FFCP PHASE1:Mm9::chr2:132607372..132607386,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12653|HGNC=|MCL_coexpression_id=278|UniProt=P16014,E9Q957,Q3TY66|association_with_transcript=358bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end|description=CAGE_peak_2_at_Chgb_5end|id=chr2:132607372..132607386,+|ontology_enrichment_celltype=CL:0000540!8.55e-11!33;CL:0000047!8.55e-11!33;CL:0000031!8.55e-11!33;CL:0000404!8.55e-11!33;CL:0000117!1.52e-09!23;CL:0000337!1.52e-09!23;CL:0000393!3.84e-07!39;CL:0000211!3.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,2.59e-10,33;CL:0000047,2.59e-10,33;CL:0000031,2.59e-10,33;CL:0000404,2.59e-10,33;CL:0000117,7.42e-10,23;CL:0000337,7.42e-10,23;CL:0000393,3.58e-07,39;CL:0000211,3.58e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.72e-30!71;UBERON:0003075!2.72e-30!71;UBERON:0007284!2.72e-30!71;UBERON:0004121!1.36e-25!102;UBERON:0000924!1.36e-25!102;UBERON:0006601!1.36e-25!102;UBERON:0001017!8.30e-25!73;UBERON:0005743!8.30e-25!73;UBERON:0000073!2.41e-24!75;UBERON:0001016!2.41e-24!75;UBERON:0000033!6.07e-23!63;UBERON:0001049!1.19e-21!52;UBERON:0005068!1.19e-21!52;UBERON:0006241!1.19e-21!52;UBERON:0007135!1.19e-21!52;UBERON:0000955!3.78e-21!50;UBERON:0006238!3.78e-21!50;UBERON:0002616!2.10e-20!49;UBERON:0003056!3.09e-20!49;UBERON:0003080!1.80e-17!40;UBERON:0002780!7.77e-17!39;UBERON:0001890!7.77e-17!39;UBERON:0006240!7.77e-17!39;UBERON:0002020!2.83e-14!34;UBERON:0002791!8.38e-12!29;UBERON:0003528!8.38e-12!29;UBERON:0001893!8.38e-12!29;UBERON:0007811!3.08e-10!86;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0000956!4.36e-08!21;UBERON:0001869!4.36e-08!21;UBERON:0000203!4.36e-08!21;UBERON:0000153!1.03e-07!94;UBERON:0002619!4.11e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-27,64;UBERON:0003075,1.13e-27,64;UBERON:0007284,1.13e-27,64;UBERON:0001017,3.23e-26,73;UBERON:0000073,1.18e-25,54;UBERON:0001016,8.57e-25,75;UBERON:0001049,5.52e-24,52;UBERON:0005068,5.52e-24,52;UBERON:0006241,5.52e-24,52;UBERON:0007135,5.52e-24,52;UBERON:0010371,4.14e-23,73;UBERON:0004121,3.60e-22,95;UBERON:0000924,3.60e-22,95;UBERON:0006601,3.60e-22,95;UBERON:0003056,1.45e-21,49;UBERON:0000955,3.83e-21,47;UBERON:0006238,3.83e-21,47;UBERON:0010314,8.44e-21,92;UBERON:0002616,2.51e-20,46;UBERON:0003080,5.46e-19,40;UBERON:0002780,2.80e-18,39;UBERON:0001890,2.80e-18,39;UBERON:0006240,2.80e-18,39;UBERON:0002020,2.05e-15,34;UBERON:0003528,1.18e-12,29;UBERON:0002791,1.18e-12,29;UBERON:0001893,1.18e-12,29;UBERON:0002021,1.96e-09,10;UBERON:0000411,1.96e-09,10;UBERON:0001950,1.96e-09,10;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0002619,2.07e-07,17;UBERON:0001894,9.67e-07,10;UBERON:0006222,9.67e-07,10|phase1_expression=3.52327463630547,0.348975407639361,0,0.30246421130683,0.500895729946347,5.37213670118047,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,3.35984087866154,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,1.14014051673824,1.00812051903972,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,6.34789175126439,5.07065122804943,0,0,0,0,0,0,0.384218305321555,1.55534418462716,2.29510095163874,1.89292465216244,10.2834354385369,7.50953039235486,1.10241719293459,1.91690942036473,0.919218786610021,22.0231761998777,30.3895864642747,36.4047483817297,4.87979264601717,6.95306091378313,6.25096044