FFCP PHASE1:Mm9::chr11:97265702..97265754,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1605|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:97265702..97265754,+|id=chr11:97265702..97265754,+|ontology_enrichment_celltype=CL:0000540!3.14e-17!33;CL:0000047!3.14e-17!33;CL:0000031!3.14e-17!33;CL:0000404!3.14e-17!33;CL:0002319!4.41e-15!43;CL:0000221!7.32e-15!44;CL:0000133!7.32e-15!44;CL:0000393!1.06e-14!39;CL:0000211!1.06e-14!39;CL:0000055!1.58e-12!50;CL:0000117!1.06e-11!23;CL:0000337!1.06e-11!23;CL:0000107!2.41e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,9.62e-19,33;CL:0000047,9.62e-19,33;CL:0000031,9.62e-19,33;CL:0000404,9.62e-19,33;CL:0000393,1.99e-15,39;CL:0000211,1.99e-15,39;CL:0002319,1.48e-14,43;CL:0000221,2.39e-14,44;CL:0000133,2.39e-14,44;CL:0000117,5.04e-13,23;CL:0000337,5.04e-13,23;CL:0000107,4.20e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.41e-27!73;UBERON:0005743!2.41e-27!73;UBERON:0000073!6.22e-27!75;UBERON:0001016!6.22e-27!75;UBERON:0004121!7.74e-24!102;UBERON:0000924!7.74e-24!102;UBERON:0006601!7.74e-24!102;UBERON:0002346!4.82e-20!71;UBERON:0003075!4.82e-20!71;UBERON:0007284!4.82e-20!71;UBERON:0001049!4.97e-17!52;UBERON:0005068!4.97e-17!52;UBERON:0006241!4.97e-17!52;UBERON:0007135!4.97e-17!52;UBERON:0000955!1.48e-15!50;UBERON:0006238!1.48e-15!50;UBERON:0002616!2.88e-15!49;UBERON:0002020!9.22e-15!34;UBERON:0000033!9.42e-15!63;UBERON:0003056!1.79e-12!49;UBERON:0003080!7.45e-12!40;UBERON:0002791!1.35e-11!29;UBERON:0003528!1.35e-11!29;UBERON:0001893!1.35e-11!29;UBERON:0002780!2.75e-11!39;UBERON:0001890!2.75e-11!39;UBERON:0006240!2.75e-11!39;UBERON:0000468!6.99e-08!333;UBERON:0000956!1.94e-07!21;UBERON:0001869!1.94e-07!21;UBERON:0000203!1.94e-07!21;UBERON:0002410!2.41e-07!9;UBERON:0002619!7.36e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-28,73;UBERON:0001016,1.88e-27,75;UBERON:0004121,2.08e-22,95;UBERON:0000924,2.08e-22,95;UBERON:0006601,2.08e-22,95;UBERON:0002346,6.00e-20,64;UBERON:0003075,6.00e-20,64;UBERON:0007284,6.00e-20,64;UBERON:0000073,4.05e-19,54;UBERON:0001049,1.55e-17,52;UBERON:0005068,1.55e-17,52;UBERON:0006241,1.55e-17,52;UBERON:0007135,1.55e-17,52;UBERON:0010371,7.61e-16,73;UBERON:0002020,1.46e-15,34;UBERON:0010314,8.61e-15,92;UBERON:0000955,6.17e-14,47;UBERON:0006238,6.17e-14,47;UBERON:0002616,1.28e-13,46;UBERON:0003056,1.30e-12,49;UBERON:0003080,3.29e-12,40;UBERON:0003528,4.83e-12,29;UBERON:0002791,4.83e-12,29;UBERON:0001893,4.83e-12,29;UBERON:0002780,1.38e-11,39;UBERON:0001890,1.38e-11,39;UBERON:0006240,1.38e-11,39;UBERON:0002410,4.20e-08,9;UBERON:0000956,1.93e-07,21;UBERON:0001869,1.93e-07,21;UBERON:0000203,1.93e-07,21;UBERON:0002021,7.61e-07,10;UBERON:0000411,7.61e-07,10;UBERON:0001950,7.61e-07,10;UBERON:0002619,9.44e-07,17|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411343300817216,0,2.55129870453209,0.496454756004426,0.783599367416806,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,1.28482726513177,1.56478268869608,0.65407546914134,0.659058548203415,0.58328969722285,0.279972843250725,2.87505128729943,0.167782606057736,0,0,0.257259436035947,2.57880095944881,1.54701627683233,10.3181395038395,11.1088105647127,14.5781222806421,0.677689064138264,0,0.449949858640699,0,0,3.89480143673926,4.2264013585371,3.21437798156281,2.16009501330705,2.52389953621658,19.4242669394586,13.4729809980484,5.75706756310284,3.73797336971122,2.75765635