FFCP PHASE1:Mm9::chr5:114541307..114541333,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68666|HGNC=|MCL_coexpression_id=1|UniProt=D3Z379|association_with_transcript=42bp_to_ENSMUST00000150106_5end|description=CAGE_peak_2_at_Svop_5end|id=chr5:114541307..114541333,-|ontology_enrichment_celltype=CL:0000540!2.26e-17!33;CL:0000047!2.26e-17!33;CL:0000031!2.26e-17!33;CL:0000404!2.26e-17!33;CL:0000117!3.46e-15!23;CL:0000337!3.46e-15!23;CL:0000393!9.60e-15!39;CL:0000211!9.60e-15!39;CL:0000221!1.29e-14!44;CL:0000133!1.29e-14!44;CL:0002319!2.10e-14!43;CL:0000055!4.20e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-20,23;CL:0000337,1.14e-20,23;CL:0000540,5.53e-17,33;CL:0000047,5.53e-17,33;CL:0000031,5.53e-17,33;CL:0000404,5.53e-17,33;CL:0000393,5.47e-13,39;CL:0000211,5.47e-13,39;CL:0002319,5.56e-11,43;CL:0000221,1.53e-10,44;CL:0000133,1.53e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.16e-36!73;UBERON:0005743!3.16e-36!73;UBERON:0000073!5.85e-36!75;UBERON:0001016!5.85e-36!75;UBERON:0004121!1.02e-34!102;UBERON:0000924!1.02e-34!102;UBERON:0006601!1.02e-34!102;UBERON:0002346!1.53e-34!71;UBERON:0003075!1.53e-34!71;UBERON:0007284!1.53e-34!71;UBERON:0000033!1.69e-30!63;UBERON:0001049!1.97e-28!52;UBERON:0005068!1.97e-28!52;UBERON:0006241!1.97e-28!52;UBERON:0007135!1.97e-28!52;UBERON:0000955!1.19e-27!50;UBERON:0006238!1.19e-27!50;UBERON:0002616!8.10e-27!49;UBERON:0003056!1.56e-26!49;UBERON:0003080!1.69e-22!40;UBERON:0002780!1.02e-21!39;UBERON:0001890!1.02e-21!39;UBERON:0006240!1.02e-21!39;UBERON:0002020!2.83e-21!34;UBERON:0002791!2.67e-18!29;UBERON:0003528!2.67e-18!29;UBERON:0001893!2.67e-18!29;UBERON:0007811!2.61e-16!86;UBERON:0000956!4.15e-13!21;UBERON:0001869!4.15e-13!21;UBERON:0000203!4.15e-13!21;UBERON:0000153!7.30e-13!94;UBERON:0002619!7.77e-11!17;UBERON:0002021!1.39e-09!10;UBERON:0000411!1.39e-09!10;UBERON:0001950!1.39e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.36e-37,64;UBERON:0003075,2.36e-37,64;UBERON:0007284,2.36e-37,64;UBERON:0000073,6.68e-37,54;UBERON:0001017,2.48e-36,73;UBERON:0001016,7.65e-35,75;UBERON:0001049,1.17e-34,52;UBERON:0005068,1.17e-34,52;UBERON:0006241,1.17e-34,52;UBERON:0007135,1.17e-34,52;UBERON:0004121,2.60e-32,95;UBERON:0000924,2.60e-32,95;UBERON:0006601,2.60e-32,95;UBERON:0003056,1.78e-30,49;UBERON:0010371,1.81e-30,73;UBERON:0000955,2.28e-30,47;UBERON:0006238,2.28e-30,47;UBERON:0002616,2.92e-29,46;UBERON:0002020,1.23e-28,34;UBERON:0003080,5.64e-27,40;UBERON:0002780,6.50e-26,39;UBERON:0001890,6.50e-26,39;UBERON:0006240,6.50e-26,39;UBERON:0003528,1.85e-24,29;UBERON:0002791,1.85e-24,29;UBERON:0001893,1.85e-24,29;UBERON:0010314,2.34e-21,92;UBERON:0000956,3.44e-17,21;UBERON:0001869,3.44e-17,21;UBERON:0000203,3.44e-17,21;UBERON:0002619,5.23e-14,17;UBERON:0002021,8.26e-13,10;UBERON:0000411,8.26e-13,10;UBERON:0001950,8.26e-13,10;UBERON:0002420,2.27e-08,8;UBERON:0007245,2.27e-08,8;UBERON:0010009,2.27e-08,8;UBERON:0010011,2.27e-08,8;UBERON:0000454,2.27e-08,8;UBERON:0003076,6.64e-08,12;UBERON:0003057,6.64e-08,12;UBERON:0000025,9.11e-08,114|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,12.5436205732951,14.2827564403449,14.5781222806421,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,3.94020526772215,4.86021377994086,2.73422449756797,6.85562362569129,4.41737081903227,4.77714116938321,4.40889166683887,8.27296907949019,20.9220173898839,10.853423737241,14.4390141260869,10.2871304429551,11.3444678066988,11.4600941522487,14.7966989470732,10.1297269805702,12.6822545654752,8.2496003932627,6.83384067835694,5.03278503728312,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.693941307064543,1.21786191324856,0.230615497256059,0.60289056221049,0.823120949949934,0.502666365318702,0,0,0,0,0,0,1.86391761218122,16.1029438356351,14.4518227701284,0,0,0,0,14.8292733010774,9.60751265919116,5.52879149296603,25.3783507480724,24.5486839037117,15.3763152974074,14.4394724130304,0,0,0,1.89397670297827,0.390361328888111,0.689706313300419,4.32149111532838,2.86339153