FFCP PHASE1:Mm9::chr10:12912902..12912961,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=353258|HGNC=|MCL_coexpression_id=101|UniProt=Q6NSQ7|association_with_transcript=0bp_to_ENSMUST00000019950,NM_181470,uc007ekp.1_5end|description=CAGE_peak_1_at_Ltv1_5end|id=chr10:12912902..12912961,-|ontology_enrichment_celltype=CL:0000988!3.48e-08!32;CL:0002032!3.48e-08!32;CL:0000037!3.48e-08!32;CL:0000566!3.48e-08!32;CL:0000837!3.48e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,3.48e-08,32;CL:0002032,3.48e-08,32;CL:0000037,3.48e-08,32;CL:0000837,3.48e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.52e-08!193;UBERON:0004120!3.52e-08!193;UBERON:0006603!3.52e-08!193|ontology_enrichment_uberon_v019_2=|phase1_expression=19.8584570409945,17.0997949743287,11.8299802241279,9.98131897312539,12.0214975187123,35.5904056453206,33.4066076051602,31.8934608900693,91.7942468428867,100.881810844779,129.269566010256,111.36193395749,41.0881751834894,42.4863155756327,46.3022568923771,33.4084191193213,28.682037003254,44.3224342328324,42.7797032849905,36.9218997064286,26.8736796877381,28.7943758482567,33.1723732206448,23.5188861506308,24.31738379312,10.9104073181854,16.7997178502039,26.0720191549926,24.5130211098722,22.1786514188739,33.9247681302616,38.1018404075779,43.6695999185045,63.3926724061755,23.9746844393558,24.6027275130569,26.3378469578456,25.5304294749514,31.253413780952,23.5585684788209,28.8233429135197,17.7591826089196,23.7900072985265,44.0638862914521,39.4356262443912,36.5258036801746,7.82391344348039,9.81113203712009,7.46933021297204,11.8602238435313,12.8787507895334,5.75010257459886,48.4891731506858,33.3666585325218,44.3643814868052,28.5557973999901,24.0688089548556,20.1112115988203,9.5088736604011,10.5798195854407,14.5781222806421,7.45457970552091,8.00365316500025,10.3488467487361,4.94433181283487,9.9467216092454,3.29560121570245,6.91592949578798,14.2054768862614,12.2855403881839,14.5124223332454,10.5690864229407,12.3686382932904,16.6587486932338,9.96792898589658,10.1114066527102,17.6185409599022,16.343979274904,15.9750794586493,11.6059933202571,11.2529801630964,16.1483144872596,12.2840519560608,9.56696437053856,16.3494125121187,18.8562294703147,20.6438937158699,18.0807462450542,55.2801211332244,34.1583451682671,26.957397449256,22.371020801516,23.7989966797713,15.1116893658589,29.8897152025928,24.6414787903535,25.5608844639788,33.4043432252993,33.5123945937701,22.6137327686618,21.5490432258321,28.2318250311499,25.4805239706646,7.11066703153331,29.6592726185363,31.9233430498624,33.8701378159905,18.1552368753305,54.6358934495532,29.9853120910946,36.9523746011869,34.7090645275841,30.4412456377997,28.9387469861035,26.4574591055336,26.1386509965725,36.337660256953,27.3292784578633,22.1152637987469,37.2063754879041,33.126227769059,30.0622656943838,27.9587641827183,13.4679166625312,9.84399522023239,27.5893619625279,45.2901170632379,44.9927048245056,42.3143856153305,18.4242486467932,26.0775343606617,20.8586224507355,18.9468509009581,17.6443665557928,19.3242881440391,19.7934340942664,29.8389336081427,24.010545327748,19.9650979162603,17.4666740385773,41.6385417480652,33.3358051428536,33.8516804034057,30.5930780206502,28.3712201461037,31.9003163509276,24.6435535592087,26.1290404446406,36.4309908056503,30.6351849871867,33.7826158394782,43.6199507530874,36.1461423993277,42.8350164822265,33.1309239616789,31.4474141573219,70.2213187313235,66.1384121284818,56.2643728803273,45.5676699578104,45.2635295763516,36.912722599508,40.0098603139005,42.1075455939444,32.2418265934621,32.7872862098075,33.2659017735528,35.4966640796195,31.4309313334748,27.9084688934462,23.3478171492064,23.8305979503292,30.7370161407471,24.0229489581065,20.8187049078486,21.4041593748912,13.5471701023357,33.5852219662701,35.4058495888488,41.1058909192976,47.5520932278524,40.9417554985385