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FFCP PHASE1:Mm9::chr17:64681157..64681297,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=224938|HGNC=|MCL_coexpression_id=1|UniProt=Q80U04|association_with_transcript=0bp_to_ENSMUST00000172733,ENSMUST00000172818,NM_001025309,NM_144859,uc008dfu.1,uc008dfv.1,uc008dfw.1_5end|description=CAGE_peak_1_at_Pja2_5end|id=chr17:64681157..64681297,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!2.41e-10!122;UBERON:0000033!3.59e-10!63;UBERON:0001049!9.51e-10!52;UBERON:0005068!9.51e-10!52;UBERON:0006241!9.51e-10!52;UBERON:0007135!9.51e-10!52;UBERON:0002346!9.60e-10!71;UBERON:0003075!9.60e-10!71;UBERON:0007284!9.60e-10!71;UBERON:0000955!1.74e-09!50;UBERON:0006238!1.74e-09!50;UBERON:0004121!2.84e-09!102;UBERON:0000924!2.84e-09!102;UBERON:0006601!2.84e-09!102;UBERON:0000025!3.56e-09!114;UBERON:0002616!5.18e-09!49;UBERON:0001017!6.72e-09!73;UBERON:0005743!6.72e-09!73;UBERON:0000073!6.86e-09!75;UBERON:0001016!6.86e-09!75;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0002020!1.33e-07!34;UBERON:0003056!2.86e-07!49;UBERON:0003080!3.30e-07!40;UBERON:0000468!3.51e-07!333;UBERON:0002780!9.25e-07!39;UBERON:0001890!9.25e-07!39;UBERON:0006240!9.25e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.64e-14,92;UBERON:0000073,8.37e-11,54;UBERON:0004111,2.41e-10,122;UBERON:0010371,2.54e-10,73;UBERON:0002346,3.56e-10,64;UBERON:0003075,3.56e-10,64;UBERON:0007284,3.56e-10,64;UBERON:0001049,9.51e-10,52;UBERON:0005068,9.51e-10,52;UBERON:0006241,9.51e-10,52;UBERON:0007135,9.51e-10,52;UBERON:0004121,2.00e-09,95;UBERON:0000924,2.00e-09,95;UBERON:0006601,2.00e-09,95;UBERON:0000025,3.56e-09,114;UBERON:0001017,6.72e-09,73;UBERON:0001016,6.86e-09,75;UBERON:0000955,5.29e-08,47;UBERON:0006238,5.29e-08,47;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0002020,1.33e-07,34;UBERON:0002616,1.48e-07,46;UBERON:0003056,2.86e-07,49;UBERON:0003080,3.30e-07,40;UBERON:0002780,9.25e-07,39;UBERON:0001890,9.25e-07,39;UBERON:0006240,9.25e-07,39|phase1_expression=54.1303103214204,13.6100408979351,9.09998478779072,13.9133537201142,18.0322462780685,14.2697381125106,11.2134067485852,15.1074288426644,6.19470377467334,10.2988391581677,7.53359060192222,6.38177271962691,16.7776715332582,20.6312149708834,10.3264026162855,10.7311891716608,7.69518065940961,13.249410945046,12.4774134581222,7.21462408056651,76.5389611359628,13.2056965097177,13.3211892460857,11.0394771727451,8.48814339948529,10.3361753540704,11.630573896295,14.8675150553263,15.771943814879,15.8778981748756,13.082100128663,5.71527606113668,6.1506478758457,0,9.82095507154334,7.81302833184914,8.16677425049476,30.9713406745312,10.9386948233332,35.0760908462445,21.1763335691165,28.6879103682547,33.0147040061184,68.1101785247873,78.0602370390262,80.9441177033016,7.04152209913235,4.57852828398938,4.39372365468944,9.52706505463989,3.07970127575798,5.75010257459886,10.9058693937529,15.2326049822382,13.4437519656986,27.7840190918823,30.0860111935695,37.6440627362533,30.3474691289397,19.5726662330652,22.1840991227163,5.42151251310611,1.77858959222228,3.5995988691256,2.96659908770092,5.6838409195688,6.89080254192331,10.7581125490035,28.2035745479059,18.3608076131099,22.9254207873006,65.1284244440672,49.695421714113,36.6247489652713,22.2361492762308,21.1420320920305,128.835580769285,207.364237050345,212.437835493385,29.8063010270238,33.4844775584819,51.5704236851192,91.0136576744502,132.811975967476,163.035730377856,128.458063266519,148.208919711866,66.358202713807,35.4398584799301,44.8895067034306,33.6242806893946,18.0689014166091,5.439770669662,20.5087212822371,14.9448576012964,11.6486990645307,35.672882713465,60.5027645152