FFCP PHASE1:Mm9::chr5:53981417..53981431,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=231|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:53981417..53981431,-|id=chr5:53981417..53981431,-|ontology_enrichment_celltype=CL:0000144!1.25e-14!121;CL:0000012!1.25e-14!121;CL:0000063!1.44e-14!66;CL:0002371!1.20e-12!118;CL:0000548!1.02e-11!115;CL:0000004!1.02e-11!115;CL:0000255!1.02e-11!115;CL:0000034!3.56e-10!97;CL:0002563!3.10e-09!9;CL:0002251!3.10e-09!9;CL:0002320!1.24e-08!46;CL:0000134!1.24e-08!46;CL:0000723!1.34e-08!91;CL:0000048!1.34e-08!91;CL:0000219!3.79e-08!54;CL:0002076!3.01e-07!15;CL:0000239!7.09e-07!6;CL:0000677!7.09e-07!6;CL:0000212!7.09e-07!6;CL:0000584!7.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0002320,4.72e-16,46;CL:0000134,4.72e-16,46;CL:0000893,2.60e-15,6;CL:0002489,2.60e-15,6;CL:0000898,2.60e-15,6;CL:0000809,2.60e-15,6;CL:0000810,2.60e-15,6;CL:0000895,2.60e-15,6;CL:0000808,2.60e-15,6;CL:0000894,2.60e-15,6;CL:0000806,2.60e-15,6;CL:0000807,2.60e-15,6;CL:0000805,2.60e-15,6;CL:0002425,2.60e-15,6;CL:0002436,2.60e-15,6;CL:0002427,2.60e-15,6;CL:0002428,2.60e-15,6;CL:0002429,2.60e-15,6;CL:0002433,2.60e-15,6;CL:0002431,2.60e-15,6;CL:0002432,2.60e-15,6;CL:0000219,1.93e-13,54;CL:0000624,1.53e-11,8;CL:0000988,2.24e-10,32;CL:0002032,2.24e-10,32;CL:0000037,2.24e-10,32;CL:0000837,2.24e-10,32;CL:0000791,2.78e-10,9;CL:0000789,2.78e-10,9;CL:0002420,2.78e-10,9;CL:0002419,2.78e-10,9;CL:0000790,2.78e-10,9;CL:0002563,8.29e-10,9;CL:0002251,8.29e-10,9;CL:0000723,9.69e-09,91;CL:0000048,9.69e-09,91;CL:0000239,1.55e-08,6;CL:0000677,1.55e-08,6;CL:0000584,1.55e-08,6;CL:0000084,1.91e-08,11;CL:0000827,1.91e-08,11;CL:0000738,3.82e-08,17;CL:0002087,3.82e-08,17;CL:0000034,4.37e-08,97;CL:0000838,9.39e-08,12;CL:0000075,2.18e-07,7;CL:0000213,2.75e-07,1;CL:0002078,2.75e-07,1;CL:0000115,2.75e-07,1;CL:0002262,2.75e-07,1;CL:1000398,2.75e-07,1;CL:0000542,3.62e-07,13;CL:0000051,3.62e-07,13;CL:0000223,8.76e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!3.10e-09!9;UBERON:0004808!3.10e-09!9;UBERON:0001277!3.10e-09!9;UBERON:0002384!1.24e-08!46;UBERON:0000485!4.17e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.72e-16,46;UBERON:0003350,8.29e-10,9;UBERON:0004808,8.29e-10,9;UBERON:0001277,8.29e-10,9;UBERON:0000485,4.63e-08,11;UBERON:0002394,2.75e-07,1;UBERON:0001281,2.75e-07,1;UBERON:0000353,2.75e-07,1;UBERON:0003497,2.75e-07,1;UBERON:0003909,2.75e-07,1;UBERON:0003928,2.75e-07,1;UBERON:0003835,2.75e-07,1;UBERON:0003513,2.75e-07,1;UBERON:0001280,2.75e-07,1;UBERON:0004647,2.75e-07,1;UBERON:0002294,2.75e-07,1;UBERON:0001173,2.75e-07,1;UBERON:0004912,2.75e-07,1;UBERON:0005171,2.75e-07,1;UBERON:0003929,4.21e-07,55;UBERON:0001242,7.58e-07,13;UBERON:0001262,7.58e-07,13;UBERON:0004786,7.58e-07,13|phase1_expression=0,1.04692622291808,1.36499771816861,0.30246421130683,1.00179145989269,0.839396359559449,0.233612640595526,0.645616617207881,3.09735188733667,3.97909694747389,1.54096171402954,1.03703806693937,0,0.174840804837995,0,