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FFCP PHASE1:Mm9::chr14:19103636..19103692,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=69721|HGNC=|MCL_coexpression_id=1|UniProt=Q8CEC5,B8JKK3|association_with_transcript=0bp_to_ENSMUST00000132374,NM_023526,uc007shs.1,uc007sht.1_5end|description=CAGE_peak_2_at_Nkiras1_5end|id=chr14:19103636..19103692,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.73e-13!52;UBERON:0005068!1.73e-13!52;UBERON:0006241!1.73e-13!52;UBERON:0007135!1.73e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002616!4.34e-12!49;UBERON:0000033!9.69e-12!63;UBERON:0002020!6.56e-11!34;UBERON:0003080!5.32e-10!40;UBERON:0007811!8.29e-10!86;UBERON:0001017!1.34e-09!73;UBERON:0005743!1.34e-09!73;UBERON:0002780!1.91e-09!39;UBERON:0001890!1.91e-09!39;UBERON:0006240!1.91e-09!39;UBERON:0002346!2.07e-09!71;UBERON:0003075!2.07e-09!71;UBERON:0007284!2.07e-09!71;UBERON:0000073!4.28e-09!75;UBERON:0001016!4.28e-09!75;UBERON:0003056!6.32e-09!49;UBERON:0002791!1.53e-08!29;UBERON:0003528!1.53e-08!29;UBERON:0001893!1.53e-08!29;UBERON:0000153!2.69e-08!94;UBERON:0002021!6.03e-08!10;UBERON:0000411!6.03e-08!10;UBERON:0001950!6.03e-08!10;UBERON:0002619!4.38e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.67e-14,54;UBERON:0001049,1.85e-13,52;UBERON:0005068,1.85e-13,52;UBERON:0006241,1.85e-13,52;UBERON:0007135,1.85e-13,52;UBERON:0000955,5.69e-11,47;UBERON:0006238,5.69e-11,47;UBERON:0002020,6.50e-11,34;UBERON:0002346,7.51e-11,64;UBERON:0003075,7.51e-11,64;UBERON:0007284,7.51e-11,64;UBERON:0002616,1.71e-10,46;UBERON:0003080,5.27e-10,40;UBERON:0001017,1.36e-09,73;UBERON:0002780,1.89e-09,39;UBERON:0001890,1.89e-09,39;UBERON:0006240,1.89e-09,39;UBERON:0010371,2.73e-09,73;UBERON:0001016,4.34e-09,75;UBERON:0003056,6.27e-09,49;UBERON:0010314,6.58e-09,92;UBERON:0003528,1.52e-08,29;UBERON:0002791,1.52e-08,29;UBERON:0001893,1.52e-08,29;UBERON:0002021,5.99e-08,10;UBERON:0000411,5.99e-08,10;UBERON:0001950,5.99e-08,10;UBERON:0004121,3.10e-07,95;UBERON:0000924,3.10e-07,95;UBERON:0006601,3.10e-07,95;UBERON:0002619,4.35e-07,17|phase1_expression=6.72625157840135,22.6834014965585,24.5699589270349,55.3509506691499,43.5779285053322,2.18243053485457,4.43864017131499,16.7860320474049,3.66050677594334,2.10658073689794,4.28044920563762,1.7549874978974,10.9568467155972,10.9275503023747,0.999329285446988,1.21485160433896,1.39912375625629,5.36285681109004,6.17014951225825,6.36584477697045,8.92954546586233,0.794327609607082,1.30599894569468,7.03966660290989,5.96464130774642,17.8011908875656,9.47676391549965,10.1271479362368,6.84084310042946,5.54466285471848,4.21287970245079,1.27006134691926,0,0,2.3108129580102,1.49611180822643,3.06254034393554,3.34825304589526,5.4693474116666,5.23523743973798,5.88231488031014,7.5135003345429,5.82612423637384,4.53228544712078,4.05507724878058,2.75320128242522,1.56478268869608,0.872100625521786,2.41654801007919,3.11087838518853,3.3596741190087,1.43752564364972,4.86569557567435,7.25362142011344,5.37750078627942,0.771778308107841,5.44413535883638,3.6097046459421,5.26022798234954,5.28990979272033,5.70448263155561,0.677689064138264,0,0.449949858640699,1.97773272513395,0.7104801149461,1.79760066311043,3.45796474789399,4.87341177849845,3.78016627328734,2.73422449756797,30.564655331207,29.3755159465646,6.24703075996266,5.46319184803947,6.43453150627015,50.6533052597188,40.6045735110897,45.4675338438481,4.74790635828698