105,41.8255467410619,36.393976174565,54.7880902931287,39.7812079984385,17.8363667794652,7.11066703153331,9.52560580449342,10.387754484479,9.0994400102661,32.1998540807749,34.1798006414267,47.3530423616791,35.3910066602917,31.0554787878384,35.514786577433,38.8864412625766,43.037466811668,34.0556462503421,33.3713206441405,41.2108167221748,20.3460426948471,88.0011663713906,37.5430581382669,30.0622656943838,13.0474232852686,114.770072428526,118.965729470042,20.6920214718959,12.8202183221335,2.99951365496704,12.9611631614526,162.672634393637,194.895256800735,100.523481690292,237.270197062457,229.632480682637,150.854120350241,177.005218006924,59.576027852435,29.6088590052021,49.7863834114339,39.9839526184301,28.8867383377202,24.8294272788151,32.5912454947682,52.5959814246646,48.3739508965941,52.7828527573581,52.5666674780079,52.5167842600202,26.0837271448739,42.3597619575915,38.0054428194129,30.2490110750053,46.7119378699004,55.7203466435466,49.7992770107223,31.4474141573219,5.61770549850588,6.17634977075316,10.7982129770325,47.6389276831654,43.1527950365217,55.0989908070705,49.2429050017237,51.3554644860724,68.1860638962212,65.8071063643654,57.4105078995185,85.3554652704009,76.026650660028,79.9495550065194,85.5275940708778,76.3163934360235,63.4499833191136,65.492732355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|EntrezGene=224938
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q80U04
|association_with_transcript=0bp_to_ENSMUST00000172733,ENSMUST00000172818,NM_001025309,NM_144859,uc008dfu.1,uc008dfv.1,uc008dfw.1_5end
|description=CAGE_peak_1_at_Pja2_5end
|id=chr17:64681157..64681297,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!2.41e-10!122;UBERON:0000033!3.59e-10!63;UBERON:0001049!9.51e-10!52;UBERON:0005068!9.51e-10!52;UBERON:0006241!9.51e-10!52;UBERON:0007135!9.51e-10!52;UBERON:0002346!9.60e-10!71;UBERON:0003075!9.60e-10!71;UBERON:0007284!9.60e-10!71;UBERON:0000955!1.74e-09!50;UBERON:0006238!1.74e-09!50;UBERON:0004121!2.84e-09!102;UBERON:0000924!2.84e-09!102;UBERON:0006601!2.84e-09!102;UBERON:0000025!3.56e-09!114;UBERON:0002616!5.18e-09!49;UBERON:0001017!6.72e-09!73;UBERON:0005743!6.72e-09!73;UBERON:0000073!6.86e-09!75;UBERON:0001016!6.86e-09!75;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0002020!1.33e-07!34;UBERON:0003056!2.86e-07!49;UBERON:0003080!3.30e-07!40;UBERON:0000468!3.51e-07!333;UBERON:0002780!9.25e-07!39;UBERON:0001890!9.25e-07!39;UBERON:0006240!9.25e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.64e-14,92;UBERON:0000073,8.37e-11,54;UBERON:0004111,2.41e-10,122;UBERON:0010371,2.54e-10,73;UBERON:0002346,3.56e-10,64;UBERON:0003075,3.56e-10,64;UBERON:0007284,3.56e-10,64;UBERON:0001049,9.51e-10,52;UBERON:0005068,9.51e-10,52;UBERON:0006241,9.51e-10,52;UBERON:0007135,9.51e-10,52;UBERON:0004121,2.00e-09,95;UBERON:0000924,2.00e-09,95;UBERON:0006601,2.00e-09,95;UBERON:0000025,3.56e-09,114;UBERON:0001017,6.72e-09,73;UBERON:0001016,6.86e-09,75;UBERON:0000955,5.29e-08,47;UBERON:0006238,5.29e-08,47;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0002020,1.33e-07,34;UBERON:0002616,1.48e-07,46;UBERON:0003056,2.86e-07,49;UBERON:0003080,3.30e-07,40;UBERON:0002780,9.25e-07,39;UBERON:0001890,9.25e-07,39;UBERON:0006240,9.25e-07,39
