FFCP PHASE1:Mm9::chr12:92826788..92826814,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:92826788..92826814,-|id=chr12:92826788..92826814,-|ontology_enrichment_celltype=CL:0000988!1.35e-09!32;CL:0002032!1.35e-09!32;CL:0000037!1.35e-09!32;CL:0000566!1.35e-09!32;CL:0000837!1.35e-09!32;CL:0000838!1.44e-08!12;CL:0000063!1.49e-08!66;CL:0000738!2.64e-08!17;CL:0002087!2.64e-08!17;CL:0000144!4.49e-08!121;CL:0000012!4.49e-08!121;CL:0000084!5.54e-08!11;CL:0000827!5.54e-08!11;CL:0000542!1.00e-07!13;CL:0000051!1.00e-07!13;CL:0002371!5.58e-07!118;CL:0000791!6.76e-07!9;CL:0000789!6.76e-07!9;CL:0002420!6.76e-07!9;CL:0002419!6.76e-07!9;CL:0000790!6.76e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.68e-18,32;CL:0002032,1.68e-18,32;CL:0000037,1.68e-18,32;CL:0000837,1.68e-18,32;CL:0000838,1.79e-17,12;CL:0000084,3.79e-16,11;CL:0000827,3.79e-16,11;CL:0000542,7.35e-16,13;CL:0000051,7.35e-16,13;CL:0000738,2.22e-15,17;CL:0002087,2.22e-15,17;CL:0002320,9.15e-15,46;CL:0000134,9.15e-15,46;CL:0000791,1.09e-13,9;CL:0000789,1.09e-13,9;CL:0002420,1.09e-13,9;CL:0002419,1.09e-13,9;CL:0000790,1.09e-13,9;CL:0000219,1.63e-12,54;CL:0000624,3.13e-12,8;CL:0000034,5.93e-12,97;CL:0002031,7.79e-12,25;CL:0000723,2.12e-10,91;CL:0000048,2.12e-10,91;CL:0002563,4.90e-10,9;CL:0002251,4.90e-10,9;CL:0000075,8.69e-10,7;CL:0000893,3.20e-09,6;CL:0002489,3.20e-09,6;CL:0000898,3.20e-09,6;CL:0000809,3.20e-09,6;CL:0000810,3.20e-09,6;CL:0000895,3.20e-09,6;CL:0000808,3.20e-09,6;CL:0000894,3.20e-09,6;CL:0000806,3.20e-09,6;CL:0000807,3.20e-09,6;CL:0000805,3.20e-09,6;CL:0002425,3.20e-09,6;CL:0002436,3.20e-09,6;CL:0002427,3.20e-09,6;CL:0002428,3.20e-09,6;CL:0002429,3.20e-09,6;CL:0002433,3.20e-09,6;CL:0002431,3.20e-09,6;CL:0002432,3.20e-09,6;CL:0000239,9.16e-09,6;CL:0000677,9.16e-09,6;CL:0000584,9.16e-09,6;CL:0000066,4.58e-07,25;CL:0000223,7.52e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.15e-15,46;UBERON:0003350,4.90e-10,9;UBERON:0004808,4.90e-10,9;UBERON:0001277,4.90e-10,9;UBERON:0000485,7.18e-10,11|phase1_expression=0.960893082628764,2.09385244583617,3.18499467572675,6.35174843744343,4.50806156951712,2.35030980676646,1.63528848416868,8.13476937681931,7.32101355188667,5.85161315804984,1.88339765048055,1.11681022593471,7.19043065711064,6.90621179110079,0.666219523631325,0,0,1.10411757875383,0.274228867211478,1.27316895539409,0.765389611359628,2.48227378002213,3.6567970479451,0.47997726838022,0.22940928106717,0.57423196411502,0.86152399231815,1.50829862880122,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,3.75507105676657,0.498703936075477,6.94175811292055,3.34825304589526,1.5626706890476,3.14114246384279,15.2940186888064,2.04913645487534,1.45653105909346,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0.659058548203415,0,0.419959264876088,0,4.02678254538567,6.5282592781021,6.72187598284928,0,1.43266719969378,0,0.606949382578793,0,1.26766280701236,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.414758449233911,0.405017814995072,0.420649922702764,0.285650984403804,0.441737081903227,1.22490799214954,0.862609239164127,0,0,0.510749352340751,0.614426133024974,0.263772575460388,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0.569486723196412,0.931997229126503,0.681535739998656,1.20914496170857,6.95674772884027,1.72084775396277,1.3599426674155,0,0.649776417447669,0,0.702222100658759,0,0,0,1.83096445709685,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,0,0.485300549842228,0,0,1.86391761218122,0.