983006,14.3150645299205,15.0671058940522,13.8245879930619,14.6393779380515,13.2657083223494,10.4182674111352,8.37548997004143,11.2552522006336,10.8486755921535,17.3830865429464,19.2201769078789,12.4887628702951,0.757261933331841,1.36028808192214,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,1.12674735821344,0,0,0,0,0.253359865475099,0,0.5709193985953,0.258937883647172,0.742210695324124,3.81667718885499,4.56698217468212,2.7673859670727,3.16517545160507,3.29248379979973,0.376999773989026,0,0.289198713839823,0,1.7794353494215,0.220841518460394,0.484875253135222,0,10.8328894894272,12.5668024088073,0.255457055208591,0,0,0.508280908292259,14.2301107434582,6.40500843946077,14.3245961408665,8.16974304903699,10.2286182932132,17.2464076984435,11.356888414743,2.44414473240759,0.373220911830279,0,0.631325567659422,1.82168620147785,1.60931473103431,3.06105620669094,3.91832526372859,3.74200745332303,3.58718416797579,2.43624483855295,2.58703370739016,1.29340795759705,3.02569728268511,4.22282697993477,2.19195732427575,3.33656699070717,3.1342694986995,2.26360350048738,2.7864797354589,0,0,0.284163499395593,2.48550927042602,2.57978665979206,1.44049649168812,2.84093682702252,1.18058539048442,1.69693824176116,2.09280550275367,1.07309360559848,0.817357396570186,0.987359099480883,0,0,0.146199987425332,0,0.134206418760372,7.78072809687271,11.936935035997,0.330418782983798,0,2.55945900642281,3.25131340604614,2.31961430379768,2.01683524623343,1.77902435075896,1.14135375667535,0.474529061544512,1.81168850196412,0.502670417600539,1.1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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1605 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:97265702..97265754,+ | |||
|id=chr11:97265702..97265754,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.14e-17!33;CL:0000047!3.14e-17!33;CL:0000031!3.14e-17!33;CL:0000404!3.14e-17!33;CL:0002319!4.41e-15!43;CL:0000221!7.32e-15!44;CL:0000133!7.32e-15!44;CL:0000393!1.06e-14!39;CL:0000211!1.06e-14!39;CL:0000055!1.58e-12!50;CL:0000117!1.06e-11!23;CL:0000337!1.06e-11!23;CL:0000107!2.41e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.62e-19,33;CL:0000047,9.62e-19,33;CL:0000031,9.62e-19,33;CL:0000404,9.62e-19,33;CL:0000393,1.99e-15,39;CL:0000211,1.99e-15,39;CL:0002319,1.48e-14,43;CL:0000221,2.39e-14,44;CL:0000133,2.39e-14,44;CL:0000117,5.04e-13,23;CL:0000337,5.04e-13,23;CL:0000107,4.20e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.41e-27!73;UBERON:0005743!2.41e-27!73;UBERON:0000073!6.22e-27!75;UBERON:0001016!6.22e-27!75;UBERON:0004121!7.74e-24!102;UBERON:0000924!7.74e-24!102;UBERON:0006601!7.74e-24!102;UBERON:0002346!4.82e-20!71;UBERON:0003075!4.82e-20!71;UBERON:0007284!4.82e-20!71;UBERON:0001049!4.97e-17!52;UBERON:0005068!4.97e-17!52;UBERON:0006241!4.97e-17!52;UBERON:0007135!4.97e-17!52;UBERON:0000955!1.48e-15!50;UBERON:0006238!1.48e-15!50;UBERON:0002616!2.88e-15!49;UBERON:0002020!9.22e-15!34;UBERON:0000033!9.42e-15!63;UBERON:0003056!1.79e-12!49;UBERON:0003080!7.45e-12!40;UBERON:0002791!1.35e-11!29;UBERON:0003528!1.35e-11!29;UBERON:0001893!1.35e-11!29;UBERON:0002780!2.75e-11!39;UBERON:0001890!2.75e-11!39;UBERON:0006240!2.75e-11!39;UBERON:0000468!6.99e-08!333;UBERON:0000956!1.94e-07!21;UBERON:0001869!1.94e-07!21;UBERON:0000203!1.94e-07!21;UBERON:0002410!2.41e-07!9;UBERON:0002619!7.36e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