|phase1_expression=54.1303103214204,13.6100408979351,9.09998478779072,13.9133537201142,18.0322462780685,14.2697381125106,11.2134067485852,15.1074288426644,6.19470377467334,10.2988391581677,7.53359060192222,6.38177271962691,16.7776715332582,20.6312149708834,10.3264026162855,10.7311891716608,7.69518065940961,13.249410945046,12.4774134581222,7.21462408056651,76.5389611359628,13.2056965097177,13.3211892460857,11.0394771727451,8.48814339948529,10.3361753540704,11.630573896295,14.8675150553263,15.771943814879,15.8778981748756,13.082100128663,5.71527606113668,6.1506478758457,0,9.82095507154334,7.81302833184914,8.16677425049476,30.9713406745312,10.9386948233332,35.0760908462445,21.1763335691165,28.6879103682547,33.0147040061184,68.1101785247873,78.0602370390262,80.9441177033016,7.04152209913235,4.57852828398938,4.39372365468944,9.52706505463989,3.07970127575798,5.75010257459886,10.9058693937529,15.2326049822382,13.4437519656986,27.7840190918823,30.0860111935695,37.6440627362533,30.3474691289397,19.5726662330652,22.1840991227163,5.42151251310611,1.77858959222228,3.5995988691256,2.96659908770092,5.6838409195688,6.89080254192331,10.7581125490035,28.2035745479059,18.3608076131099,22.9254207873006,65.1284244440672,49.695421714113,36.6247489652713,22.2361492762308,21.1420320920305,128.835580769285,207.364237050345,212.437835493385,29.8063010270238,33.4844775584819,51.5704236851192,91.0136576744502,132.811975967476,163.035730377856,128.458063266519,148.208919711866,66.358202713807,35.4398584799301,44.8895067034306,33.6242806893946,18.0689014166091,5.439770669662,20.5087212822371,14.9448576012964,11.6486990645307,35.672882713465,60.5027645152105,41.8255467410619,36.393976174565,54.7880902931287,39.7812079984385,17.8363667794652,7.11066703153331,9.52560580449342,10.387754484479,9.0994400102661,32.1998540807749,34.1798006414267,47.3530423616791,35.3910066602917,31.0554787878384,35.514786577433,38.8864412625766,43.037466811668,34.0556462503421,33.3713206441405,41.2108167221748,20.3460426948471,88.0011663713906,37.5430581382669,30.0622656943838,13.0474232852686,114.770072428526,118.965729470042,20.6920214718959,12.8202183221335,2.99951365496704,12.9611631614526,162.672634393637,194.895256800735,100.523481690292,237.270197062457,229.632480682637,150.854120350241,177.005218006924,59.576027852435,29.6088590052021,49.7863834114339,39.9839526184301,28.8867383377202,24.8294272788151,32.5912454947682,52.5959814246646,48.3739508965941,52.7828527573581,52.5666674780079,52.5167842600202,26.0837271448739,42.3597619575915,38.0054428194129,30.2490110750053,46.7119378699004,55.7203466435466,49.7992770107223,31.4474141573219,5.61770549850588,6.17634977075316,10.7982129770325,47.6389276831654,43.1527950365217,55.0989908070705,49.2429050017237,51.3554644860724,68.1860638962212,65.8071063643654,57.4105078995185,85.3554652704009,76.026650660028,79.9495550065194,85.5275940708778,76.3163934360235,63.4499833191136,65.4927323550614,226.902854500693,89.3212035452189,18.1730330641089,17.4537373997939,36.0457143404545,37.622340841391,36.0828891701861,26.2188582010345,27.7972554806088,32.1481308130225,28.4717436926707,34.2573825825943,28.1495433856302,33.4246873029133,29.4395771549871,26.9645822596266,27.6656703839609,25.2909417033046,14.7940962743404,33.9318082450895,38.3206301288473,36.0462850286206,31.8082078954906,44.8869247298039,41.6096414277613,38.231028326717,36.2667061313576,31.5896739639809,23.4197575398848,16.8513556773255,19.0662225259807,17.5392447660186,19.4745716532963,17.364755502174,18.8423130318251,16.9740721095978,26.1037715107807,22.2394744682346,43.1304619582064,30.5155577088173,30.5796919652269,23.9949934049756,21.1688947955856,31.3588288886189,46.5578039219844,33.7294712951463,34.8745049585935,30.3843703537587,36.3769884847178,42.5465893902212,36.1826334146741,48.9785456123075,53.9112192843173,59.1310721362229,59.1577191719277,47.6842245822798,54.0503993240253,53.0862044994147,15.0791283939272,13.053736411649,20.6540994667995,38.3552077363578,169.220321847133,176.520800007858,46.7214594323525,67.1572666363632,43.2246260600272,47.6335