FFCP PHASE1:Mm9::chr12:114214956..114214963,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114214956..114214963,+|id=chr12:114214956..114214963,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,5.76e-09,3;CL:0000117,2.40e-08,23;CL:0000337,2.40e-08,23;CL:0002611,5.41e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.13e-16!52;UBERON:0005068!1.13e-16!52;UBERON:0006241!1.13e-16!52;UBERON:0007135!1.13e-16!52;UBERON:0000955!7.82e-16!50;UBERON:0006238!7.82e-16!50;UBERON:0002616!3.87e-15!49;UBERON:0000033!8.34e-15!63;UBERON:0001017!1.00e-12!73;UBERON:0005743!1.00e-12!73;UBERON:0000073!1.81e-12!75;UBERON:0001016!1.81e-12!75;UBERON:0002346!1.99e-12!71;UBERON:0003075!1.99e-12!71;UBERON:0007284!1.99e-12!71;UBERON:0000153!6.70e-12!94;UBERON:0007811!7.38e-12!86;UBERON:0002020!8.78e-12!34;UBERON:0004121!7.67e-11!102;UBERON:0000924!7.67e-11!102;UBERON:0006601!7.67e-11!102;UBERON:0003080!3.40e-10!40;UBERON:0002780!1.10e-09!39;UBERON:0001890!1.10e-09!39;UBERON:0006240!1.10e-09!39;UBERON:0003056!1.47e-09!49;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0003076!5.40e-08!12;UBERON:0003057!5.40e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.42e-26,54;UBERON:0001049,3.46e-22,52;UBERON:0005068,3.46e-22,52;UBERON:0006241,3.46e-22,52;UBERON:0007135,3.46e-22,52;UBERON:0001017,1.56e-21,73;UBERON:0001016,8.10e-21,75;UBERON:0002020,1.34e-18,34;UBERON:0002021,3.53e-18,10;UBERON:0000411,3.53e-18,10;UBERON:0001950,3.53e-18,10;UBERON:0000955,4.22e-18,47;UBERON:0006238,4.22e-18,47;UBERON:0002346,3.86e-17,64;UBERON:0003075,3.86e-17,64;UBERON:0007284,3.86e-17,64;UBERON:0002616,2.34e-16,46;UBERON:0004121,2.62e-15,95;UBERON:0000924,2.62e-15,95;UBERON:0006601,2.62e-15,95;UBERON:0010371,1.93e-14,73;UBERON:0003528,2.95e-14,29;UBERON:0002791,2.95e-14,29;UBERON:0001893,2.95e-14,29;UBERON:0003080,5.00e-13,40;UBERON:0002619,1.04e-12,17;UBERON:0000956,1.89e-12,21;UBERON:0001869,1.89e-12,21;UBERON:0000203,1.89e-12,21;UBERON:0002780,1.08e-11,39;UBERON:0001890,1.08e-11,39;UBERON:0006240,1.08e-11,39;UBERON:0010314,1.19e-11,92;UBERON:0003076,8.00e-11,12;UBERON:0003057,8.00e-11,12;UBERON:0003056,4.79e-10,49;UBERON:0000025,1.73e-09,114;UBERON:0004684,5.76e-09,3;UBERON:0002275,5.76e-09,3;UBERON:0004111,1.56e-08,122;UBERON:0002240,6.75e-08,6;UBERON:0005174,6.75e-08,6;UBERON:0001137,6.75e-08,6;UBERON:0002256,5.41e-07,2|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.258246646883153,0.563154888606667,0.70219357896598,0.34243593645101,0.0797721589953364,0.684802919724823,0.262261207256992,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.436050312760893,0.439372365468944,0.388859798148567,0.419959264876088,0,0.167782606057736,0.725362142011344,1.68046899571232,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,0,0.768436610643109,0.103689612308478,0.405017814995072,0,1.42825492201902,2.42955395046775,0.367472397644862,0.0958454710182364,0,1.10115880999389,2.042997409363,1.38245879930619,1.18697658957174,0.548925861614458,0,1.11673199600552,0.56276261003168,1.06958773443767,0.883885756421003,1.70846016958924,0.372798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,3.72783522436244,2.04946557908083,1.25668024088073,0,0.11981512450592,0,0,1.04853447583376,0.915001205637253,0.753926112677186,2.08589184230732,1.02286182932132,1.87009240103604,0.486723789203273,0.407357455401265,0.373220911830279,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0.232533944750408,1.07309360559848,0.583826711835847,0.493679549740441,0,0.0810688095458557,0,0,0.268412837520744,1.26173969138476,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0,0.398282546508734,0.189667900953082,0,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0,0.518054945597687,0,0,0,0,0,0.8027529499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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114214956..114214963,+ | |||
