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FFCP PHASE1:Mm9::chr13:115891887..115891923,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=109700|HGNC=|MCL_coexpression_id=2819|UniProt=Q3URV2|association_with_transcript=215bp_to_ENSMUST00000036276_5end|description=CAGE_peak_2_at_Itga1_5end|id=chr13:115891887..115891923,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.26e-08!14;UBERON:0000117!3.26e-08!14;UBERON:0000171!3.26e-08!14;UBERON:0000170!3.26e-08!14;UBERON:0005597!3.26e-08!14;UBERON:0000118!3.26e-08!14;UBERON:0005153!4.13e-08!17;UBERON:0005157!1.62e-07!27;UBERON:0004872!4.23e-07!33;UBERON:0009569!7.53e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.75e-10,20;UBERON:0002048,1.06e-08,14;UBERON:0000117,1.06e-08,14;UBERON:0000171,1.06e-08,14;UBERON:0000170,1.06e-08,14;UBERON:0005597,1.06e-08,14;UBERON:0000118,1.06e-08,14;UBERON:0005153,1.36e-08,17;UBERON:0002100,1.15e-07,90;UBERON:0004872,1.65e-07,33;UBERON:0005177,2.54e-07,79;UBERON:0009569,3.99e-07,66;UBERON:0004535,5.32e-07,23;UBERON:0001009,5.32e-07,23|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,3.23164502574065,0,0,1.91990907352088,1.37645568640302,0.57423196411502,0.86152399231815,0.215471232685889,2.66032787238923,1.51218077855958,0.665191531965914,0,0.61506478758457,0,0.577703239502549,1.16364251750945,1.22501613757421,0,0,0,0,0,0,5.03587271902309,4.05507724878058,2.0190142737785,1.56478268869608,0.872100625521786,1.31811709640683,3.11087838518853,0.419959264876088,0,0,0,0,7.46052364504246,12.6074713573053,6.70373719960675,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.630974884054146,0.285650984403804,0.441737081903227,0,0,0.919218786610021,1.10115880999389,0.893811366596314,0.153606533256243,0,0.274462930807229,0,0,0.56276261003168,0.45839474333043,1.76777151284201,0.569486723196412,0.559198337475902,0.151452386666368,0.604572480854284,12.4641730141721,5.16254326188832,0,1.61910957491345,3.24888208723835,2.68816132258401,5.05599912474307,6.13549161281008,4.93593408745451,4.24007489412408,0.14084341977668,25.6652954828636,43.3168907501298,14.2213340630666,0,0,0,2.51204535381932,5.95557132388495,2.3750742250372,0.520455980298408,0.913396434936424,1.61430848079241,2.11011696773672,2.11659672844269,2.38766523526383,5.43828929015623,20.3885093257075,0.884610551949874,4.36770494858005,4.63767188766826,4.363877278217,7.45567044872489,1.46390398505774,0.628340120440365,5.8755122697976,0.239630249011841,1.19980546198682,0.635351135365324,1.04853447583376,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,2.54598409625791,6.96679035416521,1.26361379216837,1.26265113531884,0.130120442962704,0.689706313300419,0.360124259610698,1.65775299619287,1.56483948048054,0.768682321709099,1.87403449119458,1.55222022443409,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,1.66828349535359,3.48252166522167,2.26360350048738,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,3.31401236056803,1.40715635988658,2.16074473753218,4.26140524053378,3.93528463494808,4.47374627373397,6.27841650826101,8.58474884478781,5.83826711835847,3.12663714835613,8.04420573987567,9.80932595504854,8.62579925809461,8.56245449635098,10.3338942445486,0.841159794256509,0.514523061896422,0.660837565967596,3.43785736662608,0.213288250535234,1.85789337488351,3.35055399437443,7.66397393568702,4.22518283305254,4.37518940058886,6.64340686162316,8.39964669092456,5.02670417600539,9.15199771389294,8.18849165900304,3.59527763461689,7.3486936957396,6.77080329064848,0.569003702859245,1.14248512609729,3.38123207019241,3.66572390121566,4.84881217919064,5.6810014111158,11.4458132194906,15.6466756858378,14.7578804170892