887859,3.6739709541717,4.74020765053944,4.8724896771059,7.76110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,13.8791366052324,6.38008596751563,0,0,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,14.9312048688647,12.8932855251423,0,0,0.315508219416257,0.780877488593277,1.72338718186239,2.15071918157297,0.891194696329576,1.41538265394416,0.809621403349789,2.33804686329049,0.790575555893047,16.0660658210904,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,3.40439605753788,0.540183282093931,0.388076051348264,1.07168517515796,0.709360934569094,1.07021290561242,1.48094118541909,2.43571959291679,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,11.4963687246516,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5433366030021,22.0956113523445,23.4887160510153,18.0445841460872,26.0331357512844,33.2373314851468,33.7511250115903,26.568950990229,23.5634052671786,20.192652158321,0.726511433089237,3.59122386060928,2.04880326904961,0.972426868273176,1.25767897576789,0.735374033800057,1.11123363900808,1.03017528619447,1.92551525755089,1.76888048234658,0.760437899670719,1.32038438970253,1.31098110457835,1.15245274328765,1.89537047553524,1.42888107384922,1.0429589335037,0.77163688185482,1.23625770240992,1.91358596174717,1.71434626192708,1.06485483695602,1.66905332963125,1.88950341622027,1.41164070622996,1.69229215783353,0.914639864363863,1.8414879800649,1.7654534799962,1.12228454331548,1.06771516311757,1.37906275325789,0.409231043169689,1.39443157067369,0.385813221962283,6.49507502638659,1.40358965067245,1.28922632428979,0.956441660344217,0,0.927471342481686|short_description=p2@Svop}} | ||
|EntrezGene=68666 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3Z379 | |||
|association_with_transcript=42bp_to_ENSMUST00000150106_5end | |||
|description=CAGE_peak_2_at_Svop_5end | |||
|id=chr5:114541307..114541333,- | |||
|ontology_enrichment_celltype=CL:0000540!2.26e-17!33;CL:0000047!2.26e-17!33;CL:0000031!2.26e-17!33;CL:0000404!2.26e-17!33;CL:0000117!3.46e-15!23;CL:0000337!3.46e-15!23;CL:0000393!9.60e-15!39;CL:0000211!9.60e-15!39;CL:0000221!1.29e-14!44;CL:0000133!1.29e-14!44;CL:0002319!2.10e-14!43;CL:0000055!4.20e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-20,23;CL:0000337,1.14e-20,23;CL:0000540,5.53e-17,33;CL:0000047,5.53e-17,33;CL:0000031,5.53e-17,33;CL:0000404,5.53e-17,33;CL:0000393,5.47e-13,39;CL:0000211,5.47e-13,39;CL:0002319,5.56e-11,43;CL:0000221,1.53e-10,44;CL:0000133,1.53e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.16e-36!73;UBERON:0005743!3.16e-36!73;UBERON:0000073!5.85e-36!75;UBERON:0001016!5.85e-36!75;UBERON:0004121!1.02e-34!102;UBERON:0000924!1.02e-34!102;UBERON:0006601!1.02e-34!102;UBERON:0002346!1.53e-34!71;UBERON:0003075!1.53e-34!71;UBERON:0007284!1.53e-34!71;UBERON:0000033!1.69e-30!63;UBERON:0001049!1.97e-28!52;UBERON:0005068!1.97e-28!52;UBERON:0006241!1.97e-28!52;UBERON:0007135!1.97e-28!52;UBERON:0000955!1.19e-27!50;UBERON:0006238!1.19e-27!50;UBERON:0002616!8.10e-27!49;UBERON:0003056!1.56e-26!49;UBERON:0003080!1.69e-22!40;UBERON:0002780!1.02e-21!39;UBERON:0001890!1.02e-21!39;UBERON:0006240!1.02e-21!39;UBERON:0002020!2.83e-21!34;UBERON:0002791!2.67e-18!29;UBERON:0003528!2.67e-18!29;UBERON:0001893!2.67e-18!29;UBERON:0007811!2.61e-16!86;UBERON:0000956!4.15e-13!21;UBERON:0001869!4.15e-13!21;UBERON:0000203!4.15e-13!21;UBERON:0000153!7.30e-13!94;UBERON:0002619!7.77e-11!17;UBERON:0002021!1.39e-09!10;UBERON:0000411!1.39e-09!10;UBERON:0001950!1.39e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.36e-37,64;UBERON:0003075,2.36e-37,64;UBERON:0007284,2.36e-37,64;UBERON:0000073,6.68e-37,54;UBERON:0001017,2.48e-36,73;UBERON:0001016,7.65e-35,75;UBERON:0001049,1.17e-34,52;UBERON:0005068,1.17e-34,52;UBERON:0006241,1.17e-34,52;UBERON:0007135,1.17e-34,52;UBERON:0004121,2.60e-32,95;UBERON:0000924,2.60e-32,95;UBERON:0006601,2.60e-32,95;UBERON:0003056,1.78e-30,49;UBERON:0010371,1.81e-30,73;UBERON:0000955,2.28e-30,47;UBERON:0006238,2.28e-30,47;UBERON:0002616