0,0,0,0,0,0,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0,0,0,0.635030673459631,0.61506478758457,0,1.44425809875637,0.498703936075477,0.204169356262369,0.418531630736908,0.7813353445238,0,0,0,0,0.629484089877886,0.506884656097573,0.367093504323363,0,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0.988866362566974,1.4209602298922,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,5.50742528533188,0,0,0,0,0,0,0.170430322578058,1.03914401841148,3.18005617059306,0,0,0,0,0.649473123033642,0.760079596425296,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,1.43778149407104,2.39961092397363,0.508280908292259,0,0,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,2.83082697826187,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0.477937595905104,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.979660166265606,0.690999869022119,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr5:53981417..53981431,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=231 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:53981417..53981431,- | |||
|id=chr5:53981417..53981431,- | |||
|ontology_enrichment_celltype=CL:0000144!1.25e-14!121;CL:0000012!1.25e-14!121;CL:0000063!1.44e-14!66;CL:0002371!1.20e-12!118;CL:0000548!1.02e-11!115;CL:0000004!1.02e-11!115;CL:0000255!1.02e-11!115;CL:0000034!3.56e-10!97;CL:0002563!3.10e-09!9;CL:0002251!3.10e-09!9;CL:0002320!1.24e-08!46;CL:0000134!1.24e-08!46;CL:0000723!1.34e-08!91;CL:0000048!1.34e-08!91;CL:0000219!3.79e-08!54;CL:0002076!3.01e-07!15;CL:0000239!7.09e-07!6;CL:0000677!7.09e-07!6;CL:0000212!7.09e-07!6;CL:0000584!7.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.72e-16,46;CL:0000134,4.72e-16,46;CL:0000893,2.60e-15,6;CL:0002489,2.60e-15,6;CL:0000898,2.60e-15,6;CL:0000809,2.60e-15,6;CL:0000810,2.60e-15,6;CL:0000895,2.60e-15,6;CL:0000808,2.60e-15,6;CL:0000894,2.60e-15,6;CL:0000806,2.60e-15,6;CL:0000807,2.60e-15,6;CL:0000805,2.60e-15,6;CL:0002425,2.60e-15,6;CL:0002436,2.60e-15,6;CL:0002427,2.60e-15,6;CL:0002428,2.60e-15,6;CL:0002429,2.60e-15,6;CL:0002433,2.60e-15,6;CL:0002431,2.60e-15,6;CL:0002432,2.60e-15,6;CL:0000219,1.93e-13,54;CL:0000624,1.53e-11,8;CL:0000988,2.24e-10,32;CL:0002032,2.24e-10,32;CL:0000037,2.24e-10,32;CL:0000837,2.24e-10,32;CL:0000791,2.78e-10,9;CL:0000789,2.78e-10,9;CL:0002420,2.78e-10,9;CL:0002419,2.78e-10,9;CL:0000790,2.78e-10,9;CL:0002563,8.29e-10,9;CL:0002251,8.29e-10,9;CL:0000723,9.69e-09,91;CL:0000048,9.69e-09,91;CL:0000239,1.55e-08,6;CL:0000677,1.55e-08,6;CL:0000584,1.55e-08,6;CL:0000084,1.91e-08,11;CL:0000827,1.91e-08,11;CL:0000738,3.82e-08,17;CL:0002087,3.82e-08,17;CL:0000034,4.37e-08,97;CL:0000838,9.39e-08,12;CL:0000075,2.18e-07,7;CL:0000213,2.75e-07,1;CL:0002078,2.75e-07,1;CL:0000115,2.75e-07,1;CL:0002262,2.75e-07,1;CL:1000398,2.75e-07,1;CL:0000542,3.62e-07,13;CL:0000051,3.62e-07,13;CL:0000223,8.76e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.10e-09!9;UBERON:0004808!3.10e-09!9;UBERON:0001277!3.10e-09!9;UBERON:0002384!1.24