FFCP PHASE1:Mm9::chr1:127574253..127574264,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=230|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:127574253..127574264,+|id=chr1:127574253..127574264,+|ontology_enrichment_celltype=CL:0000680!3.30e-12!6;CL:0000183!3.30e-12!6;CL:0000187!3.30e-12!6;CL:0000056!3.30e-12!6;CL:0000222!2.66e-10!7;CL:0000355!9.17e-08!9;CL:0000192!5.18e-07!3;CL:0000359!5.18e-07!3;CL:0002539!5.18e-07!3;CL:0000514!5.18e-07!3;CL:0002494!8.62e-07!3;CL:0000737!8.62e-07!3;CL:0000746!8.62e-07!3;CL:0000513!8.62e-07!3|ontology_enrichment_celltype_v019_2=CL:0000680,1.99e-52,6;CL:0000187,1.99e-52,6;CL:0000056,1.99e-52,6;CL:0000222,4.95e-45,7;CL:0000192,1.17e-38,3;CL:0000359,1.17e-38,3;CL:0002539,1.17e-38,3;CL:0000514,1.17e-38,3;CL:0000355,3.69e-35,9;CL:0002494,1.59e-17,3;CL:0000737,1.59e-17,3;CL:0000746,1.59e-17,3;CL:0000513,1.59e-17,3;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.47e-20!23;UBERON:0001009!1.47e-20!23;UBERON:0004872!1.68e-19!33;UBERON:0007100!2.68e-15!18;UBERON:0000948!2.68e-15!18;UBERON:0005498!2.68e-15!18;UBERON:0004140!2.68e-15!18;UBERON:0009881!2.68e-15!18;UBERON:0004141!2.68e-15!18;UBERON:0003084!2.68e-15!18;UBERON:0007005!2.68e-15!18;UBERON:0004139!2.68e-15!18;UBERON:0004291!2.68e-15!18;UBERON:0003914!4.77e-15!47;UBERON:0003103!2.25e-09!43;UBERON:0000947!2.12e-08!4;UBERON:0001637!2.12e-08!4;UBERON:0003509!2.12e-08!4;UBERON:0004573!2.12e-08!4;UBERON:0004571!2.12e-08!4;UBERON:0010191!2.12e-08!4;UBERON:0004572!2.12e-08!4;UBERON:0001134!9.17e-08!9;UBERON:0002036!9.17e-08!9;UBERON:0002385!9.17e-08!9;UBERON:0000486!9.17e-08!9;UBERON:0001015!9.17e-08!9;UBERON:0004290!9.17e-08!9;UBERON:0003082!9.17e-08!9;UBERON:0001135!5.18e-07!3;UBERON:0004237!5.18e-07!3;UBERON:0004695!5.18e-07!3;UBERON:0002111!5.18e-07!3;UBERON:0004178!5.18e-07!3;UBERON:0000383!7.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.17e-38,3;UBERON:0004237,1.17e-38,3;UBERON:0004695,1.17e-38,3;UBERON:0002111,1.17e-38,3;UBERON:0004178,1.17e-38,3;UBERON:0001134,3.69e-35,9;UBERON:0002036,3.69e-35,9;UBERON:0002385,3.69e-35,9;UBERON:0000486,3.69e-35,9;UBERON:0007503,3.69e-35,9;UBERON:0001015,3.69e-35,9;UBERON:0002329,3.69e-35,9;UBERON:0003082,3.69e-35,9;UBERON:0003059,3.69e-35,9;UBERON:0007282,3.69e-35,9;UBERON:0004290,3.69e-35,9;UBERON:0009618,3.69e-35,9;UBERON:0000383,1.06e-31,10;UBERON:0000947,3.12e-29,4;UBERON:0001637,3.12e-29,4;UBERON:0004573,3.12e-29,4;UBERON:0003509,3.12e-29,4;UBERON:0004571,3.12e-29,4;UBERON:0010191,3.12e-29,4;UBERON:0004572,3.12e-29,4;UBERON:0007524,7.21e-29,11;UBERON:0003077,7.21e-29,11;UBERON:0007285,7.21e-29,11;UBERON:0000055,1.45e-23,5;UBERON:0007500,1.45e-23,5;UBERON:0001981,1.45e-23,5;UBERON:0002049,1.45e-23,5;UBERON:0007798,1.45e-23,5;UBERON:0004537,1.45e-23,5;UBERON:0006965,1.45e-23,5;UBERON:0004535,4.90e-14,23;UBERON:0001009,4.90e-14,23;UBERON:0001255,1.55e-13,1;UBERON:0001556,1.55e-13,1;UBERON:0005256,2.89e-10,45;UBERON:0002204,3.52e-10,32;UBERON:0004872,7.02e-10,33;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0000490,5.00e-07,66;UBERON:0003914,5.25e-07,47|phase1_expression=0,1.04692622291808,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.68822784320151,0.57423196411502,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,4.76471576731718,4.9557623083654,0,0,0,0,0,0,0,0,0,1.54355661621568,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr1:127574253..127574264,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:127574253..127574264,+ | |||
|id=chr1:127574253..127574264,+ | |||