,2.92e-29,46;UBERON:0002020,1.23e-28,34;UBERON:0003080,5.64e-27,40;UBERON:0002780,6.50e-26,39;UBERON:0001890,6.50e-26,39;UBERON:0006240,6.50e-26,39;UBERON:0003528,1.85e-24,29;UBERON:0002791,1.85e-24,29;UBERON:0001893,1.85e-24,29;UBERON:0010314,2.34e-21,92;UBERON:0000956,3.44e-17,21;UBERON:0001869,3.44e-17,21;UBERON:0000203,3.44e-17,21;UBERON:0002619,5.23e-14,17;UBERON:0002021,8.26e-13,10;UBERON:0000411,8.26e-13,10;UBERON:0001950,8.26e-13,10;UBERON:0002420,2.27e-08,8;UBERON:0007245,2.27e-08,8;UBERON:0010009,2.27e-08,8;UBERON:0010011,2.27e-08,8;UBERON:0000454,2.27e-08,8;UBERON:0003076,6.64e-08,12;UBERON:0003057,6.64e-08,12;UBERON:0000025,9.11e-08,114 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,12.5436205732951,14.2827564403449,14.5781222806421,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,3.94020526772215,4.86021377994086,2.73422449756797,6.85562362569129,4.41737081903227,4.77714116938321,4.40889166683887,8.27296907949019,20.9220173898839,10.853423737241,14.4390141260869,10.2871304429551,11.3444678066988,11.4600941522487,14.7966989470732,10.1297269805702,12.6822545654752,8.2496003932627,6.83384067835694,5.03278503728312,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.693941307064543,1.21786191324856,0.230615497256059,0.60289056221049,0.823120949949934,0.502666365318702,0,0,0,0,0,0,1.86391761218122,16.1029438356351,14.4518227701284,0,0,0,0,14.8292733010774,9.60751265919116,5.52879149296603,25.3783507480724,24.5486839037117,15.3763152974074,14.4394724130304,0,0,0,1.89397670297827,0.390361328888111,0.689706313300419,4.32149111532838,2.86339153887859,3.6739709541717,4.74020765053944,4.8724896771059,7.76110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,13.8791366052324,6.38008596751563,0,0,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,14.9312048688647,12.8932855251423,0,0,0.315508219416257,0.780877488593277,1.72338718186239,2.15071918157297,0.891194696329576,1.41538265394416,0.809621403349789,2.33804686329049,0.790575555893047,16.0660658210904,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,3.40439605753788,0.540183282093931,0.388076051348264,1.07168517515796,0.709360934569094,1.07021290561242,1.48094118541909,2.43571959291679,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,11.4963687246516,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5433366030021,22.0956113523445,23.4887160510153,18.0445841460872,26.0331357512844,33.2373314851468,33.7511250115903,26.568950990229,23.5634052671786,20.192652158321,0.726511433089237,3.59122386060928,2.04880326904961,0.972426868273176,1.25767897576789,0.735374033800057,1.11123363900808,1.03017528619447,1.92551525755089,1.76888048234658,0.760437899670719,1.32038438970253,1.31098110457835,1.15245274328765,1.89537047553524,1.42888107384922,1.0429589335037,0.77163688185482,1.23625770240992,1.91358596174717,1.71434626192708,1.06485483695602,1.66905332963125,1.88950341622027,1.41164070622996,1.69229215783353,0.914639864363863,1.8414879800649,1.7654534799962,1.12228454331548,1.06771516311757,1.37906275325789,0.409231043169689,1.39443157067369,0.385813221962283,6.49507502638659,1.40358965067245,1.28922632428979,0.956441660344217,0,0.927471342481686 | |||
|short_description=p2@Svop | |||
}} |
Revision as of 06:02, 14 September 2013
Short description: | p2@Svop |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Svop_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 42bp_to_ENSMUST00000150106_5end |
EntrezGene: | Svop |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.14e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-20 | 23 |
neuron | 5.53e-17 | 33 |
neuronal stem cell | 5.53e-17 | 33 |
neuroblast | 5.53e-17 | 33 |
electrically signaling cell | 5.53e-17 | 33 |
electrically responsive cell | 5.47e-13 | 39 |
electrically active cell | 5.47e-13 | 39 |
neural cell | 5.56e-11 | 43 |
ectodermal cell | 1.53e-10 | 44 |
neurectodermal cell | 1.53e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.