FFCP PHASE1:Mm9::chr19:27495871..27495917,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=52874|HGNC=|MCL_coexpression_id=55|UniProt=Q8C0F4|association_with_transcript=55bp_to_uc008hbz.1_5end|description=CAGE_peak_3_at_D19Bwg1357e_5end|id=chr19:27495871..27495917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!5.28e-08!7;UBERON:0006858!5.28e-08!7|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.76e-56,7;UBERON:0006858,1.76e-56,7;UBERON:0003064,2.02e-28,14;UBERON:0005256,6.28e-09,45;UBERON:0005172,3.37e-08,49;UBERON:0005173,3.37e-08,49;UBERON:0002417,3.37e-08,49;UBERON:0000916,3.37e-08,49|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0.34243593645101,0.319088635981346,0,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,0,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0.075726193333184,0,0,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,10.984718290797,3.12273588179045,6.08930956624282,8.99400439298628,6.78251882486802,2.23418543557839,0.753999547978053,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,1.70328102249922,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,0,0,0.412773735926445,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0,0,0,0.209718688851422,0.483168241652012,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.0762068066549998,0.504130925684203,0.194915761479505,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0|short_description=p3@D19Bwg1357e}} | ||
|EntrezGene=52874 | |||
|HGNC= | |||
|MCL_coexpression_id=55 | |||
|UniProt=Q8C0F4 | |||
|association_with_transcript=55bp_to_uc008hbz.1_5end | |||
|description=CAGE_peak_3_at_D19Bwg1357e_5end | |||
|id=chr19:27495871..27495917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!5.28e-08!7;UBERON:0006858!5.28e-08!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.76e-56,7;UBERON:0006858,1.76e-56,7;UBERON:0003064,2.02e-28,14;UBERON:0005256,6.28e-09,45;UBERON:0005172,3.37e-08,49;UBERON:0005173,3.37e-08,49;UBERON:0002417,3.37e-08,49;UBERON:0000916,3.37e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0.34243593645101,0.319088635981346,0,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,0,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0.075726193333184,0,0,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,10.984718290797,3.12273588179045,6.08930956624282,8.99400439298628,6.78251882486802,2.23418543557839,0.753999547978053,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,1.70328102249922,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,0,0,0.412773735926445,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0,0,0,0.209718688851422,0.483168241652012,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.0762068066549998,0.504130925684203,0.194915761479505,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p3@D19Bwg1357e | |||
}} |
Revision as of 17:17, 13 September 2013
Short description: | p3@D19Bwg1357e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_D19Bwg1357e_5end |
Coexpression cluster: | MCL_coexpression_mm9:55 |
Association with transcript: | 55bp_to_uc008hbz.1_5end |
EntrezGene: | D19Bwg1357e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.76e-56 | 7 |
adrenal/interrenal gland | 1.76e-56 | 7 |
intermediate mesoderm | 2.02e-28 | 14 |
trunk mesenchyme | 6.28e-09 | 45 |
abdomen element | 3.37e-08 | 49 |
abdominal segment element | 3.37e-08 | 49 |
abdominal segment of trunk | 3.37e-08 | 49 |
abdomen | 3.37e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.