|ontology_enrichment_celltype=CL:0000680!3.30e-12!6;CL:0000183!3.30e-12!6;CL:0000187!3.30e-12!6;CL:0000056!3.30e-12!6;CL:0000222!2.66e-10!7;CL:0000355!9.17e-08!9;CL:0000192!5.18e-07!3;CL:0000359!5.18e-07!3;CL:0002539!5.18e-07!3;CL:0000514!5.18e-07!3;CL:0002494!8.62e-07!3;CL:0000737!8.62e-07!3;CL:0000746!8.62e-07!3;CL:0000513!8.62e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.99e-52,6;CL:0000187,1.99e-52,6;CL:0000056,1.99e-52,6;CL:0000222,4.95e-45,7;CL:0000192,1.17e-38,3;CL:0000359,1.17e-38,3;CL:0002539,1.17e-38,3;CL:0000514,1.17e-38,3;CL:0000355,3.69e-35,9;CL:0002494,1.59e-17,3;CL:0000737,1.59e-17,3;CL:0000746,1.59e-17,3;CL:0000513,1.59e-17,3;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.47e-20!23;UBERON:0001009!1.47e-20!23;UBERON:0004872!1.68e-19!33;UBERON:0007100!2.68e-15!18;UBERON:0000948!2.68e-15!18;UBERON:0005498!2.68e-15!18;UBERON:0004140!2.68e-15!18;UBERON:0009881!2.68e-15!18;UBERON:0004141!2.68e-15!18;UBERON:0003084!2.68e-15!18;UBERON:0007005!2.68e-15!18;UBERON:0004139!2.68e-15!18;UBERON:0004291!2.68e-15!18;UBERON:0003914!4.77e-15!47;UBERON:0003103!2.25e-09!43;UBERON:0000947!2.12e-08!4;UBERON:0001637!2.12e-08!4;UBERON:0003509!2.12e-08!4;UBERON:0004573!2.12e-08!4;UBERON:0004571!2.12e-08!4;UBERON:0010191!2.12e-08!4;UBERON:0004572!2.12e-08!4;UBERON:0001134!9.17e-08!9;UBERON:0002036!9.17e-08!9;UBERON:0002385!9.17e-08!9;UBERON:0000486!9.17e-08!9;UBERON:0001015!9.17e-08!9;UBERON:0004290!9.17e-08!9;UBERON:0003082!9.17e-08!9;UBERON:0001135!5.18e-07!3;UBERON:0004237!5.18e-07!3;UBERON:0004695!5.18e-07!3;UBERON:0002111!5.18e-07!3;UBERON:0004178!5.18e-07!3;UBERON:0000383!7.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.17e-38,3;UBERON:0004237,1.17e-38,3;UBERON:0004695,1.17e-38,3;UBERON:0002111,1.17e-38,3;UBERON:0004178,1.17e-38,3;UBERON:0001134,3.69e-35,9;UBERON:0002036,3.69e-35,9;UBERON:0002385,3.69e-35,9;UBERON:0000486,3.69e-35,9;UBERON:0007503,3.69e-35,9;UBERON:0001015,3.69e-35,9;UBERON:0002329,3.69e-35,9;UBERON:0003082,3.69e-35,9;UBERON:0003059,3.69e-35,9;UBERON:0007282,3.69e-35,9;UBERON:0004290,3.69e-35,9;UBERON:0009618,3.69e-35,9;UBERON:0000383,1.06e-31,10;UBERON:0000947,3.12e-29,4;UBERON:0001637,3.12e-29,4;UBERON:0004573,3.12e-29,4;UBERON:0003509,3.12e-29,4;UBERON:0004571,3.12e-29,4;UBERON:0010191,3.12e-29,4;UBERON:0004572,3.12e-29,4;UBERON:0007524,7.21e-29,11;UBERON:0003077,7.21e-29,11;UBERON:0007285,7.21e-29,11;UBERON:0000055,1.45e-23,5;UBERON:0007500,1.45e-23,5;UBERON:0001981,1.45e-23,5;UBERON:0002049,1.45e-23,5;UBERON:0007798,1.45e-23,5;UBERON:0004537,1.45e-23,5;UBERON:0006965,1.45e-23,5;UBERON:0004535,4.90e-14,23;UBERON:0001009,4.90e-14,23;UBERON:0001255,1.55e-13,1;UBERON:0001556,1.55e-13,1;UBERON:0005256,2.89e-10,45;UBERON:0002204,3.52e-10,32;UBERON:0004872,7.02e-10,33;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0000490,5.00e-07,66;UBERON:0003914,5.25e-07,47 | |||
|phase1_expression=0,1.04692622291808,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.68822784320151,0.57423196411502,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,4.76471576731718,4.9557623083654,0,0,0,0,0,0,0,0,0,1.54355661621568,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:127574253..127574264,+ | |||
}} |
Revision as of 18:40, 13 September 2013
Short description: | p@chr1:127574253..127574264, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:127574253..127574264, + |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.99e-52 | 6 |
muscle cell | 1.99e-52 | 6 |
myoblast | 1.99e-52 | 6 |
mesodermal cell | 4.95e-45 | 7 |
smooth muscle cell | 1.17e-38 | 3 |
vascular associated smooth muscle cell | 1.17e-38 | 3 |
aortic smooth muscle cell | 1.17e-38 | 3 |
smooth muscle myoblast | 1.17e-38 | 3 |
multi-potent skeletal muscle stem cell | 3.69e-35 | 9 |
cardiocyte | 1.59e-17 | 3 |
striated muscle cell | 1.59e-17 | 3 |
cardiac muscle cell | 1.59e-17 | 3 |
cardiac muscle myoblast | 1.59e-17 | 3 |
electrically responsive cell | 2.12e-08 | 39 |
electrically active cell | 2.12e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.