,4.84884511092771,4.68822033501084,55.5574168012748,41.0816705323126,46.1450708285967,22.0971439105251,20.6438937158699,12.3023634244698,3.48340489332647,2.41828992341714,4.92769630792852,6.0229671388697,7.47968467078526,10.7940638327563,10.3964226791627,7.6164570806547,10.9546647702766,0.852151612890289,1.03914401841148,1.7666978725517,8.87313544593087,3.84979432242953,0,0,1.29894624606728,1.26679932737549,1.01104889002957,13.35951392713,3.6251303710604,5.49235914539852,0.693941307064543,4.56698217468212,2.7673859670727,4.06951129492081,4.9387256996996,2.89033160058254,2.71914464507811,5.49477556295664,3.5384422077995,8.7354098971601,5.07935492458905,2.42437626567611,0,24.3008061519584,20.9446706813455,7.66371165625774,1.07833612055328,0.599902730993408,1.77898317902291,55.8719084979989,43.9200578705881,14.1989417887537,55.7976067817207,51.6545223807268,45.2977937139841,44.1296235544301,3.25885964321012,2.86136032403214,3.79084137650512,4.62972082950243,2.08192708740326,2.5289231487682,3.96136685571768,4.82255417074288,4.21826294738233,6.66191345481219,4.8724896771059,11.3829483125167,0.646703978798527,1.70195472151037,2.81521798662318,4.16471891612392,4.72680323683516,3.48252166522167,5.35033554660653,2.38841120182192,1.40442637462647,2.83082697826187,0.568326998791185,2.48550927042602,2.57978665979206,3.6012412292203,2.13070262026689,3.34499193970586,2.93107514486019,2.32533944750408,4.56064782379353,5.13767506415546,6.41783414662574,9.19337798842933,10.8632204791447,10.9649990568999,9.00155472693308,6.71032093801859,43.5300193527743,10.1875566255492,17.181776715157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|EntrezGene=69721
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q8CEC5,B8JKK3
|association_with_transcript=0bp_to_ENSMUST00000132374,NM_023526,uc007shs.1,uc007sht.1_5end
|description=CAGE_peak_2_at_Nkiras1_5end
|id=chr14:19103636..19103692,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.73e-13!52;UBERON:0005068!1.73e-13!52;UBERON:0006241!1.73e-13!52;UBERON:0007135!1.73e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002616!4.34e-12!49;UBERON:0000033!9.69e-12!63;UBERON:0002020!6.56e-11!34;UBERON:0003080!5.32e-10!40;UBERON:0007811!8.29e-10!86;UBERON:0001017!1.34e-09!73;UBERON:0005743!1.34e-09!73;UBERON:0002780!1.91e-09!39;UBERON:0001890!1.91e-09!39;UBERON:0006240!1.91e-09!39;UBERON:0002346!2.07e-09!71;UBERON:0003075!2.07e-09!71;UBERON:0007284!2.07e-09!71;UBERON:0000073!4.28e-09!75;UBERON:0001016!4.28e-09!75;UBERON:0003056!6.32e-09!49;UBERON:0002791!1.53e-08!29;UBERON:0003528!1.53e-08!29;UBERON:0001893!1.53e-08!29;UBERON:0000153!2.69e-08!94;UBERON:0002021!6.03e-08!10;UBERON:0000411!6.03e-08!10;UBERON:0001950!6.03e-08!10;UBERON:0002619!4.38e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.67e-14,54;UBERON:0001049,1.85e-13,52;UBERON:0005068,1.85e-13,52;UBERON:0006241,1.85e-13,52;UBERON:0007135,1.85e-13,52;UBERON:0000955,5.69e-11,47;UBERON:0006238,5.69e-11,47;UBERON:0002020,6.50e-11,34;UBERON:0002346,7.51e-11,64;UBERON:0003075,7.51e-11,64;UBERON:0007284,7.51e-11,64;UBERON:0002616,1.71e-10,46;UBERON:0003080,5.27e-10,40;UBERON:0001017,1.36e-09,73;UBERON:0002780,1.89e-09,39;UBERON:0001890,1.89e-09,39;UBERON:0006240,1.89e-09,39;UBERON:0010371,2.73e-09,73;UBERON:0001016,4.34e-09,75;UBERON:0003056,6.27e-09,49;UBERON:0010314,6.58e-09,92;UBERON:0003528,1.52e-08,29;UBERON:0002791,1.52e-08,29;UBERON:0001893,1.52e-08,29;UBERON:0002021,5.99e-08,10;UBERON:0000411,5.99e-08,10;UBERON:0001950,5.99e-08,10;UBERON:0004121,3.10e-07,95;UBERON:0000924,3.10e-07,95;UBERON:0006601,3.10e-07,95;UBERON:0002619,4.35e-07,17
