FFCP PHASE1:Mm9::chr14:48268074..48268102,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=230|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:48268074..48268102,+|id=chr14:48268074..48268102,+|ontology_enrichment_celltype=CL:0000222!3.61e-07!7;CL:0000680!9.64e-07!6;CL:0000183!9.64e-07!6;CL:0000187!9.64e-07!6;CL:0000056!9.64e-07!6|ontology_enrichment_celltype_v019_2=CL:0000192,1.16e-30,3;CL:0000359,1.16e-30,3;CL:0002539,1.16e-30,3;CL:0000514,1.16e-30,3;CL:0000680,1.08e-26,6;CL:0000187,1.08e-26,6;CL:0000056,1.08e-26,6;CL:0000222,5.88e-23,7;CL:0000355,5.74e-18,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.16e-30,3;UBERON:0004237,1.16e-30,3;UBERON:0004695,1.16e-30,3;UBERON:0002111,1.16e-30,3;UBERON:0004178,1.16e-30,3;UBERON:0000947,3.34e-23,4;UBERON:0001637,3.34e-23,4;UBERON:0004573,3.34e-23,4;UBERON:0003509,3.34e-23,4;UBERON:0004571,3.34e-23,4;UBERON:0010191,3.34e-23,4;UBERON:0004572,3.34e-23,4;UBERON:0000055,1.02e-18,5;UBERON:0007500,1.02e-18,5;UBERON:0001981,1.02e-18,5;UBERON:0002049,1.02e-18,5;UBERON:0007798,1.02e-18,5;UBERON:0004537,1.02e-18,5;UBERON:0006965,1.02e-18,5;UBERON:0001134,5.74e-18,9;UBERON:0002036,5.74e-18,9;UBERON:0002385,5.74e-18,9;UBERON:0000486,5.74e-18,9;UBERON:0007503,5.74e-18,9;UBERON:0001015,5.74e-18,9;UBERON:0002329,5.74e-18,9;UBERON:0003082,5.74e-18,9;UBERON:0003059,5.74e-18,9;UBERON:0007282,5.74e-18,9;UBERON:0004290,5.74e-18,9;UBERON:0009618,5.74e-18,9;UBERON:0000383,3.23e-16,10;UBERON:0007524,8.78e-15,11;UBERON:0003077,8.78e-15,11;UBERON:0007285,8.78e-15,11;UBERON:0000029,3.65e-11,1;UBERON:0001097,3.65e-11,1;UBERON:0003968,3.65e-11,1;UBERON:0001467,3.65e-11,1;UBERON:0002204,7.88e-08,32;UBERON:0004872,1.31e-07,33;UBERON:0004535,2.98e-07,23;UBERON:0001009,2.98e-07,23|phase1_expression=0,0,0,0,0.500895729946347,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.685572168028694,0,0.17008658030214,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,7.80560271448579,7.09638518536602,7.89251034295231,0,0,0,0.194429899074283,0.139986421625363,0,0.671130424230945,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0,0,0,0,0,0,1.0214987046815,0.921639199537461,0,0,0,0.279182999001381,0,0.763991238884051,0.294628585473668,0.142371680799103,0,0.605809546665472,1.20914496170857,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,1.29468941823586,0,0,0,0,0.452167921657868,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0,0.521472960576829,0.767146371990992,0.41557608911912,0.486723789203273,0.611036183101898,0,0,0,0,0.459804208866946,0,0,0,0,0,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0.473489471170421,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0,0,0.292399974850665,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0,0.99358059645788,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.17335854031855,0.42366414172764,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0,0.704143431874524,0.2604087696879,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0,0,0,0.93841237725591,0.36630324853453,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr14:48268074..48268102,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:48268074..48268102,+ | |||