|id=chr12:114214956..114214963,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.76e-09,3;CL:0000117,2.40e-08,23;CL:0000337,2.40e-08,23;CL:0002611,5.41e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-16!52;UBERON:0005068!1.13e-16!52;UBERON:0006241!1.13e-16!52;UBERON:0007135!1.13e-16!52;UBERON:0000955!7.82e-16!50;UBERON:0006238!7.82e-16!50;UBERON:0002616!3.87e-15!49;UBERON:0000033!8.34e-15!63;UBERON:0001017!1.00e-12!73;UBERON:0005743!1.00e-12!73;UBERON:0000073!1.81e-12!75;UBERON:0001016!1.81e-12!75;UBERON:0002346!1.99e-12!71;UBERON:0003075!1.99e-12!71;UBERON:0007284!1.99e-12!71;UBERON:0000153!6.70e-12!94;UBERON:0007811!7.38e-12!86;UBERON:0002020!8.78e-12!34;UBERON:0004121!7.67e-11!102;UBERON:0000924!7.67e-11!102;UBERON:0006601!7.67e-11!102;UBERON:0003080!3.40e-10!40;UBERON:0002780!1.10e-09!39;UBERON:0001890!1.10e-09!39;UBERON:0006240!1.10e-09!39;UBERON:0003056!1.47e-09!49;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0003076!5.40e-08!12;UBERON:0003057!5.40e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.42e-26,54;UBERON:0001049,3.46e-22,52;UBERON:0005068,3.46e-22,52;UBERON:0006241,3.46e-22,52;UBERON:0007135,3.46e-22,52;UBERON:0001017,1.56e-21,73;UBERON:0001016,8.10e-21,75;UBERON:0002020,1.34e-18,34;UBERON:0002021,3.53e-18,10;UBERON:0000411,3.53e-18,10;UBERON:0001950,3.53e-18,10;UBERON:0000955,4.22e-18,47;UBERON:0006238,4.22e-18,47;UBERON:0002346,3.86e-17,64;UBERON:0003075,3.86e-17,64;UBERON:0007284,3.86e-17,64;UBERON:0002616,2.34e-16,46;UBERON:0004121,2.62e-15,95;UBERON:0000924,2.62e-15,95;UBERON:0006601,2.62e-15,95;UBERON:0010371,1.93e-14,73;UBERON:0003528,2.95e-14,29;UBERON:0002791,2.95e-14,29;UBERON:0001893,2.95e-14,29;UBERON:0003080,5.00e-13,40;UBERON:0002619,1.04e-12,17;UBERON:0000956,1.89e-12,21;UBERON:0001869,1.89e-12,21;UBERON:0000203,1.89e-12,21;UBERON:0002780,1.08e-11,39;UBERON:0001890,1.08e-11,39;UBERON:0006240,1.08e-11,39;UBERON:0010314,1.19e-11,92;UBERON:0003076,8.00e-11,12;UBERON:0003057,8.00e-11,12;UBERON:0003056,4.79e-10,49;UBERON:0000025,1.73e-09,114;UBERON:0004684,5.76e-09,3;UBERON:0002275,5.76e-09,3;UBERON:0004111,1.56e-08,122;UBERON:0002240,6.75e-08,6;UBERON:0005174,6.75e-08,6;UBERON:0001137,6.75e-08,6;UBERON:0002256,5.41e-07,2 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.258246646883153,0.563154888606667,0.70219357896598,0.34243593645101,0.0797721589953364,0.684802919724823,0.262261207256992,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.436050312760893,0.439372365468944,0.388859798148567,0.419959264876088,0,0.167782606057736,0.725362142011344,1.68046899571232,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,0,0.768436610643109,0.103689612308478,0.405017814995072,0,1.42825492201902,2.42955395046775,0.367472397644862,0.0958454710182364,0,1.10115880999389,2.042997409363,1.38245879930619,1.18697658957174,0.548925861614458,0,1.11673199600552,0.56276261003168,1.06958773443767,0.883885756421003,1.70846016958924,0.372798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,3.72783522436244,2.04946557908083,1.25668024088073,0,0.11981512450592,0,0,1.04853447583376,0.915001205637253,0.753926112677186,2.08589184230732,1.02286182932132,1.87009240103604,0.486723789203273,0.407357455401265,0.373220911830279,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0.232533944750408,1.07309360559848,0.583826711835847,0.493679549740441,0,0.0810688095458557,0,0,0.268412837520744,1.26173969138476,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0,0.398282546508734,0.189667900953082,0,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0,0.518054945597687,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.141940085208269,0.178065603667255,0.162886959353576,0,1.32745138339963,0.971122544619926,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,1.11255181206306,0.170870880797853,0.412773735926445,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0.330916980914195,0,0,0.168956125490778,0,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,0,0,0.167884616364078,0.19318959403219,0,0,0.428736758158132,0,1.12950368523413,1.84130094602871,0,2.92150409984269,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.320125762024346,0.0574354689556133,0,0,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p@chr12:114214956..114214963,+ | |||
}} |
Revision as of 22:24, 12 September 2013
Short description: | p@chr12:114214956..114214963, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114214956..114214963, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.76e-09 | 3 |
CNS neuron (sensu Vertebrata) | 2.40e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.40e-08 | 23 |
neuron of the dorsal spinal cord | 5.41e-07 | 2 |
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