585561594023094,0.41889341362691,0,7.42853771936706,5.99902730993408,5.46401976414178,0.299581278809645,1.37250180845588,0.879580464790051,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.373220911830279,0.505445516867349,1.89397670297827,1.30120442962704,0.689706313300419,0.180062129805349,1.20563854268572,1.83698547708585,1.5373646434182,1.21812241927647,3.3631438196072,0.646703978798527,0.378212160335639,0.175951124163949,0,0.834141747676794,0.348252166522167,0.205782136407943,0.59710280045548,4.91549231119264,7.20574139921202,5.11494298912067,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.210289948564127,0.514523061896422,0,0.264450566663544,0.213288250535234,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.581857461502877,0.701358198903186,0.252946148497029,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.48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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:92826788..92826814,- | |||
|id=chr12:92826788..92826814,- | |||
|ontology_enrichment_celltype=CL:0000988!1.35e-09!32;CL:0002032!1.35e-09!32;CL:0000037!1.35e-09!32;CL:0000566!1.35e-09!32;CL:0000837!1.35e-09!32;CL:0000838!1.44e-08!12;CL:0000063!1.49e-08!66;CL:0000738!2.64e-08!17;CL:0002087!2.64e-08!17;CL:0000144!4.49e-08!121;CL:0000012!4.49e-08!121;CL:0000084!5.54e-08!11;CL:0000827!5.54e-08!11;CL:0000542!1.00e-07!13;CL:0000051!1.00e-07!13;CL:0002371!5.58e-07!118;CL:0000791!6.76e-07!9;CL:0000789!6.76e-07!9;CL:0002420!6.76e-07!9;CL:0002419!6.76e-07!9;CL:0000790!6.76e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.68e-18,32;CL:0002032,1.68e-18,32;CL:0000037,1.68e-18,32;CL:0000837,1.68e-18,32;CL:0000838,1.79e-17,12;CL:0000084,3.79e-16,11;CL:0000827,3.79e-16,11;CL:0000542,7.35e-16,13;CL:0000051,7.35e-16,13;CL:0000738,2.22e-15,17;CL:0002087,2.22e-15,17;CL:0002320,9.15e-15,46;CL:0000134,9.15e-15,46;CL:0000791,1.09e-13,9;CL:0000789,1.09e-13,9;CL:0002420,1.09e-13,9;CL:0002419,1.09e-13,9;CL:0000790,1.09e-13,9;CL:0000219,1.63e-12,54;CL:0000624,3.13e-12,8;CL:0000034,5.93e-12,97;CL:0002031,7.79e-12,25;CL:0000723,2.12e-10,91;CL:0000048,2.12e-10,91;CL:0002563,4.90e-10,9;CL:0002251,4.90e-10,9;CL:0000075,8.69e-10,7;CL:0000893,3.20e-09,6;CL:0002489,3.20e-09,6;CL:0000898,3.20e-09,6;CL:0000809,3.20e-09,6;CL:0000810,3.20e-09,6;CL:0000895,3.20e-09,6;CL:0000808,3.20e-09,6;CL:0000894,3.20e-09,6;CL:0000806,3.20e-09,6;CL:0000807,3.20e-09,6;CL:0000805,3.20e-09,6;CL:0002425,3.20e-09,6;CL:0002436,3.20e-09,6;CL:0002427,3.20e-09,6;CL:0002428,3.20e-09,6;CL:0002429,3.20e-09,6;CL:0002433,3.20e-09,6;CL:0002431,3.20e-09,6;CL:0002432,3.20e-09,6;CL:0000239,9.16e-09,6;CL:0000677,9.16e-09,6;CL:0000584,9.16e-09,6;CL:0000066,4.58e-07,25;CL:0000223,7.52e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.15e-15,46;UBERON:0003350,4.90e-10,9;UBERON:0004808,4.90e-10,9;UBERON:0001277,4.90e-10,9;UBERON:0000485,7.18e-10,11 | |||
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| |||
|short_description=p@chr12:92826788..92826814,- | |||
}} |
Revision as of 23:37, 12 September 2013
Short description: | p@chr12:92826788..92826814, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:92826788..92826814, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.15e-15 | 46 |
epithelium of mucosa | 4.90e-10 | 9 |
gastrointestinal system epithelium | 4.90e-10 | 9 |
intestinal epithelium | 4.90e-10 | 9 |
simple columnar epithelium | 7.18e-10 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.