FFCP PHASE1:Mm9::chr7:80686624..80686644,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=244059|HGNC=|MCL_coexpression_id=298|UniProt=E9PZM4,F7CDZ7,Q3UZW3|association_with_transcript=0bp_to_ENSMUST00000169922,NM_001081345,uc009hrd.2,uc012fmw.1_5end|description=CAGE_peak_1_at_Chd2_5end|id=chr7:80686624..80686644,-|ontology_enrichment_celltype=CL:0000838!9.77e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,9.77e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!5.76e-08!69;UBERON:0004921!5.59e-07!126;UBERON:0004185!5.59e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005911,5.76e-08,69;UBERON:0004921,2.65e-07,114|phase1_expression=44.5213794951327,44.6688521778382,43.2249277420059,81.9678012641509,73.1307765721667,31.2255445756115,21.2587502941928,155.077111453333,145.29396126052,138.56619958262,38.8664787871896,31.3504584851672,173.426339420311,186.030616347626,30.9792078488566,50.011391045287,38.4759032970481,106.941674056443,127.242194386126,92.5169440919706,27.4689827187955,45.9717104060099,46.7547622558694,16.1592347021341,13.9939661450974,26.4146703492909,19.3842898271584,26.9339040857361,20.9025761402011,24.4469225867133,12.4169085966971,22.2260735710871,11.6862309641068,31.6963362030877,54.3041045132396,29.0910629377362,50.2256616405428,138.952501404653,68.7575103180944,125.122174809738,214.116261643289,137.292142476648,120.892077904757,22.1578399637016,21.5932863497566,20.74078299427,14.0830441982647,6.32272953503295,5.93152693383074,12.4435135407541,6.99932108126813,7.18762821824858,148.152041148981,203.826761905188,221.821907434026,18.5226793945882,20.057340795713,17.532851137433,13.3528864167335,8.46385566835253,10.1413024560989,10.8430250262122,16.8966011261116,13.0485459005803,12.8552627133707,9.2362414942993,6.5912024314049,7.68436610643109,24.4707485048007,14.7156472781543,19.5602214056785,8.85518051651791,10.6016899656774,14.8213867050094,14.5685115947719,15.6267193723704,29.731287869835,18.7700386985226,23.6554061214615,12.5291973343684,11.9848813119157,13.022834263919,13.959149950069,19.1339287410771,20.0165704587621,17.3830865429464,17.2269733766915,10.9975673036927,12.1161909333094,25.2409010756664,64.3499164917725,18.9293252935905,8.83962733820076,10.2543606411185,31.1892680374881,24.6414787903535,19.9431076587088,13.2935651610885,4.67614808285164,6.00677276667578,33.2390470672966,23.0987659345772,20.3844191765317,7.11066703153331,18.185247444942,18.4952701796822,17.6933555755174,26.9473956136982,200.676859826558,24.4929529456961,15.9606500624845,19.485790611977,20.9860102503013,23.2112866451039,35.5117895549829,15.3313241422204,25.2138867089061,33.9808488761792,34.4998115260451,25.8826959915855,29.8136049921531,35.3958934788712,59.6453635897991,48.6016123039168,58.2261844941405,31.6766748458653,172.054518790502,56.9907594443737,121.352066854777,27.4116870110826,26.992535566299,15.4554853098823,27.8118912307642,27.105838477015,23.4800490352303,22.064811777215,35.2364198922094,34.5851378296059,41.193809624689,37.6690922036788,30.7084245391981,22.0706020256134,23.9482632641114,31.195897291993,35.6511255552958,36.3842965608973,29.4223415117549,47.3427168452399,26.2992951378068,39.712276835242,32.9028602186584,19.9468116509093,43.3753708791933,38.6559904839605,40.9506451451808,28.8599686886815,50.5593494865529,43.2344483952721,63.6526238646127,28.1691050648283,31.4264920374669,29.5301780796064,31.2503050972478,36.0078544097749,38.4125111089572,34.4150238230604,25.2176997315642,53.8288228312651,28.4688540350321,49.5785741518868,37.6159276292771,32.3101972209984,25.4678133737619,35.1620817152174,27.9685631590289,15.4356918568927,52.5365864944239,32.2629691329524,24.9547253126224,35.0677374509262,29.5106486427594,44.9754259910054,34.6909748397998,33.2894845696978,37.9623249235