FFCP PHASE1:Mm9::chr3:65196468..65196484,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67437|HGNC=|MCL_coexpression_id=2319|UniProt=Q9DCF9,Q4FK79|association_with_transcript=0bp_to_ENSMUST00000119896,NM_026155,uc008pkn.1,uc008pko.1_5end|description=CAGE_peak_1_at_Ssr3_5end|id=chr3:65196468..65196484,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!9.52e-15!98;UBERON:0000466!6.12e-13!79;UBERON:0005177!2.48e-12!85;UBERON:0000926!7.52e-12!193;UBERON:0004120!7.52e-12!193;UBERON:0006603!7.52e-12!193;UBERON:0003914!5.82e-11!47;UBERON:0005256!6.86e-11!47;UBERON:0003104!3.29e-10!131;UBERON:0009142!3.29e-10!131;UBERON:0009569!7.15e-10!66;UBERON:0005172!1.69e-08!49;UBERON:0005173!1.69e-08!49;UBERON:0002417!1.69e-08!49;UBERON:0000916!1.69e-08!49;UBERON:0002108!2.42e-08!16;UBERON:0002365!7.06e-08!25;UBERON:0002330!7.06e-08!25;UBERON:0001264!7.14e-08!12;UBERON:0003922!7.14e-08!12;UBERON:0002114!7.14e-08!12;UBERON:0003923!7.14e-08!12;UBERON:0003924!7.14e-08!12;UBERON:0003921!7.14e-08!12;UBERON:0000464!1.56e-07!57;UBERON:0005409!1.98e-07!59;UBERON:0001045!3.50e-07!13;UBERON:0004119!3.93e-07!130;UBERON:0000925!3.93e-07!130;UBERON:0006595!3.93e-07!130;UBERON:0001048!9.58e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.53e-18,90;UBERON:0005177,1.08e-15,79;UBERON:0003104,3.61e-12,61;UBERON:0009142,3.61e-12,61;UBERON:0003914,5.82e-11,47;UBERON:0005256,1.01e-10,45;UBERON:0009569,7.15e-10,66;UBERON:0005172,1.69e-08,49;UBERON:0005173,1.69e-08,49;UBERON:0002417,1.69e-08,49;UBERON:0000916,1.69e-08,49;UBERON:0002365,7.06e-08,25;UBERON:0002330,7.06e-08,25;UBERON:0001264,7.14e-08,12|phase1_expression=153.102297832183,144.475818762695,99.1898341869189,46.5794885412518,38.5689712058687,105.428182760667,131.757529295876,20.7888550740938,59.8352069144584,50.0898086329066,20.7173741552861,26.2450403094657,13.1824562047028,11.8891747289836,26.3156711834374,30.1688148410841,18.88817070946,11.3566379528966,17.0021897671116,13.580468857537,74.5829654624882,95.4186041040508,133.473092249996,140.633339635404,130.075062365085,125.182568177074,124.920978886132,153.846460137725,159.049602084985,148.445746428599,250.112016019184,17.7808588568697,21.52726756546,0,66.1470209230419,82.2861494524537,61.6591455912355,52.3164538421135,64.8508335954754,68.0580867165938,31.7645003536748,32.1031377930469,45.6379731849284,268.034325470004,232.862811011225,287.06712038087,39.90195856175,51.6719620621658,57.5577798764316,69.2170440704449,68.0334009099262,38.8131923785423,16.7782606057736,27.5637613964311,23.19047214083,290.960422156656,223.782616592169,221.223327587023,25.2895576074497,28.0365219014177,18.3811107016792,55.9093477914068,65.8078149122243,27.8968912357234,20.7661936139065,23.4458437932213,23.9680088414724,33.8112108682968,30.7958148556179,20.9259204414121,31.9693941254101,26.5655415495537,35.7807036341614,29.8877550084488,21.086003624012,23.8996884518605,26.4278114398533,45.584379696412,46.3891730433855,25.7178261073878,25.2505896342651,27.6084086395083,37.6897048651864,41.0816705323126,52.2570007396691,51.2653738724182,60.792707701217,40.6350791899155,190.98145958629,213.338514181456,78.8431409268564,220.268512507235,316.866641507812,215.341573463489,301.496257695718,204.748287403482,203.64440919104,205.198108383982,149.896524655855,108.121909800164,161.124872224523,125.759947866031,50.9610479413291,35.5533351576666,157.605477856164,145.681922648182,143.568942384198,182.808391430215,90.1103835092158,182.13850463254,145.554189156788,173.240857159608,170.424852472227,184.936679958068,198.254560230798,131.321587939511,179.71074154289,151.250927338228,67.2304019481904,199.78205968505,143.326145480795,177.464342647491,111.835056730873,62.069528966448,67.4418395939325,173.199883431425,127.123847100781,113.381616157754,183.235267439359