FFCP PHASE1:Mm9::chr19:10463876..10463931,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=54525|HGNC=|MCL_coexpression_id=1|UniProt=E9Q9R5|association_with_transcript=-41bp_to_ENSMUST00000025652_5end|description=CAGE_peak_4_at_Syt7_5end|id=chr19:10463876..10463931,+|ontology_enrichment_celltype=CL:0000540!1.63e-11!33;CL:0000047!1.63e-11!33;CL:0000031!1.63e-11!33;CL:0000404!1.63e-11!33;CL:0000117!1.14e-08!23;CL:0000337!1.14e-08!23;CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0000393!2.30e-07!39;CL:0000211!2.30e-07!39;CL:0002319!3.40e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,2.67e-14,33;CL:0000047,2.67e-14,33;CL:0000031,2.67e-14,33;CL:0000404,2.67e-14,33;CL:0000117,3.66e-11,23;CL:0000337,3.66e-11,23;CL:0000393,7.18e-11,39;CL:0000211,7.18e-11,39;CL:0000221,1.58e-09,44;CL:0000133,1.58e-09,44;CL:0002319,3.75e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.38e-25!73;UBERON:0005743!9.38e-25!73;UBERON:0000073!1.83e-24!75;UBERON:0001016!1.83e-24!75;UBERON:0004121!1.46e-22!102;UBERON:0000924!1.46e-22!102;UBERON:0006601!1.46e-22!102;UBERON:0002346!3.67e-22!71;UBERON:0003075!3.67e-22!71;UBERON:0007284!3.67e-22!71;UBERON:0001049!2.38e-20!52;UBERON:0005068!2.38e-20!52;UBERON:0006241!2.38e-20!52;UBERON:0007135!2.38e-20!52;UBERON:0000955!2.59e-19!50;UBERON:0006238!2.59e-19!50;UBERON:0002616!1.36e-18!49;UBERON:0000033!3.17e-17!63;UBERON:0003080!6.35e-15!40;UBERON:0002780!2.56e-14!39;UBERON:0001890!2.56e-14!39;UBERON:0006240!2.56e-14!39;UBERON:0003056!8.44e-14!49;UBERON:0002020!7.87e-13!34;UBERON:0002791!7.58e-10!29;UBERON:0003528!7.58e-10!29;UBERON:0001893!7.58e-10!29;UBERON:0002021!6.54e-08!10;UBERON:0000411!6.54e-08!10;UBERON:0001950!6.54e-08!10;UBERON:0007811!1.50e-07!86;UBERON:0000153!2.16e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-37,73;UBERON:0001016,9.28e-36,75;UBERON:0000073,1.04e-31,54;UBERON:0001049,3.47e-29,52;UBERON:0005068,3.47e-29,52;UBERON:0006241,3.47e-29,52;UBERON:0007135,3.47e-29,52;UBERON:0004121,1.19e-28,95;UBERON:0000924,1.19e-28,95;UBERON:0006601,1.19e-28,95;UBERON:0002346,4.46e-27,64;UBERON:0003075,4.46e-27,64;UBERON:0007284,4.46e-27,64;UBERON:0010371,3.13e-25,73;UBERON:0000955,3.34e-24,47;UBERON:0006238,3.34e-24,47;UBERON:0002616,4.30e-23,46;UBERON:0003080,7.46e-21,40;UBERON:0010314,4.79e-20,92;UBERON:0002780,6.90e-20,39;UBERON:0001890,6.90e-20,39;UBERON:0006240,6.90e-20,39;UBERON:0002020,3.25e-18,34;UBERON:0003056,3.82e-17,49;UBERON:0003528,1.85e-13,29;UBERON:0002791,1.85e-13,29;UBERON:0001893,1.85e-13,29;UBERON:0002021,5.18e-12,10;UBERON:0000411,5.18e-12,10;UBERON:0001950,5.18e-12,10;UBERON:0003076,9.36e-09,12;UBERON:0003057,9.36e-09,12;UBERON:0002619,1.89e-08,17;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8;UBERON:0001894,1.52e-07,10;UBERON:0006222,1.52e-07,10;UBERON:0000956,2.02e-07,21;UBERON:0001869,2.02e-07,21;UBERON:0000203,2.02e-07,21;UBERON:0002240,2.26e-07,6;UBERON:0005174,2.26e-07,6;UBERON:0001137,2.26e-07,6;UBERON:0004111,2.34e-07,122;UBERON:0000025,3.55e-07,114|phase1_expression=1.44133962394315,0.348975407639361,1.36499771816861,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,1.11994695955385,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,3.84401275633236,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.311068836925433,0.945041568321835,0,9.71213346972932,8.1721360152097,0.489963196859816,0.766763768145891,0,7.70811166995721,14.300981865541,9.67721159514334,6.4624280987795,3.93396867490361,5.2091337055676,5.02529398202486,5.06486349028512,3.36156145108982,7.66034322231536,8.25755748634797,4.84638559145781