609,23.7166494802576,36.4436052760391,37.4038167437364,30.4143975905827,31.4586793028978,40.2016772766931,41.222243563654,12.7077493638565,30.1616073289684,47.3372489826938,38.4901009627644,31.2263504339877,48.9548022834424,35.9815896237024,32.4742325555125,40.3486730552333,26.0368015874999,27.5700943191048,28.8642032888843,37.3462090715086,28.7823503852613,45.6435273124132,49.9236720687503,40.9947621368086,46.3190781295805,67.7725247919648,25.2596500133035,71.8841032636773,48.0061822492369,27.7713529071959,28.0362554521294,29.6005732311155,32.806159452709,51.7308932466493,19.8965982359009,32.4300303119632,31.7423310399602,31.4484932706593,59.2972151344028,40.2293753097363,34.928922966546,43.3496646292025,42.299755722916,36.993506328537,46.5371813792696,48.5244799043167,54.9666422609744,15.0791283939272,22.3001330365671,33.9317348383135,33.9402197954821,24.2431390881566,20.1604100938589,14.9180800292775,24.9946217932329,16.4064274096453,19.9123759591286,20.4652227846159,18.8785350382516,22.7254647564042,23.7784285862619,19.02610297872,16.6585839009448,24.5078422326845,32.1321316421807,39.7432238583152,20.1214132143998,42.8392703099905,37.4482179147656,23.8941249011933,23.5497217070332,22.6742667723563,30.1768127609437,27.1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| ||
|EntrezGene=244059 | |||
|HGNC= | |||
|MCL_coexpression_id=298 | |||
|UniProt=E9PZM4,F7CDZ7,Q3UZW3 | |||
|association_with_transcript=0bp_to_ENSMUST00000169922,NM_001081345,uc009hrd.2,uc012fmw.1_5end | |||
|description=CAGE_peak_1_at_Chd2_5end | |||
|id=chr7:80686624..80686644,- | |||
|ontology_enrichment_celltype=CL:0000838!9.77e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.77e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!5.76e-08!69;UBERON:0004921!5.59e-07!126;UBERON:0004185!5.59e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,5.76e-08,69;UBERON:0004921,2.65e-07,114 | |||
|phase1_expression=44.5213794951327,44.6688521778382,43.2249277420059,81.9678012641509,73.1307765721667,31.2255445756115,21.2587502941928,155.077111453333,145.29396126052,138.56619958262,38.8664787871896,31.3504584851672,173.426339420311,186.030616347626,30.9792078488566,50.011391045287,38.4759032970481,106.941674056443,127.242194386126,92.5169440919706,27.4689827187955,45.9717104060099,46.7547622558694,16.1592347021341,13.9939661450974,26.4146703492909,19.3842898271584,26.9339040857361,20.9025761402011,24.4469225867133,12.4169085966971,22.2260735710871,11.6862309641068,31.6963362030877,54.3041045132396,29.0910629377362,50.2256616405428,138.952501404653,68.7575103180944,125.122174809738,214.116261643289,137.292142476648,120.892077904757,22.1578399637016,21.5932863497566,20.74078299427,14.0830441982647,6.32272953503295,5.93152693383074,12.4435135407541,6.99932108126813,7.18762821824858,148.152041148981,203.826761905188,221.821907434026,18.5226793945882,20.057340795713,17.532851137433,13.3528864167335,8.46385566835253,10.1413024560989,10.8430250262122,16.8966011261116,13.0485459005803,12.8552627133707,9.2362414942993,6.5912024314049,7.68436610643109,24.4707485048007,14.7156472781543,19.5602214056785,8.85518051651791,10.6016899656774,14.8213867050094,14.5685115947719,15.6267193723704,29.731287869835,18.7700386985226,23.6554061214615,12.5291973343684,11.9848813119157,13.022834263919,13.959149950069,19.1339287410771,20.0165704587621,17.3830865429464,17.2269733766915,10.9975673036927,12.1161909333094,25.2409010756664,64.3499164917725,18.9293252935905,8.83962733820076,10.2543606411185,31.1892680374881,24.6414787903535,19.9431076587088,13.2935651610885,4.67614808285164,6.00677276667578,33.2390470672966,23.0987659345772,20.3844191765317,7.11066703153331,18.185247444942,18.4952701796822,17.6933555755174,26.9473956136982,200.676859826558,24.4929529456961