268041899,52.1324622513373,37.9960388744558,36.761781223595,42.4614796183249,38.8618273607899,57.2821481506171,48.2251089094759,151.984982667515,43.7175462441467,35.7911863371183,52.4496009118515,46.521574678255,29.2039304347918,24.2780636154981,23.5812374432506,30.9312330799673,23.6241514304618,37.1996529012152,39.5395288547378,41.8063788899131,45.2751670548596,35.7121536467472,26.3546521437497,19.5957532171555,86.8120994672159,30.2502637972601,16.9459875755408,38.366329270655,49.6552654198366,44.0570979477114,59.0730983961614,37.4491887410957,36.1394430418114,46.1793914483128,47.1930771837619,38.0887244294819,56.351084916871,50.3612923150101,31.3949264728249,35.6185752446783,29.7310453362448,172.630956171785,18.1123133645724,29.1005483828144,27.593984578087,17.5182665014363,19.8206630195487,18.9885883761414,16.6578861393978,14.4149995893368,17.9659965945751,21.0027535963325,31.6335993581135,40.6638934253697,44.8222164410475,42.4449240909371,42.7990624942508,43.5611838822971,49.5920734352016,45.5455339052212,30.8483636434467,39.1443767244763,49.6049786042087,37.6781696030827,25.6460660208501,35.3901162786167,36.8105496911534,37.339303733462,40.1361756168479,37.4988628350576,34.4987243160589,56.5306842732854,53.573581163963,16.1165671520371,19.8670710984361,19.5150818613172,14.9408946424464,13.2479754793936,16.2918710920637,14.6638448414362,18.6088804239967,19.183625490148,14.860327297725,15.829711066484,15.3008872761411,16.933284128698,18.4665505446879,51.6945274642682,8.21348027484039,8.52281637790019,18.1315385673205,65.1048931888482,52.7387756017821,31.8683826225041,32.7983619990971,47.6493498833595,190.321370961951,199.781152644115,201.086325217228,206.739378359456,204.154590891651,229.639744806469,205.206840070469,219.75674717342,224.758634856165,211.246207194743,31.5513536655897,46.6859101879206,36.1955244198764,40.3557150333368,38.9880482488047,38.423293266053,56.4506688616103,46.1518528215123,51.9889119538741,62.6689085174218,58.0467596748649,60.7376819263165,71.2611871845805,71.8362209982633,80.8691402895035,70.4914663098949,68.3717523074647,74.0771406580627,67.5820877317423,58.2907723732213,55.2019496340519,63.7138144112022,65.8083884254606,51.5979779044766,56.371518868783,65.2378626844826,58.71987929216,58.4014759392011,64.9143664183219,48.8193776342232,60.8597642977013,63.2398776851117,53.2000356120596,68.172210121825,57.8719832943424,49.9621155875892,65.5008503647144,67.684382025214,77.2804861558127,64.192102963779,57.7350910694849
|short_description=p1@Pja2
}}

Revision as of 15:07, 13 September 2013

Short description:p1@Pja2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pja2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000172733, ENSMUST00000172818, NM_001025309, NM_144859, uc008dfu.1, uc008dfv.1, uc008dfw.1_5end
EntrezGene:Pja2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pja2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G754.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.78
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A376.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I214.87
Ileum epithelium, pool1.CNhs13199.10252-104B915.77
Ileum epithelium, pool2.CNhs13232.10253-104C115.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H335.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D868.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D978.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B380.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.09
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C537.64
Mouse Granule cells, donor1.CNhs12131.11713-123C330.35
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.20