,13.2034965396327,4.44678940630723,0.500535317148282,0.393117990226406,0.899448449539415,0.202860121388503,1.20588579876208,1.52775511068852,4.60313819921297,2.10775794807546,4.66754402419738,7.18841032636773,7.81495990103857,6.86482880852033,4.79899868099512,4.12614051100398,7.23665282045051,20.5076041084931,2.4633883530163,6.35563408123901,4.75286240170527,8.91822943496308,12.5629693081362,18.8054476299951,10.3420833364633,28.5319610832206,26.1328333785554,22.6425771493632,28.1844901311069,24.6939524068231,31.099547595025,0,0,2.95058563811422,5.51873492609465,0.481651769963376,1.28932855251423,0,8.33154059774431,8.51872192423893,11.7131623288992,13.5716740571663,4.06246956519338,6.01556420022464,4.52922449262132,3.23848561339915,5.26060544240361,6.32460444714438,0.642642632843614,7.80670468645477,0.712262414669021,2.76907830901079,4.45419332025846,0,0.728341908464944,1.209294227859,0.943025398779491,2.06711325016541,3.99665692327106,4.9101375701962,3.99887102425256,5.34746067577082,7.26884543252377,2.10837217149998,3.09406629744561,0,0.540183282093931,0.388076051348264,1.50035924522115,1.41872186913819,1.42695054081656,0.493647061806363,0.913394847343798,3.28540391289194,2.1183207086382,3.52845436887939,2.4732937941222,2.74489525383039,2.77439454669517,3.22305328808468,2.62625439592098,5.82961673259701,0.556275906031529,3.2465467351592,3.30218988741156,9.07453184111587,3.57900068308913,2.1871076435364,2.74533807847827,0,0,0,1.90934123603023,0.790839983952838,4.87966721104437,7.02034715341708,7.52717865652087,12.6650286972783,20.4993806504927,21.9858192229394,18.8464278228501,11.4061176496778,3.10669656543463,0,0.747582730219894,0.330916980914195,1.55560950675238,1.16243841129958,0.844780627453891,2.22978753426933,2.73429208172295,0.419437377702843,0.966336483304024,1.72818003754719,0.948033361884535,0.202725215290164,1.02710957164827,0.77952493786677,0.716106782669926,0.596044064343795,0.360586348559907,0.443068581523732,0.807731599585181,0.457240839929999,0.705783295957884,0.487289403698762,0.673482891482306,0.701261413089414,3.40095575422817,0,0.0897138566094757,0,62.2070492783653,22.709579529593,4.39563898241436,1.92931541171159,7.02200945649509,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.853668028770671,3.40349403895612,0.628839487883947,2.02227859295016,5.33392146723877,6.79915688888351,3.53011130550997,6.82282471762253,6.33698249725599,4.71565853465191,4.775716880964,4.9939618875798,3.96304735793732,3.81034953026459,4.51948871184936,5.40145817298374,6.1812885120496,7.35994600671987,4.4573002810104,4.79184676630211,5.00715998889374,6.1045494985578,5.55245344450451,5.753793336634,6.0366231048015,6.31367307450823,5.02475221229689,6.73370725989286,4.86403574309114,4.33419722452479,9.00308294973317,3.87342102964915,5.98010494041538,1.99848462350357,5.38042699424439,6.01638951335235,5.35607329792761,6.83833399270498,11.3615239454007|short_description=p2@Itga1}}
|EntrezGene=109700
|HGNC=
|MCL_coexpression_id=2819
|UniProt=Q3URV2
|association_with_transcript=215bp_to_ENSMUST00000036276_5end
|description=CAGE_peak_2_at_Itga1_5end
|id=chr13:115891887..115891923,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!3.26e-08!14;UBERON:0000117!3.26e-08!14;UBERON:0000171!3.26e-08!14;UBERON:0000170!3.26e-08!14;UBERON:0005597!3.26e-08!14;UBERON:0000118!3.26e-08!14;UBERON:0005153!4.13e-08!17;UBERON:0005157!1.62e-07!27;UBERON:0004872!4.23e-07!33;UBERON:0009569!7.53e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.75e-10,20;UBERON:0002048,1.06e-08,14;UBERON:0000117,1.06e-08,14;UBERON:0000171,1.06e-08,14;UBERON:0000170,1.06e-08,14;UBERON:0005597,1.06e-08,14;UBERON:0000118,1.06e-08,14;UBERON:0005153,1.36e-08,17;UBERON:0002100,1.15e-07,90;UBERON:0004872,1.65e-07,33;UBERON:0005177,2.54e-07,79;UBERON:0009569,3.99e-07,66;UBERON:0004535,5.32e-07,23;UBERON:0001009,5.32e-07,23