,31.1329261382818,29.6751976735592,19.455691523325,43.8099219565869,24.6308504624264,24.2726895890204,30.2194335034636,25.1669434423182,24.2074615859658,24.2952353370328,34.3298900725078,39.4157368503564,40.574784842309,34.0097717501675,28.7049681008086,33.3145144479013,23.1445725874782,24.6508947125936,19.6248409801719,23.4454611451421,22.8268522857105,48.8856159748156,56.6089905926025,47.670767825589,33.6747801504915,32.8000937263287,33.1013607315846,24.4541716833189,40.2095362402088,25.2596500133035,31.629005436018,23.0727387554472,22.1546747911338,28.2888343300765,28.1653939229402,25.0870631108951,27.3434721446575,46.6148872955392,49.3783878619338,41.9270361864715,29.3362810360628,26.6334949332487,27.6130623427776,28.8797798829542,31.369393677132,29.8977331025846,29.8180417389501,23.1047273749191,22.1036776788346,19.6722719670856,22.6186925908908,26.6513785071168,29.5058563811422,30.0771053472158,21.3532284683763,16.7612711826851,34.9181433652319,34.5885170269991,29.0267561862956,32.406415776621,26.2816545234015,21.0292542198246,33.4198011123591,30.5722653251939,27.1223170122179,29.5178416490425,32.4135977916149,18.6366363524648,31.6526390014439,27.2440373610901,24.7588178217436,2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| ||
|EntrezGene=353258 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|UniProt=Q6NSQ7 | |||
|association_with_transcript=0bp_to_ENSMUST00000019950,NM_181470,uc007ekp.1_5end | |||
|description=CAGE_peak_1_at_Ltv1_5end | |||
|id=chr10:12912902..12912961,- | |||
|ontology_enrichment_celltype=CL:0000988!3.48e-08!32;CL:0002032!3.48e-08!32;CL:0000037!3.48e-08!32;CL:0000566!3.48e-08!32;CL:0000837!3.48e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.48e-08,32;CL:0002032,3.48e-08,32;CL:0000037,3.48e-08,32;CL:0000837,3.48e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.52e-08!193;UBERON:0004120!3.52e-08!193;UBERON:0006603!3.52e-08!193 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=19.8584570409945,17.0997949743287,11.8299802241279,9.98131897312539,12.0214975187123,35.5904056453206,33.4066076051602,31.8934608900693,91.7942468428867,100.881810844779,129.269566010256,111.36193395749,41.0881751834894,42.4863155756327,46.3022568923771,33.4084191193213,28.682037003254,44.3224342328324,42.7797032849905,36.9218997064286,26.8736796877381,28.7943758482567,33.1723732206448,23.5188861506308,24.31738379312,10.9104073181854,16.7997178502039,26.0720191549926,24.5130211098722,22.1786514188739,33.9247681302616,38.1018404075779,43.6695999185045,63.3926724061755,23.9746844393558,24.6027275130569,26.3378469578456,25.5304294749514,31.253413780952,23.5585684788209,28.8233429135197,17.7591826089196,23.7900072985265,44.0638862914521,39.4356262443912,36.5258036801746,7.82391344348039,9.81113203712009,7.46933021297204,11.8602238435313,12.8787507895334,5.75010257459886,48.4891731506858,33.3666585325218,44.3643814868052,28.5557973999901,24.0688089548556,20.1112115988203,9.5088736604011,10.5798195854407,14.5781222806421,7.45457970552091,8.00365316500025,10.3488467487361,4.94433181283487,9.9467216092454,3.29560121570245,6.91592949578798,14.2054768862614,12.2855403881839,14.5124223332454,10.5690864229407,12.3686382932904,16.6587486932338,9.96792898589658,10.1114066527102,17.6185409599022,16.343979274904,15.9750794586493,11.6059933202571,11.2529801630964,16.1483144872596,12.2840519560608,9.56696437053856,16.3494125121187,18.8562294703147,20.6438937158699,18.0807462450542,55.2801211332244,34.1583451682671,26.957397449256,22.371020801516,23.7989966797713,15.1116893658589,29.8897152025928,24.6414787903535,25.5608844639788,33.4043432252993,33.5123945937701,22.6137327686618,21.5490432258321,28.2318250311499,25.4805239706646,7.11066703153331,29.6592726185363,31.9233430498624,33.8701378159905,18.1552368753305,54.6358934495532,29.9853