668112,19.5428099300967,18.5711661310454,20.4749652020926,17.0884579574727,16.9422300150933,7.64237727883732,0.151452386666368,0.302286240427142,0,0,0,0,0,0,1.40444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,1.59857431606684,0,60.7128348775133,14.052311468057,21.3125834818499,11.761390360059,21.1011696773672,27.6333461768906,31.0396480584298,0,0,0,0,0,0,5.59175283654366,55.0427898381709,45.4499353785197,1.78819938646014,0,0,0,25.9137806170343,29.7375391832107,4.64921102817598,34.9386883586476,23.2701066170601,28.8825381937789,25.9586020908412,0,0,0,5.05060454127538,0.260240885925407,2.06911893990126,3.24111833649629,2.26057226753573,4.89862793889561,7.43059577652129,7.30873451565885,13.7112786491678,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,41.2168299185689,5.45394445610208,3.30418782983798,1.58670339998127,0.639864751605702,0.696710015581316,0.902072229254653,2.01683524623343,0.889512175379481,2.28270751335071,3.79623249235609,3.78807595865225,2.01068167040216,2.58643413653496,2.9244613067868,0,2.37751854862164,2.98711909881551,0.379335801906163,1.25673363870702,0,0.407302655690628,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,23.922037908181,25.6693593636925,0,0,1.57754109708128,2.34263246577983,3.66219776145758,0.238968797952552,0.891194696329576,1.41538265394416,2.42886421004937,2.33804686329049,2.37172666767914,42.4144137676785,0,0,0.162886959353576,0,1.32745138339963,5.82673526771955,4.53485335447127,5.09233715340925,7.38254732201932,9.83792473420568,9.30341855405596,12.7236805317127,10.6949213515416,3.47640433729398,1.05418608574999,3.09406629744561,316.608833351023,2.52085531643834,1.29358683782755,5.5727629108214,20.2167866352192,30.6794366275561,24.1887060285118,21.312546438022,0,0,0.882113592219848,0,0,0,0,0,2.04036585640896,17.8008289930089,0,0,0,0,0,0,0,0,0,3.81868247206045,0.474503990371703,1.82987520414164,0.648032044930808,1.04544148007234,1.09181281873089,1.48350781023303,1.48776220305605,3.14107130380836,1.55537967950151,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,49.1334103076848,56.6200040903828,49.2690141557881,44.8536805917025,31.5137959094495,27.9495742034189,37.1262375127493,40.0785870869556,52.1113770331835,53.3293121104374,0.103787347584177,1.59609949360412,2.73173769206615,0.729320151204882,1.25767897576789,1.2869045591501,0.888986911206461,1.03017528619447,2.56735367673452,1.01078884705519,1.52087579934144,1.88626341386076,1.591905626988,1.60062881012173,1.89537047553524,1.42888107384922,1.85414921511769,0.77163688185482,1.64834360321323,2.20798380201596,2.05721551431249,1.24233064311536,2.86123427936785,1.0174249164263,2.35273451038327,1.26921911837515,2.19513567447327,2.10455769150274,1.90125759384206,1.68342681497322,1.06771516311757,1.47756723563345,2.04615521584845,1.85924209423159,1.35034627686799,1.24905288968973,1.63752125911786,1.50409737833809,1.72159498861959,0.882365676478062,0.695603506861264|short_description=p2@Chgb}} | ||
|EntrezGene=12653 | |||
|HGNC= | |||
|MCL_coexpression_id=278 | |||
|UniProt=P16014,E9Q957,Q3TY66 | |||
|association_with_transcript=358bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end | |||
|description=CAGE_peak_2_at_Chgb_5end | |||
