FFCP PHASE1:Mm9::chr10:127935732..127935765,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216459|HGNC=|UniProt=Q8CI43|association_with_transcript=0bp_to_ENSMUST00000026428,NM_172259,uc007hne.1_5end|description=CAGE_peak_2_at_Myl6b_5end|id=chr10:127935732..127935765,-|ontology_enrichment_celltype=CL:0002319!1.39e-18!43;CL:0000221!2.11e-18!44;CL:0000133!2.11e-18!44;CL:0000540!1.26e-16!33;CL:0000047!1.26e-16!33;CL:0000031!1.26e-16!33;CL:0000404!1.26e-16!33;CL:0000055!2.28e-16!50;CL:0000393!3.27e-15!39;CL:0000211!3.27e-15!39;CL:0000117!2.57e-13!23;CL:0000337!2.57e-13!23;CL:0002321!7.14e-07!70;CL:0000220!7.14e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.93e-20,43;CL:0000221,3.03e-20,44;CL:0000133,3.03e-20,44;CL:0000540,2.38e-19,33;CL:0000047,2.38e-19,33;CL:0000031,2.38e-19,33;CL:0000404,2.38e-19,33;CL:0000393,4.08e-18,39;CL:0000211,4.08e-18,39;CL:0000117,1.93e-15,23;CL:0000337,1.93e-15,23;CL:0002321,2.60e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.36e-33!73;UBERON:0005743!6.36e-33!73;UBERON:0000073!1.56e-32!75;UBERON:0001016!1.56e-32!75;UBERON:0004121!5.74e-27!102;UBERON:0000924!5.74e-27!102;UBERON:0006601!5.74e-27!102;UBERON:0001049!5.20e-23!52;UBERON:0005068!5.20e-23!52;UBERON:0006241!5.20e-23!52;UBERON:0007135!5.20e-23!52;UBERON:0002346!6.52e-23!71;UBERON:0003075!6.52e-23!71;UBERON:0007284!6.52e-23!71;UBERON:0000955!3.31e-21!50;UBERON:0006238!3.31e-21!50;UBERON:0002616!6.74e-21!49;UBERON:0000033!2.23e-19!63;UBERON:0002020!5.95e-19!34;UBERON:0003080!4.71e-17!40;UBERON:0003056!1.25e-16!49;UBERON:0002780!2.43e-16!39;UBERON:0001890!2.43e-16!39;UBERON:0006240!2.43e-16!39;UBERON:0002791!8.76e-16!29;UBERON:0003528!8.76e-16!29;UBERON:0001893!8.76e-16!29;UBERON:0000956!5.20e-11!21;UBERON:0001869!5.20e-11!21;UBERON:0000203!5.20e-11!21;UBERON:0002619!3.26e-09!17;UBERON:0000153!9.55e-08!94;UBERON:0007811!1.02e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.38e-36,73;UBERON:0001016,4.21e-36,75;UBERON:0004121,1.15e-29,95;UBERON:0000924,1.15e-29,95;UBERON:0006601,1.15e-29,95;UBERON:0000073,4.63e-27,54;UBERON:0002346,1.21e-26,64;UBERON:0003075,1.21e-26,64;UBERON:0007284,1.21e-26,64;UBERON:0001049,1.20e-25,52;UBERON:0005068,1.20e-25,52;UBERON:0006241,1.20e-25,52;UBERON:0007135,1.20e-25,52;UBERON:0010371,8.32e-23,73;UBERON:0002020,4.24e-22,34;UBERON:0000955,2.43e-21,47;UBERON:0006238,2.43e-21,47;UBERON:0002616,5.56e-21,46;UBERON:0003080,3.64e-19,40;UBERON:0003528,2.36e-18,29;UBERON:0002791,2.36e-18,29;UBERON:0001893,2.36e-18,29;UBERON:0002780,2.47e-18,39;UBERON:0001890,2.47e-18,39;UBERON:0006240,2.47e-18,39;UBERON:0003056,2.49e-18,49;UBERON:0010314,5.55e-15,92;UBERON:0000956,1.02e-12,21;UBERON:0001869,1.02e-12,21;UBERON:0000203,1.02e-12,21;UBERON:0002619,1.35e-10,17;UBERON:0003076,5.00e-07,12;UBERON:0003057,5.00e-07,12;UBERON:0002420,6.84e-07,8;UBERON:0007245,6.84e-07,8;UBERON:0010009,6.84e-07,8;UBERON:0010011,6.84e-07,8;UBERON:0000454,6.84e-07,8;UBERON:0002