|id=chr14:48268074..48268102,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.61e-07!7;CL:0000680!9.64e-07!6;CL:0000183!9.64e-07!6;CL:0000187!9.64e-07!6;CL:0000056!9.64e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.16e-30,3;CL:0000359,1.16e-30,3;CL:0002539,1.16e-30,3;CL:0000514,1.16e-30,3;CL:0000680,1.08e-26,6;CL:0000187,1.08e-26,6;CL:0000056,1.08e-26,6;CL:0000222,5.88e-23,7;CL:0000355,5.74e-18,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.16e-30,3;UBERON:0004237,1.16e-30,3;UBERON:0004695,1.16e-30,3;UBERON:0002111,1.16e-30,3;UBERON:0004178,1.16e-30,3;UBERON:0000947,3.34e-23,4;UBERON:0001637,3.34e-23,4;UBERON:0004573,3.34e-23,4;UBERON:0003509,3.34e-23,4;UBERON:0004571,3.34e-23,4;UBERON:0010191,3.34e-23,4;UBERON:0004572,3.34e-23,4;UBERON:0000055,1.02e-18,5;UBERON:0007500,1.02e-18,5;UBERON:0001981,1.02e-18,5;UBERON:0002049,1.02e-18,5;UBERON:0007798,1.02e-18,5;UBERON:0004537,1.02e-18,5;UBERON:0006965,1.02e-18,5;UBERON:0001134,5.74e-18,9;UBERON:0002036,5.74e-18,9;UBERON:0002385,5.74e-18,9;UBERON:0000486,5.74e-18,9;UBERON:0007503,5.74e-18,9;UBERON:0001015,5.74e-18,9;UBERON:0002329,5.74e-18,9;UBERON:0003082,5.74e-18,9;UBERON:0003059,5.74e-18,9;UBERON:0007282,5.74e-18,9;UBERON:0004290,5.74e-18,9;UBERON:0009618,5.74e-18,9;UBERON:0000383,3.23e-16,10;UBERON:0007524,8.78e-15,11;UBERON:0003077,8.78e-15,11;UBERON:0007285,8.78e-15,11;UBERON:0000029,3.65e-11,1;UBERON:0001097,3.65e-11,1;UBERON:0003968,3.65e-11,1;UBERON:0001467,3.65e-11,1;UBERON:0002204,7.88e-08,32;UBERON:0004872,1.31e-07,33;UBERON:0004535,2.98e-07,23;UBERON:0001009,2.98e-07,23 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.685572168028694,0,0.17008658030214,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,7.80560271448579,7.09638518536602,7.89251034295231,0,0,0,0.194429899074283,0.139986421625363,0,0.671130424230945,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0,0,0,0,0,0,1.0214987046815,0.921639199537461,0,0,0,0.279182999001381,0,0.763991238884051,0.294628585473668,0.142371680799103,0,0.605809546665472,1.20914496170857,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,1.29468941823586,0,0,0,0,0.452167921657868,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0,0.521472960576829,0.767146371990992,0.41557608911912,0.486723789203273,0.611036183101898,0,0,0,0,0.459804208866946,0,0,0,0,0,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0.473489471170421,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0,0,0.292399974850665,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0,0.99358059645788,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.17335854031855,0.42366414172764,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0,0.704143431874524,0.2604087696879,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0,0,0,0.93841237725591,0.36630324853453,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr14:48268074..48268102,+ | |||
}} |
Revision as of 02:12, 13 September 2013
Short description: | p@chr14:48268074..48268102, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:48268074..48268102, + |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.16e-30 | 3 |
vascular associated smooth muscle cell | 1.16e-30 | 3 |
aortic smooth muscle cell | 1.16e-30 | 3 |
smooth muscle myoblast | 1.16e-30 | 3 |
muscle precursor cell | 1.08e-26 | 6 |
muscle cell | 1.08e-26 | 6 |
myoblast | 1.08e-26 | 6 |
mesodermal cell | 5.88e-23 | 7 |
multi-potent skeletal muscle stem cell | 5.74e-18 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.