FFCP PHASE1:Mm9::chr3:50241952..50241957,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:50241952..50241957,-|id=chr3:50241952..50241957,-|ontology_enrichment_celltype=CL:0000355!1.30e-11!9|ontology_enrichment_celltype_v019_2=CL:0000355,1.10e-08,9|ontology_enrichment_disease=DOID:0060100!2.80e-33!3;DOID:4045!2.80e-33!3;DOID:0050686!4.67e-17!6|ontology_enrichment_disease_v019_2=DOID:0060100,6.68e-24,3;DOID:4045,6.68e-24,3;DOID:0050686,1.61e-12,6|ontology_enrichment_uberon=UBERON:0001134!1.30e-11!9;UBERON:0002036!1.30e-11!9;UBERON:0002385!1.30e-11!9;UBERON:0000486!1.30e-11!9;UBERON:0001015!1.30e-11!9;UBERON:0004290!1.30e-11!9;UBERON:0003082!1.30e-11!9;UBERON:0000383!1.61e-10!10;UBERON:0002329!1.27e-09!11;UBERON:0003077!1.27e-09!11;UBERON:0003059!1.27e-09!11;UBERON:0007282!1.27e-09!11;UBERON:0009618!1.27e-09!11;UBERON:0007285!1.27e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.10e-08,9;UBERON:0002036,1.10e-08,9;UBERON:0002385,1.10e-08,9;UBERON:0000486,1.10e-08,9;UBERON:0007503,1.10e-08,9;UBERON:0001015,1.10e-08,9;UBERON:0002329,1.10e-08,9;UBERON:0003082,1.10e-08,9;UBERON:0003059,1.10e-08,9;UBERON:0007282,1.10e-08,9;UBERON:0004290,1.10e-08,9;UBERON:0009618,1.10e-08,9;UBERON:0000383,6.49e-08,10;UBERON:0007524,2.79e-07,11;UBERON:0003077,2.79e-07,11;UBERON:0007285,2.79e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,3.906676722619,0.523523743973798,32.3527318417058,10.2456822743767,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:50241952..50241957,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:50241952..50241957,- | |||
|id=chr3:50241952..50241957,- | |||
|ontology_enrichment_celltype=CL:0000355!1.30e-11!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.10e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.80e-33!3;DOID:4045!2.80e-33!3;DOID:0050686!4.67e-17!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.68e-24,3;DOID:4045,6.68e-24,3;DOID:0050686,1.61e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.30e-11!9;UBERON:0002036!1.30e-11!9;UBERON:0002385!1.30e-11!9;UBERON:0000486!1.30e-11!9;UBERON:0001015!1.30e-11!9;UBERON:0004290!1.30e-11!9;UBERON:0003082!1.30e-11!9;UBERON:0000383!1.61e-10!10;UBERON:0002329!1.27e-09!11;UBERON:0003077!1.27e-09!11;UBERON:0003059!1.27e-09!11;UBERON:0007282!1.27e-09!11;UBERON:0009618!1.27e-09!11;UBERON:0007285!1.27e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.10e-08,9;UBERON:0002036,1.10e-08,9;UBERON:0002385,1.10e-08,9;UBERON:0000486,1.10e-08,9;UBERON:0007503,1.10e-08,9;UBERON:0001015,1.10e-08,9;UBERON:0002329,1.10e-08,9;UBERON:0003082,1.10e-08,9;UBERON:0003059,1.10e-08,9;UBERON:0007282,1.10e-08,9;UBERON:0004290,1.10e-08,9;UBERON:0009618,1.10e-08,9;UBERON:0000383,6.49e-08,10;UBERON:0007524,2.79e-07,11;UBERON:0003077,2.79e-07,11;UBERON:0007285,2.79e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,3.906676722619,0.523523743973798,32.3527318417058,10.2456822743767,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:50241952..50241957,- | |||
}} |
Revision as of 02:14, 14 September 2013
Short description: | p@chr3:50241952..50241957, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:50241952..50241957, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.10e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.10e-08 | 9 |
striated muscle tissue | 1.10e-08 | 9 |
muscle tissue | 1.10e-08 | 9 |
multilaminar epithelium | 1.10e-08 | 9 |
epithelial vesicle | 1.10e-08 | 9 |
musculature | 1.10e-08 | 9 |
somite | 1.10e-08 | 9 |
myotome | 1.10e-08 | 9 |
presomitic mesoderm | 1.10e-08 | 9 |
presumptive segmental plate | 1.10e-08 | 9 |
dermomyotome | 1.10e-08 | 9 |
trunk paraxial mesoderm | 1.10e-08 | 9 |
musculature of body | 6.49e-08 | 10 |
dense mesenchyme tissue | 2.79e-07 | 11 |
paraxial mesoderm | 2.79e-07 | 11 |
presumptive paraxial mesoderm | 2.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.68e-24 | 3 |
muscle cancer | 6.68e-24 | 3 |
organ system cancer | 1.61e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.