|phase1_expression=6.72625157840135,22.6834014965585,24.5699589270349,55.3509506691499,43.5779285053322,2.18243053485457,4.43864017131499,16.7860320474049,3.66050677594334,2.10658073689794,4.28044920563762,1.7549874978974,10.9568467155972,10.9275503023747,0.999329285446988,1.21485160433896,1.39912375625629,5.36285681109004,6.17014951225825,6.36584477697045,8.92954546586233,0.794327609607082,1.30599894569468,7.03966660290989,5.96464130774642,17.8011908875656,9.47676391549965,10.1271479362368,6.84084310042946,5.54466285471848,4.21287970245079,1.27006134691926,0,0,2.3108129580102,1.49611180822643,3.06254034393554,3.34825304589526,5.4693474116666,5.23523743973798,5.88231488031014,7.5135003345429,5.82612423637384,4.53228544712078,4.05507724878058,2.75320128242522,1.56478268869608,0.872100625521786,2.41654801007919,3.11087838518853,3.3596741190087,1.43752564364972,4.86569557567435,7.25362142011344,5.37750078627942,0.771778308107841,5.44413535883638,3.6097046459421,5.26022798234954,5.28990979272033,5.70448263155561,0.677689064138264,0,0.449949858640699,1.97773272513395,0.7104801149461,1.79760066311043,3.45796474789399,4.87341177849845,3.78016627328734,2.73422449756797,30.564655331207,29.3755159465646,6.24703075996266,5.46319184803947,6.43453150627015,50.6533052597188,40.6045735110897,45.4675338438481,4.74790635828698,4.84884511092771,4.68822033501084,55.5574168012748,41.0816705323126,46.1450708285967,22.0971439105251,20.6438937158699,12.3023634244698,3.48340489332647,2.41828992341714,4.92769630792852,6.0229671388697,7.47968467078526,10.7940638327563,10.3964226791627,7.6164570806547,10.9546647702766,0.852151612890289,1.03914401841148,1.7666978725517,8.87313544593087,3.84979432242953,0,0,1.29894624606728,1.26679932737549,1.01104889002957,13.35951392713,3.6251303710604,5.49235914539852,0.693941307064543,4.56698217468212,2.7673859670727,4.06951129492081,4.9387256996996,2.89033160058254,2.71914464507811,5.49477556295664,3.5384422077995,8.7354098971601,5.07935492458905,2.42437626567611,0,24.3008061519584,20.9446706813455,7.66371165625774,1.07833612055328,0.599902730993408,1.77898317902291,55.8719084979989,43.9200578705881,14.1989417887537,55.7976067817207,51.6545223807268,45.2977937139841,44.1296235544301,3.25885964321012,2.86136032403214,3.79084137650512,4.62972082950243,2.08192708740326,2.5289231487682,3.96136685571768,4.82255417074288,4.21826294738233,6.66191345481219,4.8724896771059,11.3829483125167,0.646703978798527,1.70195472151037,2.81521798662318,4.16471891612392,4.72680323683516,3.48252166522167,5.35033554660653,2.38841120182192,1.40442637462647,2.83082697826187,0.568326998791185,2.48550927042602,2.57978665979206,3.6012412292203,2.13070262026689,3.34499193970586,2.93107514486019,2.32533944750408,4.56064782379353,5.13767506415546,6.41783414662574,9.19337798842933,10.8632204791447,10.9649990568999,9.00155472693308,6.71032093801859,43.5300193527743,10.1875566255492,17.1817767151575,18.2470890997846,1.06644125267617,1.62565670302307,1.9330119198314,1.4117846723634,1.55664630691409,2.85338439168839,9.49058123089023,6.42325923423642,5.7807098024062,5.37182474511107,6.04388670069272,1.79763881730844,6.05186539649144,8.36393347668342,0.948339504