-28,73;UBERON:0001016,1.88e-27,75;UBERON:0004121,2.08e-22,95;UBERON:0000924,2.08e-22,95;UBERON:0006601,2.08e-22,95;UBERON:0002346,6.00e-20,64;UBERON:0003075,6.00e-20,64;UBERON:0007284,6.00e-20,64;UBERON:0000073,4.05e-19,54;UBERON:0001049,1.55e-17,52;UBERON:0005068,1.55e-17,52;UBERON:0006241,1.55e-17,52;UBERON:0007135,1.55e-17,52;UBERON:0010371,7.61e-16,73;UBERON:0002020,1.46e-15,34;UBERON:0010314,8.61e-15,92;UBERON:0000955,6.17e-14,47;UBERON:0006238,6.17e-14,47;UBERON:0002616,1.28e-13,46;UBERON:0003056,1.30e-12,49;UBERON:0003080,3.29e-12,40;UBERON:0003528,4.83e-12,29;UBERON:0002791,4.83e-12,29;UBERON:0001893,4.83e-12,29;UBERON:0002780,1.38e-11,39;UBERON:0001890,1.38e-11,39;UBERON:0006240,1.38e-11,39;UBERON:0002410,4.20e-08,9;UBERON:0000956,1.93e-07,21;UBERON:0001869,1.93e-07,21;UBERON:0000203,1.93e-07,21;UBERON:0002021,7.61e-07,10;UBERON:0000411,7.61e-07,10;UBERON:0001950,7.61e-07,10;UBERON:0002619,9.44e-07,17 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411343300817216,0,2.55129870453209,0.496454756004426,0.783599367416806,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,1.28482726513177,1.56478268869608,0.65407546914134,0.659058548203415,0.58328969722285,0.279972843250725,2.87505128729943,0.167782606057736,0,0,0.257259436035947,2.57880095944881,1.54701627683233,10.3181395038395,11.1088105647127,14.5781222806421,0.677689064138264,0,0.449949858640699,0,0,3.89480143673926,4.2264013585371,3.21437798156281,2.16009501330705,2.52389953621658,19.4242669394586,13.4729809980484,5.75706756310284,3.73797336971122,2.75765635983006,14.3150645299205,15.0671058940522,13.8245879930619,14.6393779380515,13.2657083223494,10.4182674111352,8.37548997004143,11.2552522006336,10.8486755921535,17.3830865429464,19.2201769078789,12.4887628702951,0.757261933331841,1.36028808192214,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,1.12674735821344,0,0,0,0,0.253359865475099,0,0.5709193985953,0.258937883647172,0.742210695324124,3.81667718885499,4.56698217468212,2.7673859670727,3.16517545160507,3.29248379979973,0.376999773989026,0,0.289198713839823,0,1.7794353494215,0.220841518460394,0.484875253135222,0,10.8328894894272,12.5668024088073,0.255457055208591,0,0,0.508280908292259,14.2301107434582,6.40500843946077,14.3245961408665,8.16974304903699,10.2286182932132,17.2464076984435,11.356888414743,2.44414473240759,0.373220911830279,0,0.631325567659422,1.82168620147785,1.60931473103431,3.06105620669094,3.91832526372859,3.74200745332303,3.58718416797579,2.43624483855295,2.58703370739016,1.29340795759705,3.02569728268511,4.22282697993477,2.19195732427575,3.33656699070717,3.1342694986995,2.26360350048738,2.7864797354589,0,0,0.284163499395593,2.48550927042602,2.57978665979206,1.44049649168812,2.84093682702252,1.18058539048442,1.69693824176116,2.09280550275367,1.07309360559848,0.817357396570186,0.987359099480883,0,0,0.146199987425332,0,0.134206418760372,7.78072809687271,11.936935035997,0.330418782983798,0,2.55945900642281,3.25131340604614,2.31961430379768,2.01683524623343,1.77902435075896,1.14135375667535,0.474529061544512,1.81168850196412,0.502670417600539,1.1937388322469,0.779856348476481,0,0.648414149624083,0.199141273254367,1.13800740571849,1.82797620175566,0,0.610953983535943,1.35766741017338,0.631222379012867,0.505892296994058,0.147610147979602,0.470996183524124,0.493588655687202,0,0.667380422864376,0.393117990