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,3.23164502574065,0,0,1.91990907352088,1.37645568640302,0.57423196411502,0.86152399231815,0.215471232685889,2.66032787238923,1.51218077855958,0.665191531965914,0,0.61506478758457,0,0.577703239502549,1.16364251750945,1.22501613757421,0,0,0,0,0,0,5.03587271902309,4.05507724878058,2.0190142737785,1.56478268869608,0.872100625521786,1.31811709640683,3.11087838518853,0.419959264876088,0,0,0,0,7.46052364504246,12.6074713573053,6.70373719960675,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.630974884054146,0.285650984403804,0.441737081903227,0,0,0.919218786610021,1.10115880999389,0.893811366596314,0.153606533256243,0,0.274462930807229,0,0,0.56276261003168,0.45839474333043,1.76777151284201,0.569486723196412,0.559198337475902,0.151452386666368,0.604572480854284,12.4641730141721,5.16254326188832,0,1.61910957491345,3.24888208723835,2.68816132258401,5.05599912474307,6.13549161281008,4.93593408745451,4.24007489412408,0.14084341977668,25.6652954828636,43.3168907501298,14.2213340630666,0,0,0,2.51204535381932,5.95557132388495,2.3750742250372,0.520455980298408,0.913396434936424,1.61430848079241,2.11011696773672,2.11659672844269,2.38766523526383,5.43828929015623,20.3885093257075,0.884610551949874,4.36770494858005,4.63767188766826,4.363877278217,7.45567044872489,1.46390398505774,0.628340120440365,5.8755122697976,0.239630249011841,1.19980546198682,0.635351135365324,1.04853447583376,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,2.54598409625791,6.96679035416521,1.26361379216837,1.26265113531884,0.130120442962704,0.689706313300419,0.360124259610698,1.65775299619287,1.56483948048054,0.768682321709099,1.87403449119458,1.55222022443409,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,1.66828349535359,3.48252166522167,2.26360350048738,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,3.31401236056803,1.40715635988658,2.16074473753218,4.26140524053378,3.93528463494808,4.47374627373397,6.27841650826101,8.58474884478781,5.83826711835847,3.12663714835613,8.04420573987567,9.80932595504854,8.62579925809461,8.56245449635098,10.3338942445486,0.841159794256509,0.514523061896422,0.660837565967596,3.43785736662608,0.213288250535234,1.85789337488351,3.35055399437443,7.66397393568702,4.22518283305254,4.37518940058886,6.64340686162316,8.39964669092456,5.02670417600539,9.15199771389294,8.18849165900304,3.59527763461689,7.3486936957396,6.77080329064848,0.569003702859245,1.14248512609729,3.38123207019241,3.66572390121566,4.84881217919064,5.6810014111158,11.4458132194906,15.6466756858378,14.7578804170892,13.2034965396327,4.44678940630723,0.500535317148282,0.393117990226406,0.899448449539415,0.202860121388503,1.20588579876208,1.52775511068852,4.60313819921297,2.10775794807546,4.66754402419738,7.18841032636773,7.81495990103857,6.86482880852033,4.79899868099512,4.12614051100398,7.23665282045051,20.5076041084931,2.4633883530163,6.35563408123901,4.75286240170527,8.91822943496308,12.5629693081362,18.8054476299951,10.3420833364633,28.5319610832206,26.1328333785554,22.6425771493632,28.1844901311069,24.6939524068231,31.099547595025,0,0,2.95058563811422,5.51873492609465,0.481651769963376,1.28932855251423,0,8.33154059774431,8.51872192423893,11.7131623288992,13.5716740571663,4.06246956519338,6.01556420022464,4.52922449262132,3.23848561339915,5.26060544240361,6.32460444714438,0.642642632843614,7.80670468645477,0.712262414669021,2.76907