,0.681535739998656,0.151143120213571,6.95674772884027,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,0,1.63286352971307,0.520455980298408,1.52232739156071,0.461230994512117,1.05505848386836,2.11659672844269,0.879666139307728,0,0.144599356919912,0,0.161766849947409,0,0,0,8.49064311333487,8.16842156572475,0,0,0,0,7.48953197024113,7.32000964509802,3.01570445070875,7.82209440865244,7.41574826257959,14.5451631191692,13.6282660976916,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0.540186389416048,0.30140963567143,1.15662048557257,1.7935920839879,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,1.79130840136644,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,0.308534225774757,0,0,0,1.15191894939436,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0.134206418760372,7.99101804543684,2.36680608472354,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,1.11189021922435,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.795825888164603,0,0,0.432276099749388,0,0.758671603812327,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0.947457058852424,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0,0.345369963731791,0,0,0,0,0,4.97706828962155,4.68846746368813,0,0,1.89304931649754,1.95219372148319,1.72338718186239,1.43381278771531,2.22798674082394,3.11384183867716,0.404810701674894,0.876767573733936,1.58115111178609,10.9249247583414,1.98716119291576,0.178065603667255,0.651547837414304,0.329940245945071,0,2.42780636154981,0.302323556964751,0.754420319023592,0,0.922305443831782,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,6.80879211507576,1.08036656418786,0.517434735131018,1.92903331528433,3.54680467284547,3.38900753443934,4.77192159746151,4.26250928760439,0,0,3.30792597082443,0.49465875882444,0.161464426695906,0.120625849856312,0.596861720015682,3.44695889464629,0.291480836629851,4.82105785227325,0,0.82554747185289,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.432021363287205,0,0,0.269728692769641,0.41326727862668,0,0.518459893167171,0,1.69107881605257,1.49516546043979,2.64733584731356,2.72231663681667,1.29159823477731,2.19642963138012,2.22978753426933,1.8228613878153,1.25831213310853,0.724752362478018,1.44015003128933,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0.62799699626633,0,0,0,0.183151624267265,0,0,8.471277639256,5.06357760157895,7.44764167471216,8.42080593484069,12.3314853558716,14.3524840504043,10.8003600037089,11.2580300806055,7.70342095273148,5.69536342927002,0.103787347584177,0,0.682934423016537,0.243106717068294,0.628839487883947,0.735374033800057,0.666740183404846,0.824140228955577,1.92551525755089,0.505394423527595,0.50695859978048,0.377252682772152,0.936415074698824,1.02440243847791,0.861532034334199,0.952587382566147,1.15884325944855,0.964546102318525,2.06042950401653,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,1.16277133305863,0.941093804153306,0.676916863133412,0.548783918618318,0.526139422875686,0.814824683075171,1.68342681497322,0.474540072496697,0.788035859004508,0.409231043169689,0.929621047115796,0.578719832943424,0.749431733813838,0.467863216890817,0.429742108096597,1.3390183244819,0.882365676478062,0.231867835620421|short_description=p4@Syt7}} | ||
|EntrezGene=54525 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9Q9R5 | |||
|association_with_transcript=-41bp_to_ENSMUST00000025652_5end | |||
|description=CAGE_peak_4_at_Syt7_5end | |||