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F165.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D549.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3128.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3207.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7212.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F433.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D851.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E491.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5132.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6163.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6128.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6148.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E166.36
Mouse Schwann, donor1.CNhs12507.11728-123D935.44
Mouse Schwann, donor2.CNhs12573.11746-123F944.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C820.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A735.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I760.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E341.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I836.39
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G654.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.20
accessory axillary lymph node, adult.CNhs10475.1063-29H934.18
adrenal gland, adult.CNhs10508.49-24D747.35
adrenal gland, embryo E14.CNhs11038.406-44C535.39
adrenal gland, embryo E16.CNhs11004.1254-43D631.06
adrenal gland, embryo E17.CNhs11043.1263-45I135.51
adrenal gland, embryo E18.CNhs11026.1262-18F538.89
adrenal gland, neonate N00.CNhs11191.1311-23C143.04
adrenal gland, neonate N25.CNhs11223.1377-27I334.06
amnion, adult pregnant day17.5.CNhs10488.583-22A833.37
aorta, adult.CNhs10498.46-23H141.21
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F588.00
bone (os femoris), neonate N16.CNhs11225.1525-43A637.54
bone (os femoris), neonate N20.CNhs11195.1350-25C330.06
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B2114.77
cerebellum, neonate N30.CNhs11135.1395-42I2118.97
colon, adult.CNhs10468.36-18H720.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.96
corpora quadrigemina, adult.CNhs10501.16-22A4162.67
corpus striatum, adult.CNhs10487.19-21D8194.90
corpus striatum, neonate N00.CNhs11226.630-43F1100.52
cortex, adult.CNhs10473.12-14D5237.27
cortex, neonate N30.CNhs11107.1392-42F2229.63
diencephalon, adult.CNhs10482.20-12F2150.85
diencephalon, neonate N30.CNhs11201.1388-42B2177.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B159.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.61
epididymis, adult.CNhs10490.58-23B249.79
eyeball, adult.CNhs10484.31-12G439.98
eyeball, embryo E12.CNhs11016.345-16C628.89
eyeball, embryo E14.CNhs10521.399-16E224.83
eyeball, embryo E15.CNhs10593.426-16C932.59
eyeball, embryo E17.CNhs11023.1261-18D452.60
eyeball, neonate N00.CNhs11207.633-15C648.37
eyeball, neonate N01.CNhs11140.1532-43E752.78
eyeball, neonate N02.CNhs11205.1551-44G852.57
eyeball, neonate N16.CNhs11188.777-19A252.52
forelimb, embryo E11.CNhs10596.335-25E226.08
forelimb, embryo E12.CNhs10600.359-14H242.36
forelimb, embryo E13.CNhs10589.384-1E238.01
forelimb, embryo E14.CNhs10577.413-26A830.25
forelimb, embryo E15.CNhs11007.437-20E746.71
forelimb, embryo E17.CNhs10598.1517-43C455.72
forelimb, embryo E18.CNhs11008.1520-43B549.80
gonad, embryo E13.CNhs11044.1564-45I631.45
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E947.64
heart, embryo E12.CNhs11015.353-12F543.15
heart, embryo E13.CNhs11013.376-3I955.10
heart, embryo E14.CNhs10597.403-26D449.24
heart, embryo E15.CNhs11017.431-16C851.36
heart, embryo E16.CNhs11021.457-17C668.19
