FFCP PHASE1:Mm9::chr6:117123786..117123805,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=134|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:117123786..117123805,+|id=chr6:117123786..117123805,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.57e-26,3;CL:0000359,1.57e-26,3;CL:0002539,1.57e-26,3;CL:0000514,1.57e-26,3;CL:0000680,1.23e-13,6;CL:0000187,1.23e-13,6;CL:0000056,1.23e-13,6;CL:0000222,8.78e-12,7;CL:0000355,2.66e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.57e-26,3;UBERON:0004237,1.57e-26,3;UBERON:0004695,1.57e-26,3;UBERON:0002111,1.57e-26,3;UBERON:0004178,1.57e-26,3;UBERON:0000947,4.26e-20,4;UBERON:0001637,4.26e-20,4;UBERON:0004573,4.26e-20,4;UBERON:0003509,4.26e-20,4;UBERON:0004571,4.26e-20,4;UBERON:0010191,4.26e-20,4;UBERON:0004572,4.26e-20,4;UBERON:0000055,3.17e-16,5;UBERON:0007500,3.17e-16,5;UBERON:0001981,3.17e-16,5;UBERON:0002049,3.17e-16,5;UBERON:0007798,3.17e-16,5;UBERON:0004537,3.17e-16,5;UBERON:0006965,3.17e-16,5;UBERON:0001134,2.66e-09,9;UBERON:0002036,2.66e-09,9;UBERON:0002385,2.66e-09,9;UBERON:0000486,2.66e-09,9;UBERON:0007503,2.66e-09,9;UBERON:0001015,2.66e-09,9;UBERON:0002329,2.66e-09,9;UBERON:0003082,2.66e-09,9;UBERON:0003059,2.66e-09,9;UBERON:0007282,2.66e-09,9;UBERON:0004290,2.66e-09,9;UBERON:0009618,2.66e-09,9;UBERON:0000383,1.98e-08,10;UBERON:0007524,1.03e-07,11;UBERON:0003077,1.03e-07,11;UBERON:0007285,1.03e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,4.1564541800001,4.9557623083654,5.47673941043627,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0.768436610643109,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,15.8500199997594,23.3807404142582,16.606960001986,0,2.56652954828636,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.373220911830279,0,0,0.260240885925407,0,0,0.30140963567143,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0.549122826376163,11.5014565221884,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0,0,0.476087281772027,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.488660878060728,0.824850614862677,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0.32977250588296,0,0.120625849856312,0.477489376012546,0.164140899745061,0,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.844780627453891,0.469428954583016,0.39061315453185,0.209718688851422,0,0,0.948033361884535,0.202725215290164,0.410843828659309,0.51968329191118,0.537080087002444,0.198681354781265,0.360586348559907,0.147689527174577,0,0.381034033274999,0,0,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0.50695859978048,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr6:117123786..117123805,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=134 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:117123786..117123805,+ | |||
|id=chr6:117123786..117123805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.57e-26,3;CL:0000359,1.57e-26,3;CL:0002539,1.57e-26,3;CL:0000514,1.57e-26,3;CL:0000680,1.23e-13,6;CL:0000187,1.23e-13,6;CL:0000056,1.23e-13,6;CL:0000222,8.78e-12,7;CL:0000355,2.66e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.57e-26,3;UBERON:0004237,1.57e-26,3;UBERON:0004695,1.57e-26,3;UBERON:0002111,1.57e-26,3;UBERON:0004178,1.57e-26,3;UBERON:0000947,4.26e-20,4;UBERON:0001637,4.26e-20,4;UBERON:0004573,4.26e-20,4;UBERON:0003509,4.26e-20,4;UBERON:0004571,4.26e-20,4;UBERON:0010191,4.26e-20,4;UBERON:0004572,4.26e-20,4;UBERON:0000055,3.17e-16,5;UBERON:0007500,3.17e-16,5;UBERON:0001981,3.17e-16,5;UBERON:0002049,3.17e-16,5;UBERON:0007798,3.17e-16,5;UBERON:0004537,3.17e-16,5;UBERON:0006965,3