120910946,36.9523746011869,34.7090645275841,30.4412456377997,28.9387469861035,26.4574591055336,26.1386509965725,36.337660256953,27.3292784578633,22.1152637987469,37.2063754879041,33.126227769059,30.0622656943838,27.9587641827183,13.4679166625312,9.84399522023239,27.5893619625279,45.2901170632379,44.9927048245056,42.3143856153305,18.4242486467932,26.0775343606617,20.8586224507355,18.9468509009581,17.6443665557928,19.3242881440391,19.7934340942664,29.8389336081427,24.010545327748,19.9650979162603,17.4666740385773,41.6385417480652,33.3358051428536,33.8516804034057,30.5930780206502,28.3712201461037,31.9003163509276,24.6435535592087,26.1290404446406,36.4309908056503,30.6351849871867,33.7826158394782,43.6199507530874,36.1461423993277,42.8350164822265,33.1309239616789,31.4474141573219,70.2213187313235,66.1384121284818,56.2643728803273,45.5676699578104,45.2635295763516,36.912722599508,40.0098603139005,42.1075455939444,32.2418265934621,32.7872862098075,33.2659017735528,35.4966640796195,31.4309313334748,27.9084688934462,23.3478171492064,23.8305979503292,30.7370161407471,24.0229489581065,20.8187049078486,21.4041593748912,13.5471701023357,33.5852219662701,35.4058495888488,41.1058909192976,47.5520932278524,40.9417554985385,31.1329261382818,29.6751976735592,19.455691523325,43.8099219565869,24.6308504624264,24.2726895890204,30.2194335034636,25.1669434423182,24.2074615859658,24.2952353370328,34.3298900725078,39.4157368503564,40.574784842309,34.0097717501675,28.7049681008086,33.3145144479013,23.1445725874782,24.6508947125936,19.6248409801719,23.4454611451421,22.8268522857105,48.8856159748156,56.6089905926025,47.670767825589,33.6747801504915,32.8000937263287,33.1013607315846,24.4541716833189,40.2095362402088,25.2596500133035,31.629005436018,23.0727387554472,22.1546747911338,28.2888343300765,28.1653939229402,25.0870631108951,27.3434721446575,46.6148872955392,49.3783878619338,41.9270361864715,29.3362810360628,26.6334949332487,27.6130623427776,28.8797798829542,31.369393677132,29.8977331025846,29.8180417389501,23.1047273749191,22.1036776788346,19.6722719670856,22.6186925908908,26.6513785071168,29.5058563811422,30.0771053472158,21.3532284683763,16.7612711826851,34.9181433652319,34.5885170269991,29.0267561862956,32.406415776621,26.2816545234015,21.0292542198246,33.4198011123591,30.5722653251939,27.1223170122179,29.5178416490425,32.4135977916149,18.6366363524648,31.6526390014439,27.2440373610901,24.7588178217436,23.5907275850726,39.8235415019888,37.6309986040221,36.5811503927349,31.6856533989909,25.986566573508,33.817866273832,31.0113951801865,38.8981090540931,29.5892824059319,35.3961168888114,30.5713964867496,33.0033738394198,23.1498931912576,33.1312413017611,22.8964870295475,22.7197257133488,28.9064580836906,22.2961022002588,19.5813334516524,15.8321773539592,40.5982054950219,37.0706124011685,25.1402373782657,33.307023094179,41.6578220875436,42.1587345247809,40.7059693050695,40.8710840365203,29.7310453362448,18.3571048990405,33.8324343979748,34.8793806857846,39.0760452750092,28.632005464713,31.5763666035568,31.8001660757066,37.2252761686543,37.3670377704167,35.7937932153458,36.2774834845743,46.1850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| |||
|short_description=p1@Ltv1 | |||
}} | |||
Revision as of 16:14, 12 September 2013
| Short description: | p1@Ltv1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ltv1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:101 |
| Association with transcript: | 0bp_to_ENSMUST00000019950, NM_181470, uc007ekp.1_5end |
| EntrezGene: | Ltv1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 3.48e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 3.48e-08 | 32 |
| hematopoietic stem cell | 3.48e-08 | 32 |
| hematopoietic multipotent progenitor cell | 3.48e-08 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