,15.9606500624845,19.485790611977,20.9860102503013,23.2112866451039,35.5117895549829,15.3313241422204,25.2138867089061,33.9808488761792,34.4998115260451,25.8826959915855,29.8136049921531,35.3958934788712,59.6453635897991,48.6016123039168,58.2261844941405,31.6766748458653,172.054518790502,56.9907594443737,121.352066854777,27.4116870110826,26.992535566299,15.4554853098823,27.8118912307642,27.105838477015,23.4800490352303,22.064811777215,35.2364198922094,34.5851378296059,41.193809624689,37.6690922036788,30.7084245391981,22.0706020256134,23.9482632641114,31.195897291993,35.6511255552958,36.3842965608973,29.4223415117549,47.3427168452399,26.2992951378068,39.712276835242,32.9028602186584,19.9468116509093,43.3753708791933,38.6559904839605,40.9506451451808,28.8599686886815,50.5593494865529,43.2344483952721,63.6526238646127,28.1691050648283,31.4264920374669,29.5301780796064,31.2503050972478,36.0078544097749,38.4125111089572,34.4150238230604,25.2176997315642,53.8288228312651,28.4688540350321,49.5785741518868,37.6159276292771,32.3101972209984,25.4678133737619,35.1620817152174,27.9685631590289,15.4356918568927,52.5365864944239,32.2629691329524,24.9547253126224,35.0677374509262,29.5106486427594,44.9754259910054,34.6909748397998,33.2894845696978,37.9623249235609,23.7166494802576,36.4436052760391,37.4038167437364,30.4143975905827,31.4586793028978,40.2016772766931,41.222243563654,12.7077493638565,30.1616073289684,47.3372489826938,38.4901009627644,31.2263504339877,48.9548022834424,35.9815896237024,32.4742325555125,40.3486730552333,26.0368015874999,27.5700943191048,28.8642032888843,37.3462090715086,28.7823503852613,45.6435273124132,49.9236720687503,40.9947621368086,46.3190781295805,67.7725247919648,25.2596500133035,71.8841032636773,48.0061822492369,27.7713529071959,28.0362554521294,29.6005732311155,32.806159452709,51.7308932466493,19.8965982359009,32.4300303119632,31.7423310399602,31.4484932706593,59.2972151344028,40.2293753097363,34.928922966546,43.3496646292025,42.299755722916,36.993506328537,46.5371813792696,48.5244799043167,54.9666422609744,15.0791283939272,22.3001330365671,33.9317348383135,33.9402197954821,24.2431390881566,20.1604100938589,14.9180800292775,24.9946217932329,16.4064274096453,19.9123759591286,20.4652227846159,18.8785350382516,22.7254647564042,23.7784285862619,19.02610297872,16.6585839009448,24.5078422326845,32.1321316421807,39.7432238583152,20.1214132143998,42.8392703099905,37.4482179147656,23.8941249011933,23.5497217070332,22.6742667723563,30.1768127609437,27.1677741450311,38.121958345047,32.5619649391959,35.989839218273,28.163292892393,41.4008152895919,32.6797686582496,36.0974401368654,35.0652793926402,31.1505692674167,16.4285528404098,28.935499729265,37.4187892985197,34.7819194324038,30.4415688113924,24.6616608782825,25.3445444708807,30.2919861335263,42.3414524265527,49.6307621353855,80.7322133479528,38.5399590290916,39.7509905530444,46.2877337281073,37.018066251991,23.5490133553347,53.4825856897279,22.0833948720648,35.3721547276149,40.1224813419992,52.0805007617106,49.1873072394024,191.395712173081,174.659412499925,196.382162776086,7.63736494412091,23.092527531422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| |||
|short_description=p1@Chd2 | |||
}} | |||
Revision as of 14:11, 14 September 2013
| Short description: | p1@Chd2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Chd2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:298 |
| Association with transcript: | 0bp_to_ENSMUST00000169922, NM_001081345, uc009hrd.2, uc012fmw.1_5end |
| EntrezGene: | Chd2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 9.77e-07 | 12 |
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelium | 5.76e-08 | 69 |
| subdivision of digestive tract | 2.65e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