830901079,4.45419332025846,0,0.728341908464944,1.209294227859,0.943025398779491,2.06711325016541,3.99665692327106,4.9101375701962,3.99887102425256,5.34746067577082,7.26884543252377,2.10837217149998,3.09406629744561,0,0.540183282093931,0.388076051348264,1.50035924522115,1.41872186913819,1.42695054081656,0.493647061806363,0.913394847343798,3.28540391289194,2.1183207086382,3.52845436887939,2.4732937941222,2.74489525383039,2.77439454669517,3.22305328808468,2.62625439592098,5.82961673259701,0.556275906031529,3.2465467351592,3.30218988741156,9.07453184111587,3.57900068308913,2.1871076435364,2.74533807847827,0,0,0,1.90934123603023,0.790839983952838,4.87966721104437,7.02034715341708,7.52717865652087,12.6650286972783,20.4993806504927,21.9858192229394,18.8464278228501,11.4061176496778,3.10669656543463,0,0.747582730219894,0.330916980914195,1.55560950675238,1.16243841129958,0.844780627453891,2.22978753426933,2.73429208172295,0.419437377702843,0.966336483304024,1.72818003754719,0.948033361884535,0.202725215290164,1.02710957164827,0.77952493786677,0.716106782669926,0.596044064343795,0.360586348559907,0.443068581523732,0.807731599585181,0.457240839929999,0.705783295957884,0.487289403698762,0.673482891482306,0.701261413089414,3.40095575422817,0,0.0897138566094757,0,62.2070492783653,22.709579529593,4.39563898241436,1.92931541171159,7.0220094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|short_description=p2@Itga1
}}

Revision as of 23:56, 12 September 2013

Short description:p2@Itga1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Itga1_5end
Coexpression cluster:MCL_coexpression_mm9:2819
Association with transcript: 215bp_to_ENSMUST00000036276_5end
EntrezGene:Itga1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Itga1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H120.39
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E35.84
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G19.81
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A58.19
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G75.68
kidney, neonate N10.CNhs11206.758-6D511.45
kidney, neonate N20.CNhs11113.832-19I115.65
kidney, neonate N25.CNhs11122.1353-25F314.76
kidney, neonate N30.CNhs11203.1385-42H113.20
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B120.51
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A612.56
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C610.34
lung, neonate N06.CNhs11212.683-20E528.53
lung, neonate N07.CNhs11111.715-19A326.13
lung, neonate N10.CNhs11219.750-23E622.64
lung, neonate N20.CNhs11109.822-18A428.18
lung, neonate N25.CNhs11119.1359-25C724.69
lung, neonate N30.CNhs11133.1394-42H231.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.57
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D47.02
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B820.50
stomach, neonate N07.CNhs11210.718-18A921.99
stomach, neonate N25.CNhs11104.1355-25E418.85
stomach, neonate N30.CNhs11134.1386-42I111.41
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E462.21
uterus, adult pregnant day19.CNhs10497.590-15F522.71
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial fold2.75e-1020
lung1.06e-0814
respiratory tube1.06e-0814
respiration organ1.06e-0814
pair of lungs1.06e-0814
lung primordium1.06e-0814
lung bud1.06e-0814
epithelial bud1.36e-0817
trunk1.15e-0790
splanchnic layer of lateral plate mesoderm1.65e-0733
trunk region element2.54e-0779
subdivision of trunk3.99e-0766
cardiovascular system5.32e-0723
circulatory system5.32e-0723







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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