|id=chr2:132607372..132607386,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.55e-11!33;CL:0000047!8.55e-11!33;CL:0000031!8.55e-11!33;CL:0000404!8.55e-11!33;CL:0000117!1.52e-09!23;CL:0000337!1.52e-09!23;CL:0000393!3.84e-07!39;CL:0000211!3.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.59e-10,33;CL:0000047,2.59e-10,33;CL:0000031,2.59e-10,33;CL:0000404,2.59e-10,33;CL:0000117,7.42e-10,23;CL:0000337,7.42e-10,23;CL:0000393,3.58e-07,39;CL:0000211,3.58e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.72e-30!71;UBERON:0003075!2.72e-30!71;UBERON:0007284!2.72e-30!71;UBERON:0004121!1.36e-25!102;UBERON:0000924!1.36e-25!102;UBERON:0006601!1.36e-25!102;UBERON:0001017!8.30e-25!73;UBERON:0005743!8.30e-25!73;UBERON:0000073!2.41e-24!75;UBERON:0001016!2.41e-24!75;UBERON:0000033!6.07e-23!63;UBERON:0001049!1.19e-21!52;UBERON:0005068!1.19e-21!52;UBERON:0006241!1.19e-21!52;UBERON:0007135!1.19e-21!52;UBERON:0000955!3.78e-21!50;UBERON:0006238!3.78e-21!50;UBERON:0002616!2.10e-20!49;UBERON:0003056!3.09e-20!49;UBERON:0003080!1.80e-17!40;UBERON:0002780!7.77e-17!39;UBERON:0001890!7.77e-17!39;UBERON:0006240!7.77e-17!39;UBERON:0002020!2.83e-14!34;UBERON:0002791!8.38e-12!29;UBERON:0003528!8.38e-12!29;UBERON:0001893!8.38e-12!29;UBERON:0007811!3.08e-10!86;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0000956!4.36e-08!21;UBERON:0001869!4.36e-08!21;UBERON:0000203!4.36e-08!21;UBERON:0000153!1.03e-07!94;UBERON:0002619!4.11e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-27,64;UBERON:0003075,1.13e-27,64;UBERON:0007284,1.13e-27,64;UBERON:0001017,3.23e-26,73;UBERON:0000073,1.18e-25,54;UBERON:0001016,8.57e-25,75;UBERON:0001049,5.52e-24,52;UBERON:0005068,5.52e-24,52;UBERON:0006241,5.52e-24,52;UBERON:0007135,5.52e-24,52;UBERON:0010371,4.14e-23,73;UBERON:0004121,3.60e-22,95;UBERON:0000924,3.60e-22,95;UBERON:0006601,3.60e-22,95;UBERON:0003056,1.45e-21,49;UBERON:0000955,3.83e-21,47;UBERON:0006238,3.83e-21,47;UBERON:0010314,8.44e-21,92;UBERON:0002616,2.51e-20,46;UBERON:0003080,5.46e-19,40;UBERON:0002780,2.80e-18,39;UBERON:0001890,2.80e-18,39;UBERON:0006240,2.80e-18,39;UBERON:0002020,2.05e-15,34;UBERON:0003528,1.18e-12,29;UBERON:0002791,1.18e-12,29;UBERON:0001893,1.18e-12,29;UBERON:0002021,1.96e-09,10;UBERON:0000411,1.96e-09,10;UBERON:0001950,1.96e-09,10;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0002619,2.07e-07,17;UBERON:0001894,9.67e-07,10;UBERON:0006222,9.67e-07,10 | |||
|phase1_expression=3.52327463630547,0.348975407639361,0,0.30246421130683,0.500895729946347,5.37213670118047,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,3.35984087866154,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,1.14014051673824,1.00812051903972,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,6.34789175126439,5.07065122804943,0,0,0,0,0,0,0.384218305321555,1.55534418462716,2.29510095163874,1.89292465216244,10.2834354385369,7.50953039235486,1.10241719293459,1.91690942036473,0.919218786610021,22.0231761998777,30.3895864642747,36.4047483817297,4.87979264601717,6.95306091378313,6.25096044668112,19.5428099300967,18.5711661310454,20.4749652020926,17.0884579574727,16.9422300150933,7.64237727883732,0.151452386666368,0.302286240427142,0,0,0,0,0,0,1.40444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,1.59857431606684,0,60.7128348775133,14.052311468057,21.3125834818499,11.761390360059,21.1011696773672,27.6333461768906,31.0396480584298,0,0,0,0,0,0,