226406,0,0,0,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,2.08440552947533,1.14075483509418,1.35796068620151,0,0.335012514883631,0.476087281772027,0.585400943573396,1.26108115284953,0.8858587585951,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,7.22477654945064,8.08760637486202,0,0.252470927204373,13.2513452154828,10.1514073517126,20.4652227846159,21.0292542198246,19.1606859710859,22.0799694015289,16.5972387686707,21.3346776275258,23.7172666767914,4.17717711348349,0.425820255624806,3.02711526234334,5.37526965866801,1.15479086080775,0,1.94224508923985,1.209294227859,0.943025398779491,0.885905678642318,0.614870295887855,1.29214146584111,0,0.712994756769443,0.316036757935816,0,0,0,1.08036656418786,1.55230420539305,0.857348140126369,1.59606210278046,2.49716344642899,2.30368628842969,3.04464949114599,0.469343416127421,0.42366414172764,1.10264199027481,1.15420377059036,1.77610869365496,0.301564624640779,0.596861720015682,0.328281799490123,0.291480836629851,6.86073617438886,0.341741761595705,2.06386867963222,0.555583582109135,0,0.546776910884101,0.457556346413045,0,0,0,0,2.84702394223022,3.86306987541013,2.37611749807963,2.09088296014469,1.31017538247707,2.29269388854195,1.98368293740806,0.523511883968059,0.777689839750757,0.621339313086926,0,4.03694674318743,3.14371131868485,4.27792614356905,5.94135187997563,2.70329800785245,3.63807439801837,2.604087696879,4.29923312145414,2.17425708743405,0.576060012515731,0,0.810900861160657,0.205421914329655,0.77952493786677,0.537080087002444,0.198681354781265,0.360586348559907,0.295379054349154,0.302899349844443,0.15241361331,0.201652370273681,0.194915761479505,0.192423683280659,0,0,2.21985953374065,1.79427713218951,1.00730769818447,2.70465431645067,0.750729901804728,0.36630324853453,0,0,14.6835479080437,8.74617949363636,12.0308057822273,9.96748457593388,6.85082519770642,10.5755145634558,8.10027000278167,7.65546045481175,6.34399372577886,8.80192529978094,1.3492355185943,1.99512436700516,4.26834014385335,4.61902762429759,3.14419743941973,3.12533964365024,3.55594764482584,5.15087643097235,5.45562656306086,4.80124702351215,5.32306529769503,4.14977951049368,4.30750934361459,4.28968521112624,4.59483751644906,3.81034953026459,4.28772005995965,4.82273051159263,4.12085900803307,4.56316652416632,4.11443102862498,4.61437096014278,3.81497903915713,4.21504608233753,3.95259397744389,4.39995961036718,6.95126296916536,2.63069711437843,4.6173398707593,2.80571135828869,5.10130577933949,4.0386837773981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| |||
|short_description=p@chr11:97265702..97265754,+ | |||
}} |
Revision as of 21:43, 12 September 2013
Short description: | p@chr11:97265702..97265754, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:97265702..97265754, + |
Coexpression cluster: | MCL_coexpression_mm9:1605 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.62e-19 | 33 |
neuronal stem cell | 9.62e-19 | 33 |
neuroblast | 9.62e-19 | 33 |
electrically signaling cell | 9.62e-19 | 33 |
electrically responsive cell | 1.99e-15 | 39 |
electrically active cell | 1.99e-15 | 39 |
neural cell | 1.48e-14 | 43 |
ectodermal cell | 2.39e-14 | 44 |
neurectodermal cell | 2.39e-14 | 44 |
CNS neuron (sensu Vertebrata) | 5.04e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.04e-13 | 23 |
autonomic neuron | 4.20e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.