heart, embryo E17.CNhs11025.479-18E565.81
heart, embryo E18.CNhs11030.1283-20G357.41
heart, neonate N00.CNhs11213.639-21E385.36
heart, neonate N03.CNhs11221.1349-25I276.03
heart, neonate N10.CNhs11118.749-24G179.95
heart, neonate N16.CNhs11209.782-15G185.53
heart, neonate N20.CNhs11127.821-26I676.32
heart, neonate N25.CNhs11196.1351-25D363.45
heart, neonate N30.CNhs11202.1390-42D265.49
hippocampus, adult.CNhs10478.13-16E8226.90
hippocampus, neonate N00.CNhs11228.627-43G189.32
intestinal mucosa, adult.CNhs10506.860-29I318.17
intestine, adult.CNhs10496.178-9A317.45
intestine, embryo E12.CNhs11019.1251-16I536.05
intestine, embryo E13.CNhs11010.381-16D537.62
intestine, embryo E15.CNhs10602.976-16D836.08
intestine, embryo E16.CNhs10585.463-22H426.22
intestine, embryo E17.CNhs10582.482-18D327.80
intestine, embryo E18.CNhs10526.1289-20F732.15
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E934.26
intestine, neonate N06.CNhs11102.688-20B828.15
intestine, neonate N07.CNhs11095.720-20F233.42
intestine, neonate N10.CNhs11098.755-23A529.44
intestine, neonate N20.CNhs11187.827-18D126.96
intestine, neonate N25.CNhs11121.1352-25E327.67
intestine, neonate N30.CNhs11131.1384-42G125.29
kidney, embryo E14.CNhs10606.411-4I914.79
kidney, embryo E15.CNhs10997.434-16F833.93
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I236.05
kidney, embryo E18.CNhs11001.1288-20C731.81
kidney, neonate N00.CNhs11214.646-21G744.89
kidney, neonate N10.CNhs11206.758-6D541.61
kidney, neonate N20.CNhs11113.832-19I138.23
kidney, neonate N25.CNhs11122.1353-25F336.27
kidney, neonate N30.CNhs11203.1385-42H131.59
liver, adult pregnant day01.CNhs10466.508-5B223.42
liver, embryo E12.CNhs10601.355-15F816.85
liver, embryo E13.CNhs10524.378-3H619.07
liver, embryo E14.CNhs10594.409-16E117.54
liver, embryo E15.CNhs10520.433-16D719.47
liver, embryo E16.CNhs10523.462-17F517.36
liver, embryo E17.CNhs10510.481-18A318.84
liver, embryo E18.CNhs10579.499-43G416.97
liver, neonate N00.CNhs11117.641-24F426.10
liver, neonate N03.CNhs11123.1345-25G222.24
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H230.52
liver, neonate N10.CNhs11115.751-24B930.58
liver, neonate N20.CNhs11220.823-25A323.99
liver, neonate N25.CNhs11198.1368-26H121.17
liver, neonate N30.CNhs11106.1382-42D131.36
lung, adult.CNhs10474.28-22B146.56
lung, embryo E12.CNhs10522.354-16G233.73
lung, embryo E14.CNhs10604.404-26F834.87
lung, embryo E15.CNhs11020.432-17C530.38
lung, embryo E16.CNhs10998.458-17B636.38
lung, embryo E17.CNhs10605.480-44A642.55
lung, embryo E18.CNhs10583.1287-20I636.18
lung, neonate N00.CNhs11224.640-42C648.98
lung, neonate N06.CNhs11212.683-20E553.91
lung, neonate N07.CNhs11111.715-19A359.13
lung, neonate N10.CNhs11219.750-23E659.16
lung, neonate N20.CNhs11109.822-18A447.68
lung, neonate N25.CNhs11119.1359-25C754.05
lung, neonate N30.CNhs11133.1394-42H253.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H238.36
medulla oblongata, adult.CNhs10477.17-12C2169.22
medulla oblongata, neonate N30.CNhs11200.1396-42A3176.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C746.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C267.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.22
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E247.63
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E352.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D738.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.76
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D557.28
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D648.23
olfactory brain, adult.CNhs10489.18-22I9151.98
ovary, adult.CNhs10507.91-2I743.72
ovary, embryo E18.CNhs11040.505-44H735.79
