FFCP PHASE1:Mm9::chr9:75256131..75256135,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=433|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:75256131..75256135,+|id=chr9:75256131..75256135,+|ontology_enrichment_celltype=CL:0000084!1.53e-13!11;CL:0000827!1.53e-13!11;CL:0000838!2.66e-12!12;CL:0000063!2.76e-11!66;CL:0000542!2.97e-11!13;CL:0000051!2.97e-11!13;CL:0000988!3.90e-11!32;CL:0002032!3.90e-11!32;CL:0000037!3.90e-11!32;CL:0000566!3.90e-11!32;CL:0000837!3.90e-11!32;CL:0000624!9.61e-11!8;CL:0000893!1.80e-10!6;CL:0002489!1.80e-10!6;CL:0000898!1.80e-10!6;CL:0000809!1.80e-10!6;CL:0000810!1.80e-10!6;CL:0000895!1.80e-10!6;CL:0000808!1.80e-10!6;CL:0000894!1.80e-10!6;CL:0000806!1.80e-10!6;CL:0000807!1.80e-10!6;CL:0000805!1.80e-10!6;CL:0002425!1.80e-10!6;CL:0002436!1.80e-10!6;CL:0002427!1.80e-10!6;CL:0002428!1.80e-10!6;CL:0002429!1.80e-10!6;CL:0002433!1.80e-10!6;CL:0002431!1.80e-10!6;CL:0002432!1.80e-10!6;CL:0002320!1.38e-09!46;CL:0000134!1.38e-09!46;CL:0000791!1.78e-09!9;CL:0000789!1.78e-09!9;CL:0002420!1.78e-09!9;CL:0002419!1.78e-09!9;CL:0000790!1.78e-09!9;CL:0000144!6.15e-09!121;CL:0000012!6.15e-09!121;CL:0000219!8.58e-09!54;CL:0000738!2.69e-08!17;CL:0002087!2.69e-08!17;CL:0000068!2.83e-08!3;CL:0002202!2.83e-08!3;CL:0000069!2.83e-08!3;CL:0002632!2.83e-08!3;CL:0002368!2.83e-08!3;CL:0000307!2.83e-08!3;CL:0000377!2.83e-08!3|ontology_enrichment_celltype_v019_2=CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1;CL:0000988,8.89e-09,32;CL:0002032,8.89e-09,32;CL:0000037,8.89e-09,32;CL:0000837,8.89e-09,32;CL:0002320,3.65e-08,46;CL:0000134,3.65e-08,46;CL:0000034,1.38e-07,97;CL:0000049,5.88e-07,19;CL:0000219,6.90e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.38e-09!46;UBERON:0003126!2.83e-08!3;UBERON:0001005!2.83e-08!3;UBERON:0007196!2.83e-08!3;UBERON:0001558!2.83e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1;UBERON:0002384,3.65e-08,46|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,5.490760163915,0.70219357896598,1.02730780935303,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.18850937571846,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,1.67741174308288,1.19980546198682,2.03312363316904,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20971958992012,2.23922323717853,2.21119958087078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr9:75256131..75256135,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=433 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:75256131..75256135,+ | |||
|id=chr9:75256131..75256135,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.53e-13!11;CL:0000827!1.53e-13!11;CL:0000838!2.66e-12!12;CL:0000063!2.76e-11!66;CL:0000542!2.97e-11!13;CL:0000051!2.97e-11!13;CL:0000988!3.90e-11!32;CL:0002032!3.90e-11!32;CL:0000037!3.90e-11!32;CL:0000566!3.90e-11!32;CL:0000837!3.90e-11!32;CL:0000624!9.61e-11!8;CL:0000893!1.80e-10!6;CL:0002489!1.80e-10!6;CL:0000898!1.80e-10!6;CL:0000809!1.80e-10!6;CL:0000810!1.80e-10!6;CL:0000895!1.80e-10!6;CL:0000808!1.80e-10!6;CL:0000894!1.80e-10!6;CL:0000806!1.80e-10!6;CL:0000807!1.80e-10!6;CL:0000805!1.80e-10!6;CL:0002425!1.80e-10!6;CL:0002436!1.80e-10!6;CL:0002427!1.80e-10!6;CL:0002428!1.80e-10!6;CL:0002429!1.80e-10!6;CL:0002433!1.80e-10!6;CL:0002431!1.80e-10!6;CL:0002432!1.80e-10!6;CL:0002320!1.38e-09!46;CL:0000134!1.38e-09!46;CL:0000791!1.78e-09!9;CL:0000789!1.78e-09!9;CL:0002420!1.78e-09!9;CL:0002419!1.78e-09!9;CL:0000790!1.78e-09!9;CL:0000144!6.15e-09!121;CL:0000012!6.15e-09!121;CL:0000219!8.58e-09!54;CL:0000738!2.69e-08!17;CL:0002087!2.69e-08!17;CL:0000068!2.83e-08!3;CL:0002202!2.83e-08!3;CL:0000069!2.83e-08!3;CL:0002632!2.83e-08!3;CL:0002368!2.83e-08!3;CL:0000307!2.83e-08!3;CL:0000377!2.83e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1;CL:0000988,8.89e-09,32;CL:0002032,8.89e-09,32;CL:0000037,8.89e-09,32;CL:0000837,8.89e-09,32;CL:0002320,3.65e-08,46;CL:0000134,3.65e-08,46;CL:0000034,1.38e-07,97;CL:0000049,5.88e-07,19;CL:0000219,6.90e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.38e-09!46;UBERON:0003126!2.83e-08!3;UBERON:0001005!2.83e-08!3;UBERON:0007196!2.83e-08!3;UBERON:0001558!2.83e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1;UBERON:0002384,3.65e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,5.490760163915,0.70219357896598,1.02730780935303,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.18850937571846,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,1.67741174308288,1.19980546198682,2.03312363316904,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20971958992012,2.23922323717853,2.21119958087078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:75256131..75256135,+ | |||
}} |
Revision as of 18:45, 14 September 2013
Short description: | p@chr9:75256131..75256135, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:75256131..75256135, + |
Coexpression cluster: | MCL_coexpression_mm9:433 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.19e-09 | 1 |
meso-epithelial cell | 1.19e-09 | 1 |
endothelial cell | 1.19e-09 | 1 |
endothelial cell of sinusoid | 1.19e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.19e-09 | 1 |
hematopoietic cell | 8.89e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.89e-09 | 32 |
hematopoietic stem cell | 8.89e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.89e-09 | 32 |
connective tissue cell | 3.65e-08 | 46 |
mesenchymal cell | 3.65e-08 | 46 |
stem cell | 1.38e-07 | 97 |
common myeloid progenitor | 5.88e-07 | 19 |
motile cell | 6.90e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.19e-09 | 1 |
hepatic sinusoid | 1.19e-09 | 1 |
parenchyma | 1.19e-09 | 1 |
abdomen blood vessel | 1.19e-09 | 1 |
sinusoid | 1.19e-09 | 1 |
digestive system duct | 1.19e-09 | 1 |
abdominal segment blood vessel | 1.19e-09 | 1 |
trunk blood vessel | 1.19e-09 | 1 |
liver parenchyma | 1.19e-09 | 1 |
liver lobule | 1.19e-09 | 1 |
biliary system | 1.19e-09 | 1 |
biliary tree | 1.19e-09 | 1 |
biliary bud | 1.19e-09 | 1 |
hepatic duct | 1.19e-09 | 1 |
connective tissue | 3.65e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.