480052485,1.73578870297814,0,0,0,0.275936746304732,0.160550589987792,0,1.14754461763673,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.482503399425247,0.358117032009409,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p7@Ddr2 | |||
}} |
Revision as of 19:37, 13 September 2013
Short description: | p7@Ddr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ddr2_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENSMUST00000027985_5end |
EntrezGene: | Ddr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.07e-11 | 3 |
vascular associated smooth muscle cell | 1.07e-11 | 3 |
aortic smooth muscle cell | 1.07e-11 | 3 |
smooth muscle myoblast | 1.07e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.07e-11 | 3 |
blood vessel smooth muscle | 1.07e-11 | 3 |
arterial system smooth muscle | 1.07e-11 | 3 |
artery smooth muscle tissue | 1.07e-11 | 3 |
aorta smooth muscle tissue | 1.07e-11 | 3 |
aorta | 5.31e-09 | 4 |
artery | 5.31e-09 | 4 |
systemic artery | 5.31e-09 | 4 |
arterial blood vessel | 5.31e-09 | 4 |
systemic arterial system | 5.31e-09 | 4 |
aortic system | 5.31e-09 | 4 |
arterial system | 5.31e-09 | 4 |
vessel | 2.25e-07 | 5 |
epithelial tube open at both ends | 2.25e-07 | 5 |
blood vessel | 2.25e-07 | 5 |
vasculature | 2.25e-07 | 5 |
vascular system | 2.25e-07 | 5 |
blood vasculature | 2.25e-07 | 5 |
vascular cord | 2.25e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.