|id=chr19:10463876..10463931,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.63e-11!33;CL:0000047!1.63e-11!33;CL:0000031!1.63e-11!33;CL:0000404!1.63e-11!33;CL:0000117!1.14e-08!23;CL:0000337!1.14e-08!23;CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0000393!2.30e-07!39;CL:0000211!2.30e-07!39;CL:0002319!3.40e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.67e-14,33;CL:0000047,2.67e-14,33;CL:0000031,2.67e-14,33;CL:0000404,2.67e-14,33;CL:0000117,3.66e-11,23;CL:0000337,3.66e-11,23;CL:0000393,7.18e-11,39;CL:0000211,7.18e-11,39;CL:0000221,1.58e-09,44;CL:0000133,1.58e-09,44;CL:0002319,3.75e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.38e-25!73;UBERON:0005743!9.38e-25!73;UBERON:0000073!1.83e-24!75;UBERON:0001016!1.83e-24!75;UBERON:0004121!1.46e-22!102;UBERON:0000924!1.46e-22!102;UBERON:0006601!1.46e-22!102;UBERON:0002346!3.67e-22!71;UBERON:0003075!3.67e-22!71;UBERON:0007284!3.67e-22!71;UBERON:0001049!2.38e-20!52;UBERON:0005068!2.38e-20!52;UBERON:0006241!2.38e-20!52;UBERON:0007135!2.38e-20!52;UBERON:0000955!2.59e-19!50;UBERON:0006238!2.59e-19!50;UBERON:0002616!1.36e-18!49;UBERON:0000033!3.17e-17!63;UBERON:0003080!6.35e-15!40;UBERON:0002780!2.56e-14!39;UBERON:0001890!2.56e-14!39;UBERON:0006240!2.56e-14!39;UBERON:0003056!8.44e-14!49;UBERON:0002020!7.87e-13!34;UBERON:0002791!7.58e-10!29;UBERON:0003528!7.58e-10!29;UBERON:0001893!7.58e-10!29;UBERON:0002021!6.54e-08!10;UBERON:0000411!6.54e-08!10;UBERON:0001950!6.54e-08!10;UBERON:0007811!1.50e-07!86;UBERON:0000153!2.16e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-37,73;UBERON:0001016,9.28e-36,75;UBERON:0000073,1.04e-31,54;UBERON:0001049,3.47e-29,52;UBERON:0005068,3.47e-29,52;UBERON:0006241,3.47e-29,52;UBERON:0007135,3.47e-29,52;UBERON:0004121,1.19e-28,95;UBERON:0000924,1.19e-28,95;UBERON:0006601,1.19e-28,95;UBERON:0002346,4.46e-27,64;UBERON:0003075,4.46e-27,64;UBERON:0007284,4.46e-27,64;UBERON:0010371,3.13e-25,73;UBERON:0000955,3.34e-24,47;UBERON:0006238,3.34e-24,47;UBERON:0002616,4.30e-23,46;UBERON:0003080,7.46e-21,40;UBERON:0010314,4.79e-20,92;UBERON:0002780,6.90e-20,39;UBERON:0001890,6.90e-20,39;UBERON:0006240,6.90e-20,39;UBERON:0002020,3.25e-18,34;UBERON:0003056,3.82e-17,49;UBERON:0003528,1.85e-13,29;UBERON:0002791,1.85e-13,29;UBERON:0001893,1.85e-13,29;UBERON:0002021,5.18e-12,10;UBERON:0000411,5.18e-12,10;UBERON:0001950,5.18e-12,10;UBERON:0003076,9.36e-09,12;UBERON:0003057,9.36e-09,12;UBERON:0002619,1.89e-08,17;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8;UBERON:0001894,1.52e-07,10;UBERON:0006222,1.52e-07,10;UBERON:0000956,2.02e-07,21;UBERON:0001869,2.02e-07,21;UBERON:0000203,2.02e-07,21;UBERON:0002240,2.26e-07,6;UBERON:0005174,2.26e-07,6;UBERON:0001137,2.26e-07,6;UBERON:0004111,2.34e-07,122;UBERON:0000025,3.55e-07,114 | |||
|phase1_expression=1.44133962394315,0.348975407639361,1.36499771816861,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,1.11994695955385,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,3.84401275633236,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.311068836925433,0.945041568321835,0,9.71213346972932,8.1721360152097,0.489963196859816,0.766763768145891,0,7.70811166995721,14.300981865541,9.67721159514334,6.4624280987795,3.93396867490361,5.2091337055676,5.02529398202486,5.06486349028512,3.36156145108982,7.66034322231536,8.25755748634797,4.84638559145781,0.681535739998656,0.151143120213571,6.95674772884027,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,0,1.63286352971307,0.520455980298408,1.52232739156071,0.461230994512117,1.05505848386836,2.11659672844269,0.879666139307728,0,0.144599356919912,0,0.161766849947409,0,0,0,8.49064311333487,8.16842156572475,0,0,0,0,7.48953197024113,7.32000964509802,3.01570445070875,7.82209440865244,7.41574