765408,1.02823661348756,5.63538678365402,1.62921062276251,2.90928730751439,2.24434623649019,3.79419222745544,6.19962621514329,5.96595165797224,6.91024117962083,10.6722945751374,1.00107063429656,0.786235980452812,1.34917267430912,2.02860121388503,0.964708639009667,2.5462585178142,1.15078454980324,3.08056930872567,6.86403532970204,5.75072826109418,5.95425516269605,7.48890415474945,5.05157755894223,9.50806291666135,3.37710464954357,2.21703828199926,1.51593129416388,0.977789858652155,1.86719594352707,0.938760993154008,2.01007508930179,2.61848004974615,2.34160377429359,4.41378403497335,2.43611158613652,3.18909537314974,3.93271955317771,3.28101465545202,2.16973587872267,1.50791283939272,3.26343410291226,1.47529281905711,1.65562047782839,66.7890454349214,56.8476679972185,0.655739781506702,5.80683132570058,1.57754109708128,1.56175497718655,3.44677436372478,0.477937595905104,2.67358408898873,2.26461224631066,1.21443210502468,2.33804686329049,3.95287777946523,28.5975971615408,3.40656204499845,3.02711526234334,3.74640006513225,2.96946221350564,1.32745138339963,1.45668381692989,0.604647113929502,1.88605079755898,0.885905678642318,1.84461088766356,5.94385074286909,3.99887102425256,2.13898427030833,2.52829406348653,0,0,12.2558258071364,1.98067203434441,2.06973894052407,5.78709994585299,7.27094957933322,5.52943334566419,7.56925494769756,7.61162372786498,2.81606049676452,6.14313005505079,3.96951116498931,3.46261131177108,4.84393280087717,3.61877549568935,3.34242563208782,2.62625439592098,5.82961673259701,64.8988557036784,2.05045056957423,1.44470807574256,1.29636169158798,2.82552685507037,1.6403307326523,2.0590035588587,2.54967644990783,3.21888340344413,5.38979897837253,4.77335309007557,1.26534397432454,2.43983360552218,2.05210147561422,2.92723614420256,1.74690050996942,2.15782954215713,3.47144514046411,1.30877970992015,3.36998930558661,3.72803587852155,12.4012446510522,2.99033092087958,3.14371131868485,4.083474955225,2.0665571756437,3.71703476079712,3.87278887530988,5.4685841634459,10.2762157537197,11.3544536788223,6.91272015018877,8.84831137758899,1.62180172232131,3.08132871494482,4.02754551231165,3.04345382634718,5.36439657909415,4.32703618271888,4.87375439676105,5.55315474714812,7.84930108546498,7.15865914471568,4.97035191772737,6.5424052315424,8.41513695707296,5.21479882314986,1.10992976687032,0.807424709485281,1.34307693091263,4.82973985080476,1.50145980360946,1.64836461840539,1.71494703263253,1.50471631210609,79.6300098090064,72.731387368134,73.3306257202428,49.1500101502947,60.2872617398165,67.985450765073,65.4771825224852,41.4295506966283,58.4553707589624,53.8470724221893,1.764384908931,3.59122386060928,3.92687293234509,3.64660075602441,5.03071590307158,8.08911437180062,6.88964856185007,7.82933217507798,9.94849549734627,9.8551912587881,9.37873409593887,8.11093267960128,5.15028291084353,5.18603734479441,5.57124048869449,3.81034953026459,7.3007125345259,5.98018583437486,9.47797571847605,7.21274708658547,6.17164654293748,9.76116933876356,5.7224685587357,7.70336008151341,8.28162547654909,7.53070010235921,7.68297486065645,7.89209134313529,5.29636043998861,10.1005608898393,7.59264115994714,7.78185410766951,5.32000356120596,6.50734732981057,5.20847849649082,5.49583271463481,5.6143586026898,5.37177635120746,11.0947232599929,11.2501623750953,7.65163857547391
|short_description=p2@Nkiras1
}}

Revision as of 01:43, 13 September 2013