021,9.38e-07,10;UBERON:0000411,9.38e-07,10;UBERON:0001950,9.38e-07,10|phase1_expression=1.12104192973356,0,0,0.60492842261366,0,0,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0.42438965179803,6.03807360072595,1.19149141441062,0.261199789138935,0.319984845586813,0,1.14846392823004,0,0,0,0,0,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,2.64383317748712,3.64956952390252,2.56965453026354,0.782391344348039,4.79655344036982,6.37089929929968,4.08302788055995,0.979904951377538,7.18762821824858,0,0,0,1.28629718017973,0.286533439938757,0,6.27181028664753,5.81890077199236,3.80298842103708,1.35537812827653,0.889294796111139,2.6996991518442,1.97773272513395,2.8419204597844,9.28760342607055,14.2160772968975,5.91030790158323,5.94026128659439,3.78584930432488,11.4260393761521,8.61387309711293,6.1245399607477,5.55903731905771,7.35375029288017,6.60695285996332,10.853423737241,15.3606533256243,5.53922408466814,9.14876436024097,7.8137005583514,17.8677119360884,12.9435400307286,12.6822545654752,9.42811473515737,12.2439645487229,11.3703661953433,0.302904773332736,3.24957708459178,0.289864488701678,0,0,0,0,0,1.40444420131752,2.21559419351475,0.779358013808606,2.47337702157238,1.12674735821344,0,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.91347103775248,0.517875767294343,1.03909497345377,1.56136794089522,1.82679286987285,1.15307748628029,0.452167921657868,0.470354828542819,1.0053327306374,0.247194967734374,2.4581890676385,0,1.13236794963186,1.10420759230197,0,0,4.39171195517321,1.8850203613211,0.510914110417183,1.1981512450592,1.19980546198682,2.03312363316904,23.2175491077475,9.60751265919116,11.6858547464964,10.2556348913443,6.64860189058859,17.454195743003,8.92326946872667,0.203678727700633,0.995255764880744,0,1.89397670297827,2.60240885925407,1.60931473103431,0.720248519221397,1.20563854268572,1.15662048557257,1.5373646434182,1.21812241927647,1.03481348295606,0.862271971731369,1.51284864134255,1.58356011747554,1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| ||
|EntrezGene=216459 | |||
|HGNC= | |||
|UniProt=Q8CI43 | |||
|association_with_transcript=0bp_to_ENSMUST00000026428,NM_172259,uc007hne.1_5end | |||
|description=CAGE_peak_2_at_Myl6b_5end | |||
|id=chr10:127935732..127935765,- | |||
|ontology_enrichment_celltype=CL:0002319!1.39e-18!43;CL:0000221!2.11e-18!44;CL:0000133!2.11e-18!44;CL:0000540!1.26e-16!33;CL:0000047!1.26e-16!33;CL:0000031!1.26e-16!33;CL:0000404!1.26e-16!33;CL:0000055!2.28e-16!50;CL:0000393!3.27e-15!39;CL:0000211!3.27e-15!39;CL:0000117!2.57e-13!23;CL:0000337!2.57e-13!23;CL:0002321!7.14e-07!70;CL:0000220!7.14e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.93e-20,43;CL:0000221,3.03e-20,44;CL:0000133,3.03e-20,44;CL:0000540,2.38e-19,33;CL:0000047,2.38e-19,33;CL:0000031,2.38e-19,33;CL:0000404,2.38e-19,33;CL:0000393,4.08e-18,39;CL:0000211,4.08e-18,39;CL:0000117,1.93e-15,23;CL:0000337,1.93e-15,23;CL:0002321,2.60e