826257959,14.5451631191692,13.6282660976916,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0.540186389416048,0.30140963567143,1.15662048557257,1.7935920839879,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,1.79130840136644,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,0.308534225774757,0,0,0,1.15191894939436,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0.134206418760372,7.99101804543684,2.36680608472354,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,1.11189021922435,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.795825888164603,0,0,0.432276099749388,0,0.758671603812327,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0.947457058852424,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0,0.345369963731791,0,0,0,0,0,4.97706828962155,4.68846746368813,0,0,1.89304931649754,1.95219372148319,1.72338718186239,1.43381278771531,2.22798674082394,3.11384183867716,0.404810701674894,0.876767573733936,1.58115111178609,10.9249247583414,1.98716119291576,0.178065603667255,0.651547837414304,0.329940245945071,0,2.42780636154981,0.302323556964751,0.754420319023592,0,0.922305443831782,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,6.80879211507576,1.08036656418786,0.517434735131018,1.92903331528433,3.54680467284547,3.38900753443934,4.77192159746151,4.26250928760439,0,0,3.30792597082443,0.49465875882444,0.161464426695906,0.120625849856312,0.596861720015682,3.44695889464629,0.291480836629851,4.82105785227325,0,0.82554747185289,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.432021363287205,0,0,0.269728692769641,0.41326727862668,0,0.518459893167171,0,1.69107881605257,1.49516546043979,2.64733584731356,2.72231663681667,1.29159823477731,2.19642963138012,2.22978753426933,1.8228613878153,1.25831213310853,0.724752362478018,1.44015003128933,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0.62799699626633,0,0,0,0.183151624267265,0,0,8.471277639256,5.06357760157895,7.44764167471216,8.42080593484069,12.3314853558716,14.3524840504043,10.8003600037089,11.2580300806055,7.70342095273148,5.69536342927002,0.103787347584177,0,0.682934423016537,0.243106717068294,0.628839487883947,0.735374033800057,0.666740183404846,0.824140228955577,1.92551525755089,0.505394423527595,0.50695859978048,0.377252682772152,0.936415074698824,1.02440243847791,0.861532034334199,0.952587382566147,1.15884325944855,0.964546102318525,2.06042950401653,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,1.16277133305863,0.941093804153306,0.676916863133412,0.548783918618318,0.526139422875686,0.814824683075171,1.68342681497322,0.474540072496697,0.788035859004508,0.409231043169689,0.929621047115796,0.578719832943424,0.749431733813838,0.467863216890817,0.429742108096597,1.3390183244819,0.882365676478062,0.231867835620421 | |||
|short_description=p4@Syt7 | |||
}} |
Revision as of 16:58, 13 September 2013
Short description: | p4@Syt7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Syt7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -41bp_to_ENSMUST00000025652_5end |
EntrezGene: | Syt7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.67e-14 | 33 |
neuronal stem cell | 2.67e-14 | 33 |
neuroblast | 2.67e-14 | 33 |
electrically signaling cell | 2.67e-14 | 33 |
CNS neuron (sensu Vertebrata) | 3.66e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.66e-11 | 23 |
electrically responsive cell | 7.18e-11 | 39 |
electrically active cell | 7.18e-11 | 39 |
ectodermal cell | 1.58e-09 | 44 |
neurectodermal cell | 1.58e-09 | 44 |
neural cell | 3.75e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.