ovary, neonate N00.CNhs11217.1299-22I452.45
oviduct, adult pregnant day01.CNhs10500.988-6G646.52
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F424.28
pancreas, embryo E15.CNhs11042.1556-45F223.58
pancreas, embryo E16.CNhs11003.460-26E530.93
pancreas, embryo E17.CNhs10599.1558-45G323.62
pancreas, embryo E18.CNhs10580.1535-43I737.20
pancreas, neonate N00.CNhs11105.645-26G939.54
pancreas, neonate N01.CNhs11138.1531-43D741.81
pancreas, neonate N02.CNhs11139.1539-43D845.28
pancreas, neonate N16.CNhs11136.787-43B635.71
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G886.81
pituitary gland, embryo E12.CNhs11018.346-16E630.25
pituitary gland, embryo E13.CNhs11009.370-44C716.95
pituitary gland, embryo E14.CNhs11037.398-44A538.37
pituitary gland, embryo E15.CNhs10592.427-16B949.66
pituitary gland, embryo E16.CNhs11036.449-43F644.06
pituitary gland, embryo E17.CNhs11039.1265-44F559.07
pituitary gland, neonate N00.CNhs11190.1308-22E937.45
placenta, adult pregnant day10.CNhs10472.539-13I736.14
placenta, adult pregnant day17.CNhs10464.577-18G346.18
prostate, adult.CNhs10470.859-1F847.19
skin, adult.CNhs10492.30-1C338.09
skin, neonate N00.CNhs11124.650-25G456.35
skin, neonate N03.CNhs11215.662-22H350.36
skin, neonate N06.CNhs11097.693-20I531.39
skin, neonate N10.CNhs11108.762-6C435.62
small intestine, neonate N16.CNhs11114.790-21I129.73
spinal cord, adult.CNhs10505.24-13C9172.63
spleen, adult.CNhs10465.25-2G218.11
spleen, embryo E16.CNhs11035.461-43C129.10
spleen, embryo E18.CNhs11011.1271-21F227.59
spleen, neonate N10.CNhs11116.752-24D117.52
spleen, neonate N20.CNhs11112.824-19H119.82
spleen, neonate N25.CNhs11099.1354-25G318.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.97
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E331.63
stomach, embryo E15.CNhs10603.1252-16G840.66
stomach, embryo E16.CNhs11022.459-17D444.82
stomach, embryo E17.CNhs11006.1035-18D542.44
stomach, embryo E18.CNhs10999.1286-20C642.80
stomach, neonate N03.CNhs11193.1340-24B843.56
stomach, neonate N07.CNhs11210.718-18A949.59
stomach, neonate N25.CNhs11104.1355-25E445.55
stomach, neonate N30.CNhs11134.1386-42I130.85
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G549.60
testis, embryo E13.CNhs11031.389-23F537.68
testis, embryo E15.CNhs11034.443-27C525.65
testis, embryo E16.CNhs11033.470-26G535.39
testis, embryo E17.CNhs11029.486-18I536.81
testis, embryo E18.CNhs11027.503-18G537.34
testis, neonate N00.CNhs11189.1300-22B740.14
testis, neonate N07.CNhs11222.726-26I437.50
testis, neonate N10.CNhs11204.763-44D934.50
testis, neonate N20.CNhs11110.839-18H356.53
testis, neonate N30.CNhs11130.1391-42E253.57
thymus, adult.CNhs10471.38-12B516.12
thymus, embryo E14.CNhs11041.402-44I419.87
thymus, embryo E15.CNhs11005.430-45I219.52
thymus, embryo E16.CNhs11002.456-26C514.94
thymus, embryo E17.CNhs10581.478-18C113.25
thymus, embryo E18.CNhs10595.1273-19G416.29
thymus, neonate N02.CNhs11181.1541-43F814.66
thymus, neonate N03.CNhs11137.2104-43C718.61
thymus, neonate N06.CNhs11197.681-26C419.18
thymus, neonate N07.CNhs11211.713-19D314.86
thymus, neonate N10.CNhs11194.748-24E415.83
thymus, neonate N20.CNhs11186.820-7A215.30
thymus, neonate N25.CNhs11125.1362-25G716.93
thymus, neonate N30.CNhs11132.1393-42G218.47
tongue, adult.CNhs10499.32-1B451.69
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.13
urinary bladder, adult.CNhs10481.879-12E465.10
uterus, adult pregnant day19.CNhs10497.590-15F552.74
uterus, adult.CNhs10509.92-27E531.87
vagina, adult.CNhs10502.89-27D532.80
vesicular gland, adult.CNhs10491.51-27F847.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1190.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2199.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3201.09