Short description:p2@Nkiras1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nkiras1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000132374, NM_023526, uc007shs.1, uc007sht.1_5end
EntrezGene:Nkiras1
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p2@Nkiras1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.57
CD326+ enterocyte, pool1.CNhs13542.11848-124I355.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I210.13
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D350.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D745.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E455.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I646.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.36
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I220.94
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A455.87
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F114.20
cortex, adult.CNhs10473.12-14D555.80
cortex, neonate N30.CNhs11107.1392-42F251.65
diencephalon, adult.CNhs10482.20-12F245.30
diencephalon, neonate N30.CNhs11201.1388-42B244.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C64.22
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G110.86
heart, neonate N20.CNhs11127.821-26I610.96
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D26.71
hippocampus, adult.CNhs10478.13-16E843.53
hippocampus, neonate N00.CNhs11228.627-43G110.19
intestinal mucosa, adult.CNhs10506.860-29I317.18
intestine, adult.CNhs10496.178-9A318.25
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I16.20
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H19.51
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C266.79
medulla oblongata, neonate N30.CNhs11200.1396-42A356.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C964.90
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D910.28
testis, neonate N20.CNhs11110.839-18H311.35
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C45.55
thymus, neonate N07.CNhs11211.713-19D37.85
thymus, neonate N10.CNhs11194.748-24E47.16
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A179.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A272.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D749.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A665.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A858.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A953.85
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
regional part of nervous system1.67e-1454
neural tube1.85e-1352
neural rod1.85e-1352
future spinal cord1.85e-1352
neural keel1.85e-1352
brain5.69e-1147
future brain5.69e-1147
gray matter6.50e-1134
neurectoderm7.51e-1164
neural plate7.51e-1164
presumptive neural plate7.51e-1164
regional part of brain1.71e-1046
anterior neural tube5.27e-1040
central nervous system1.36e-0973
regional part of forebrain1.89e-0939
forebrain1.89e-0939
future forebrain1.89e-0939
ecto-epithelium2.73e-0973
nervous system4.34e-0975
pre-chordal neural plate6.27e-0949
structure with developmental contribution from neural crest6.58e-0992
brain grey matter1.52e-0829
regional part of telencephalon1.52e-0829
telencephalon1.52e-0829
occipital lobe5.99e-0810
visual cortex5.99e-0810
neocortex5.99e-0810
ectoderm-derived structure3.10e-0795
ectoderm3.10e-0795
presumptive ectoderm3.10e-0795
regional part of cerebral cortex4.35e-0717







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