,71.8995069143149,67.7100892171567,49.7591234366943,61.8814579884504,59.8374170152973,65.8688101253805,72.0351208020844,219.973025916683,226.047465598539,613.358134718529,108.798439493307,147.296341433781,131.04419952708,122.802372527248,128.400504796029,114.165245575928,125.423332158868,93.0458124878107,88.2178494220043,127.40068382331,136.345483800998,153.957233643455,159.793688939702,165.438113289231,213.478578078088,208.251522044839,141.513363707949,170.637804517116,178.856795444727,236.992358495924,187.655949917165,175.660018925841,173.759889309879,175.664593804226,143.047596480363,165.374345015269,152.309733811517,125.015405052223,128.441876603886,144.483548224036,167.614980824756,138.951939561597,130.264188795971,173.883691310512,148.02967989269,65.6104639520077,72.8564655645334,191.312475347619,247.525730397077,145.675875115565,135.858453038357,171.909193403673,194.826284786149,176.790544856672,175.38802727578,200.725793033328,173.263300369659,131.196978993741,160.75682940925,152.071987952914,191.448534043349,185.878722892237,164.291550434853,150.027309653888,149.551303006135,179.205299720198,164.957575554705,147.01598527306,161.312385747733,161.5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| ||
|EntrezGene=67437 | |||
|HGNC= | |||
|MCL_coexpression_id=2319 | |||
|UniProt=Q9DCF9,Q4FK79 | |||
|association_with_transcript=0bp_to_ENSMUST00000119896,NM_026155,uc008pkn.1,uc008pko.1_5end | |||
|description=CAGE_peak_1_at_Ssr3_5end | |||
|id=chr3:65196468..65196484,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!9.52e-15!98;UBERON:0000466!6.12e-13!79;UBERON:0005177!2.48e-12!85;UBERON:0000926!7.52e-12!193;UBERON:0004120!7.52e-12!193;UBERON:0006603!7.52e-12!193;UBERON:0003914!5.82e-11!47;UBERON:0005256!6.86e-11!47;UBERON:0003104!3.29e-10!131;UBERON:0009142!3.29e-10!131;UBERON:0009569!7.15e-10!66;UBERON:0005172!1.69e-08!49;UBERON:0005173!1.69e-08!49;UBERON:0002417!1.69e-08!49;UBERON:0000916!1.69e-08!49;UBERON:0002108!2.42e-08!16;UBERON:0002365!7.06e-08!25;UBERON:0002330!7.06e-08!25;UBERON:0001264!7.14e-08!12;UBERON:0003922!7.14e-08!12;UBERON:0002114!7.14e-08!12;UBERON:0003923!7.14e-08!12;UBERON:0003924!7.14e-08!12;UBERON:0003921!7.14e-08!12;UBERON:0000464!1.56e-07!57;UBERON:0005409!1.98e-07!59;UBERON:0001045!3.50e-07!13;UBERON:0004119!3.93e-07!130;UBERON:0000925!3.93e-07!130;UBERON:0006595!3.93e-07!130;UBERON:0001048!9.58e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.53e-18,90;UBERON:0005177,1.08e-15,79;UBERON:0003104,3.61e-12,61;UBERON:0009142,3.61e-12,61;UBERON:0003914,5.82e-11,47;UBERON:0005256,1.01e-10,45;UBERON:0009569,7.15e-10,66;UBERON:0005172,1.69e-08,49;UBERON:0005173,1.69e-08,49;UBERON:0002417,1.69e-08,49;UBERON:0000916,1.69e-08,49;UBERON:0002365,7.06e-08,25;UBERON:0002330,7.06e-08,25;UBERON:0001264,7.14e-08,12 | |||
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| |||
|short_description=p1@Ssr3 | |||
}} |
Revision as of 02:26, 14 September 2013
Short description: | p1@Ssr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ssr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2319 |
Association with transcript: | 0bp_to_ENSMUST00000119896, NM_026155, uc008pkn.1, uc008pko.1_5end |
EntrezGene: | Ssr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 6.53e-18 | 90 |
trunk region element | 1.08e-15 | 79 |
mesenchyme | 3.61e-12 | 61 |
entire embryonic mesenchyme | 3.61e-12 | 61 |
epithelial tube | 5.82e-11 | 47 |
trunk mesenchyme | 1.01e-10 | 45 |
subdivision of trunk | 7.15e-10 | 66 |
abdomen element | 1.69e-08 | 49 |
abdominal segment element | 1.69e-08 | 49 |
abdominal segment of trunk | 1.69e-08 | 49 |
abdomen | 1.69e-08 | 49 |
exocrine gland | 7.06e-08 | 25 |
exocrine system | 7.06e-08 | 25 |
pancreas | 7.14e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.