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7206.74
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4204.15
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5229.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6205.21
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7219.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8224.76
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9211.25
whole body, embryo E11.CNhs11014.324-5I831.55
whole body, embryo E12.CNhs10587.857-27C946.69
whole body, embryo E13.CNhs10512.372-23H236.20
whole body, embryo E14.5.CNhs10578.420-27D240.36
whole body, embryo E14.CNhs10519.395-14B138.99
whole body, embryo E16.CNhs10514.453-14F238.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G556.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G546.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G551.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G562.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G558.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G560.74
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G571.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G571.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G580.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G570.49
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G568.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G574.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G567.58
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G558.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G555.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G563.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G565.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G551.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G556.37
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G565.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G558.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G558.40
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G564.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G548.82
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G560.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G563.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G553.20
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G568.17
whole body, embryo E17.5.CNhs10513.490-9F957.87
whole body, embryo E17.CNhs10517.475-3I549.96
whole body, embryo E18.CNhs10516.493-3B365.50
whole body, neonate N00.CNhs10525.657-19C267.68
whole body, neonate N01.CNhs10576.659-23C677.28
whole body, neonate N06.CNhs10515.692-21D164.19
whole body, neonate N10.CNhs10518.761-6B457.74





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.64e-1492
regional part of nervous system8.37e-1154
anatomical conduit2.41e-10122
ecto-epithelium2.54e-1073
neurectoderm3.56e-1064
neural plate3.56e-1064
presumptive neural plate3.56e-1064
neural tube9.51e-1052
neural rod9.51e-1052
future spinal cord9.51e-1052
neural keel9.51e-1052
ectoderm-derived structure2.00e-0995
ectoderm2.00e-0995
presumptive ectoderm2.00e-0995
tube3.56e-09114
central nervous system6.72e-0973
nervous system6.86e-0975
brain5.29e-0847
future brain5.29e-0847
occipital lobe6.52e-0810
visual cortex6.52e-0810
neocortex6.52e-0810
gray matter1.33e-0734
regional part of brain1.48e-0746
pre-chordal neural plate2.86e-0749
anterior neural tube3.30e-0740
regional part of forebrain9.25e-0739
forebrain9.25e-0739
future forebrain9.25e-0739







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