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.36e-33!73;UBERON:0005743!6.36e-33!73;UBERON:0000073!1.56e-32!75;UBERON:0001016!1.56e-32!75;UBERON:0004121!5.74e-27!102;UBERON:0000924!5.74e-27!102;UBERON:0006601!5.74e-27!102;UBERON:0001049!5.20e-23!52;UBERON:0005068!5.20e-23!52;UBERON:0006241!5.20e-23!52;UBERON:0007135!5.20e-23!52;UBERON:0002346!6.52e-23!71;UBERON:0003075!6.52e-23!71;UBERON:0007284!6.52e-23!71;UBERON:0000955!3.31e-21!50;UBERON:0006238!3.31e-21!50;UBERON:0002616!6.74e-21!49;UBERON:0000033!2.23e-19!63;UBERON:0002020!5.95e-19!34;UBERON:0003080!4.71e-17!40;UBERON:0003056!1.25e-16!49;UBERON:0002780!2.43e-16!39;UBERON:0001890!2.43e-16!39;UBERON:0006240!2.43e-16!39;UBERON:0002791!8.76e-16!29;UBERON:0003528!8.76e-16!29;UBERON:0001893!8.76e-16!29;UBERON:0000956!5.20e-11!21;UBERON:0001869!5.20e-11!21;UBERON:0000203!5.20e-11!21;UBERON:0002619!3.26e-09!17;UBERON:0000153!9.55e-08!94;UBERON:0007811!1.02e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.38e-36,73;UBERON:0001016,4.21e-36,75;UBERON:0004121,1.15e-29,95;UBERON:0000924,1.15e-29,95;UBERON:0006601,1.15e-29,95;UBERON:0000073,4.63e-27,54;UBERON:0002346,1.21e-26,64;UBERON:0003075,1.21e-26,64;UBERON:0007284,1.21e-26,64;UBERON:0001049,1.20e-25,52;UBERON:0005068,1.20e-25,52;UBERON:0006241,1.20e-25,52;UBERON:0007135,1.20e-25,52;UBERON:0010371,8.32e-23,73;UBERON:0002020,4.24e-22,34;UBERON:0000955,2.43e-21,47;UBERON:0006238,2.43e-21,47;UBERON:0002616,5.56e-21,46;UBERON:0003080,3.64e-19,40;UBERON:0003528,2.36e-18,29;UBERON:0002791,2.36e-18,29;UBERON:0001893,2.36e-18,29;UBERON:0002780,2.47e-18,39;UBERON:0001890,2.47e-18,39;UBERON:0006240,2.47e-18,39;UBERON:0003056,2.49e-18,49;UBERON:0010314,5.55e-15,92;UBERON:0000956,1.02e-12,21;UBERON:0001869,1.02e-12,21;UBERON:0000203,1.02e-12,21;UBERON:0002619,1.35e-10,17;UBERON:0003076,5.00e-07,12;UBERON:0003057,5.00e-07,12;UBERON:0002420,6.84e-07,8;UBERON:0007245,6.84e-07,8;UBERON:0010009,6.84e-07,8;UBERON:0010011,6.84e-07,8;UBERON:0000454,6.84e-07,8;UBERON:0002021,9.38e-07,10;UBERON:0000411,9.38e-07,10;UBERON:0001950,9.38e-07,10 | |||
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| |||
|short_description=p2@Myl6b | |||
}} |
Revision as of 16:09, 12 September 2013
Short description: | p2@Myl6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Myl6b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000026428, NM_172259, uc007hne.1_5end |
EntrezGene: | Myl6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.93e-20 | 43 |
ectodermal cell | 3.03e-20 | 44 |
neurectodermal cell | 3.03e-20 | 44 |
neuron | 2.38e-19 | 33 |
neuronal stem cell | 2.38e-19 | 33 |
neuroblast | 2.38e-19 | 33 |
electrically signaling cell | 2.38e-19 | 33 |
electrically responsive cell | 4.08e-18 | 39 |
electrically active cell | 4.08e-18 | 39 |
CNS neuron (sensu Vertebrata) | 1.93e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-15 | 23 |
embryonic cell | 2.60e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.