.17e-16,5;UBERON:0001134,2.66e-09,9;UBERON:0002036,2.66e-09,9;UBERON:0002385,2.66e-09,9;UBERON:0000486,2.66e-09,9;UBERON:0007503,2.66e-09,9;UBERON:0001015,2.66e-09,9;UBERON:0002329,2.66e-09,9;UBERON:0003082,2.66e-09,9;UBERON:0003059,2.66e-09,9;UBERON:0007282,2.66e-09,9;UBERON:0004290,2.66e-09,9;UBERON:0009618,2.66e-09,9;UBERON:0000383,1.98e-08,10;UBERON:0007524,1.03e-07,11;UBERON:0003077,1.03e-07,11;UBERON:0007285,1.03e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,4.1564541800001,4.9557623083654,5.47673941043627,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0.768436610643109,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,15.8500199997594,23.3807404142582,16.606960001986,0,2.56652954828636,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.373220911830279,0,0,0.260240885925407,0,0,0.30140963567143,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0.549122826376163,11.5014565221884,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0,0,0.476087281772027,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.488660878060728,0.824850614862677,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0.32977250588296,0,0.120625849856312,0.477489376012546,0.164140899745061,0,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.844780627453891,0.469428954583016,0.39061315453185,0.209718688851422,0,0,0.948033361884535,0.202725215290164,0.410843828659309,0.51968329191118,0.537080087002444,0.198681354781265,0.360586348559907,0.147689527174577,0,0.381034033274999,0,0,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0.50695859978048,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr6:117123786..117123805,+ | |||
}} |
Revision as of 08:38, 14 September 2013
Short description: | p@chr6:117123786..117123805, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117123786..117123805, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.57e-26 | 3 |
vascular associated smooth muscle cell | 1.57e-26 | 3 |
aortic smooth muscle cell | 1.57e-26 | 3 |
smooth muscle myoblast | 1.57e-26 | 3 |
muscle precursor cell | 1.23e-13 | 6 |
muscle cell | 1.23e-13 | 6 |
myoblast | 1.23e-13 | 6 |
mesodermal cell | 8.78e-12 | 7 |
multi-potent skeletal muscle stem cell | 2.66e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.57e-26 | 3 |
blood vessel smooth muscle | 1.57e-26 | 3 |
arterial system smooth muscle | 1.57e-26 | 3 |
artery smooth muscle tissue | 1.57e-26 | 3 |
aorta smooth muscle tissue | 1.57e-26 | 3 |
aorta | 4.26e-20 | 4 |
artery | 4.26e-20 | 4 |
systemic artery | 4.26e-20 | 4 |
arterial blood vessel | 4.26e-20 | 4 |
systemic arterial system | 4.26e-20 | 4 |
aortic system | 4.26e-20 | 4 |
arterial system | 4.26e-20 | 4 |
vessel | 3.17e-16 | 5 |
epithelial tube open at both ends | 3.17e-16 | 5 |
blood vessel | 3.17e-16 | 5 |
vasculature | 3.17e-16 | 5 |
vascular system | 3.17e-16 | 5 |
blood vasculature | 3.17e-16 | 5 |
vascular cord | 3.17e-16 | 5 |
skeletal muscle tissue | 2.66e-09 | 9 |
striated muscle tissue | 2.66e-09 | 9 |
muscle tissue | 2.66e-09 | 9 |
multilaminar epithelium | 2.66e-09 | 9 |
epithelial vesicle | 2.66e-09 | 9 |
musculature | 2.66e-09 | 9 |
somite | 2.66e-09 | 9 |
myotome | 2.66e-09 | 9 |
presomitic mesoderm | 2.66e-09 | 9 |
presumptive segmental plate | 2.66e-09 | 9 |
dermomyotome | 2.66e-09 | 9 |
trunk paraxial mesoderm | 2.66e-09 | 9 |
musculature of body | 1.98e-08 | 10 |
dense mesenchyme tissue | 1.03e-07 | 11 |
paraxial mesoderm | 1.03e-07 | 11 |
presumptive paraxial mesoderm | 1.03e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.