e-08!46;UBERON:0000485!4.17e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.72e-16,46;UBERON:0003350,8.29e-10,9;UBERON:0004808,8.29e-10,9;UBERON:0001277,8.29e-10,9;UBERON:0000485,4.63e-08,11;UBERON:0002394,2.75e-07,1;UBERON:0001281,2.75e-07,1;UBERON:0000353,2.75e-07,1;UBERON:0003497,2.75e-07,1;UBERON:0003909,2.75e-07,1;UBERON:0003928,2.75e-07,1;UBERON:0003835,2.75e-07,1;UBERON:0003513,2.75e-07,1;UBERON:0001280,2.75e-07,1;UBERON:0004647,2.75e-07,1;UBERON:0002294,2.75e-07,1;UBERON:0001173,2.75e-07,1;UBERON:0004912,2.75e-07,1;UBERON:0005171,2.75e-07,1;UBERON:0003929,4.21e-07,55;UBERON:0001242,7.58e-07,13;UBERON:0001262,7.58e-07,13;UBERON:0004786,7.58e-07,13 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,0.30246421130683,1.00179145989269,0.839396359559449,0.233612640595526,0.645616617207881,3.09735188733667,3.97909694747389,1.54096171402954,1.03703806693937,0,0.174840804837995,0,0,0,0,0,0,0,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0,0,0,0.635030673459631,0.61506478758457,0,1.44425809875637,0.498703936075477,0.204169356262369,0.418531630736908,0.7813353445238,0,0,0,0,0.629484089877886,0.506884656097573,0.367093504323363,0,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0.988866362566974,1.4209602298922,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,5.50742528533188,0,0,0,0,0,0,0.170430322578058,1.03914401841148,3.18005617059306,0,0,0,0,0.649473123033642,0.760079596425296,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,1.43778149407104,2.39961092397363,0.508280908292259,0,0,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,2.83082697826187,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0.477937595905104,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.979660166265606,0.690999869022119,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr5:53981417..53981431,- | |||
}} |
Revision as of 07:46, 14 September 2013
Short description: | p@chr5:53981417..53981431, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:53981417..53981431, - |
Coexpression cluster: | MCL_coexpression_mm9:231 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.72e-16 | 46 |
epithelium of mucosa | 8.29e-10 | 9 |
gastrointestinal system epithelium | 8.29e-10 | 9 |
intestinal epithelium | 8.29e-10 | 9 |
simple columnar epithelium | 4.63e-08 | 11 |
bile duct | 2.75e-07 | 1 |
hepatic sinusoid | 2.75e-07 | 1 |
parenchyma | 2.75e-07 | 1 |
abdomen blood vessel | 2.75e-07 | 1 |
sinusoid | 2.75e-07 | 1 |
digestive system duct | 2.75e-07 | 1 |
abdominal segment blood vessel | 2.75e-07 | 1 |
trunk blood vessel | 2.75e-07 | 1 |
liver parenchyma | 2.75e-07 | 1 |
liver lobule | 2.75e-07 | 1 |
biliary system | 2.75e-07 | 1 |
biliary tree | 2.75e-07 | 1 |
biliary bud | 2.75e-07 | 1 |
hepatic duct | 2.75e-07 | 1 |
gut epithelium | 4.21e-07 | 55 |
intestinal mucosa | 7.58e-07 | 13 |
wall of intestine | 7.58e-07 | 13 |
gastrointestinal system mucosa | 7.58e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.