5.59175283654366,55.0427898381709,45.4499353785197,1.78819938646014,0,0,0,25.9137806170343,29.7375391832107,4.64921102817598,34.9386883586476,23.2701066170601,28.8825381937789,25.9586020908412,0,0,0,5.05060454127538,0.260240885925407,2.06911893990126,3.24111833649629,2.26057226753573,4.89862793889561,7.43059577652129,7.30873451565885,13.7112786491678,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,41.2168299185689,5.45394445610208,3.30418782983798,1.58670339998127,0.639864751605702,0.696710015581316,0.902072229254653,2.01683524623343,0.889512175379481,2.28270751335071,3.79623249235609,3.78807595865225,2.01068167040216,2.58643413653496,2.9244613067868,0,2.37751854862164,2.98711909881551,0.379335801906163,1.25673363870702,0,0.407302655690628,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,23.922037908181,25.6693593636925,0,0,1.57754109708128,2.34263246577983,3.66219776145758,0.238968797952552,0.891194696329576,1.41538265394416,2.42886421004937,2.33804686329049,2.37172666767914,42.4144137676785,0,0,0.162886959353576,0,1.32745138339963,5.82673526771955,4.53485335447127,5.09233715340925,7.38254732201932,9.83792473420568,9.30341855405596,12.7236805317127,10.6949213515416,3.47640433729398,1.05418608574999,3.09406629744561,316.608833351023,2.52085531643834,1.29358683782755,5.5727629108214,20.2167866352192,30.6794366275561,24.1887060285118,21.312546438022,0,0,0.882113592219848,0,0,0,0,0,2.04036585640896,17.8008289930089,0,0,0,0,0,0,0,0,0,3.81868247206045,0.474503990371703,1.82987520414164,0.648032044930808,1.04544148007234,1.09181281873089,1.48350781023303,1.48776220305605,3.14107130380836,1.55537967950151,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,49.1334103076848,56.6200040903828,49.2690141557881,44.8536805917025,31.5137959094495,27.9495742034189,37.1262375127493,40.0785870869556,52.1113770331835,53.3293121104374,0.103787347584177,1.59609949360412,2.73173769206615,0.729320151204882,1.25767897576789,1.2869045591501,0.888986911206461,1.03017528619447,2.56735367673452,1.01078884705519,1.52087579934144,1.88626341386076,1.591905626988,1.60062881012173,1.89537047553524,1.42888107384922,1.85414921511769,0.77163688185482,1.64834360321323,2.20798380201596,2.05721551431249,1.24233064311536,2.86123427936785,1.0174249164263,2.35273451038327,1.26921911837515,2.19513567447327,2.10455769150274,1.90125759384206,1.68342681497322,1.06771516311757,1.47756723563345,2.04615521584845,1.85924209423159,1.35034627686799,1.24905288968973,1.63752125911786,1.50409737833809,1.72159498861959,0.882365676478062,0.695603506861264 | |||
|short_description=p2@Chgb | |||
}} |
Revision as of 22:09, 13 September 2013
Short description: | p2@Chgb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chgb_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 358bp_to_ENSMUST00000028826, ENSMUST00000168530, NM_007694, uc008mnf.1_5end |
EntrezGene: | Chgb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.59e-10 | 33 |
neuronal stem cell | 2.59e-10 | 33 |
neuroblast | 2.59e-10 | 33 |
electrically signaling cell | 2.59e-10 | 33 |
CNS neuron (sensu Vertebrata) | 7.42e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.42e-10 | 23 |
electrically responsive cell | 3.58e-07 | 39 |
electrically active cell | 3.58e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.