FFCP PHASE1:Mm9::chr8:89996020..89996032,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:89996020..89996032,-|id=chr8:89996020..89996032,-|ontology_enrichment_celltype=CL:0000117!1.39e-17!23;CL:0000337!1.39e-17!23;CL:0000540!2.11e-11!33;CL:0000047!2.11e-11!33;CL:0000031!2.11e-11!33;CL:0000404!2.11e-11!33;CL:0000393!3.19e-09!39;CL:0000211!3.19e-09!39;CL:0002610!5.03e-09!3;CL:0002319!4.11e-08!43;CL:0000221!7.24e-08!44;CL:0000133!7.24e-08!44;CL:0002611!6.30e-07!2|ontology_enrichment_celltype_v019_2=CL:0002610,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!6.59e-18!12;UBERON:0003057!6.59e-18!12;UBERON:0001017!3.94e-12!73;UBERON:0005743!3.94e-12!73;UBERON:0002240!9.62e-12!6;UBERON:0005174!9.62e-12!6;UBERON:0001137!9.62e-12!6;UBERON:0000073!1.11e-11!75;UBERON:0001016!1.11e-11!75;UBERON:0001049!1.13e-11!52;UBERON:0005068!1.13e-11!52;UBERON:0006241!1.13e-11!52;UBERON:0007135!1.13e-11!52;UBERON:0002346!8.17e-10!71;UBERON:0003075!8.17e-10!71;UBERON:0007284!8.17e-10!71;UBERON:0001948!1.38e-09!5;UBERON:0002315!1.38e-09!5;UBERON:0002616!2.08e-09!49;UBERON:0004121!2.64e-09!102;UBERON:0000924!2.64e-09!102;UBERON:0006601!2.64e-09!102;UBERON:0000955!3.73e-09!50;UBERON:0006238!3.73e-09!50;UBERON:0004684!5.03e-09!3;UBERON:0002275!5.03e-09!3;UBERON:0000473!3.95e-08!14;UBERON:0004733!6.82e-08!6;UBERON:0004732!6.82e-08!6;UBERON:0002028!6.82e-08!6;UBERON:0007277!6.82e-08!6;UBERON:0002020!1.10e-07!34;UBERON:0003135!1.58e-07!15;UBERON:0003101!5.34e-07!16;UBERON:0000079!5.34e-07!16;UBERON:0002256!6.30e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0004684,7.15e-11,3;UBERON:0002275,7.15e-11,3;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.153606533256243,0.263772575460388,0.274462930807229,0,0.837548997004143,0,0,0,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,10.4723353406728,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.66183396182839,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr8:89996020..89996032,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:89996020..89996032,- | |||
|id=chr8:89996020..89996032,- | |||
|ontology_enrichment_celltype=CL:0000117!1.39e-17!23;CL:0000337!1.39e-17!23;CL:0000540!2.11e-11!33;CL:0000047!2.11e-11!33;CL:0000031!2.11e-11!33;CL:0000404!2.11e-11!33;CL:0000393!3.19e-09!39;CL:0000211!3.19e-09!39;CL:0002610!5.03e-09!3;CL:0002319!4.11e-08!43;CL:0000221!7.24e-08!44;CL:0000133!7.24e-08!44;CL:0002611!6.30e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!6.59e-18!12;UBERON:0003057!6.59e-18!12;UBERON:0001017!3.94e-12!73;UBERON:0005743!3.94e-12!73;UBERON:0002240!9.62e-12!6;UBERON:0005174!9.62e-12!6;UBERON:0001137!9.62e-12!6;UBERON:0000073!1.11e-11!75;UBERON:0001016!1.11e-11!75;UBERON:0001049!1.13e-11!52;UBERON:0005068!1.13e-11!52;UBERON:0006241!1.13e-11!52;UBERON:0007135!1.13e-11!52;UBERON:0002346!8.17e-10!71;UBERON:0003075!8.17e-10!71;UBERON:0007284!8.17e-10!71;UBERON:0001948!1.38e-09!5;UBERON:0002315!1.38e-09!5;UBERON:0002616!2.08e-09!49;UBERON:0004121!2.64e-09!102;UBERON:0000924!2.64e-09!102;UBERON:0006601!2.64e-09!102;UBERON:0000955!3.73e-09!50;UBERON:0006238!3.73e-09!50;UBERON:0004684!5.03e-09!3;UBERON:0002275!5.03e-09!3;UBERON:0000473!3.95e-08!14;UBERON:0004733!6.82e-08!6;UBERON:0004732!6.82e-08!6;UBERON:0002028!6.82e-08!6;UBERON:0007277!6.82e-08!6;UBERON:0002020!1.10e-07!34;UBERON:0003135!1.58e-07!15;UBERON:0003101!5.34e-07!16;UBERON:0000079!5.34e-07!16;UBERON:0002256!6.30e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0004684,7.15e-11,3;UBERON:0002275,7.15e-11,3;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.153606533256243,0.263772575460388,0.274462930807229,0,0.837548997004143,0,0,0,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,10.4723353406728,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.66183396182839,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr8:89996020..89996032,- | |||
}} |
Revision as of 16:23, 14 September 2013
Short description: | p@chr8:89996020..89996032, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:89996020..89996032, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.63e-30 | 4 |
regional part of metencephalon | 5.63e-30 | 4 |
metencephalon | 5.63e-30 | 4 |
future metencephalon | 5.63e-30 | 4 |
rhombic lip | 5.63e-30 | 4 |
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
raphe nuclei | 7.15e-11 | 3 |
reticular formation | 7.15e-11 | 3 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.