FFCP PHASE1:Mm9::chr6:136366332..136366337,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=370|UniProt=|association_with_transcript=0bp_to_ENSMUST00000157784_5end|description=CAGE_peak_1_at_ENSMUST00000157784_5end|id=chr6:136366332..136366337,+|ontology_enrichment_celltype=CL:0000548!7.05e-34!115;CL:0000004!7.05e-34!115;CL:0000255!7.05e-34!115;CL:0002371!2.05e-32!118;CL:0000723!4.76e-31!91;CL:0000048!4.76e-31!91;CL:0000144!5.01e-31!121;CL:0000012!5.01e-31!121;CL:0000034!6.05e-30!97;CL:0000055!3.19e-27!50;CL:0002319!1.89e-26!43;CL:0002321!1.05e-25!70;CL:0000220!1.05e-25!70;CL:0000221!1.54e-25!44;CL:0000133!1.54e-25!44;CL:0000540!1.02e-23!33;CL:0000047!1.02e-23!33;CL:0000031!1.02e-23!33;CL:0000404!1.02e-23!33;CL:0000393!2.59e-23!39;CL:0000211!2.59e-23!39;CL:0000117!3.88e-17!23;CL:0000337!3.88e-17!23;CL:0000219!4.99e-13!54;CL:0002320!4.91e-11!46;CL:0000134!4.91e-11!46;CL:0000107!1.08e-08!9;CL:0000063!2.82e-08!66;CL:0002031!9.05e-08!25;CL:0000839!1.15e-07!13|ontology_enrichment_celltype_v019_2=CL:0002319,1.02e-27,43;CL:0000221,7.00e-27,44;CL:0000133,7.00e-27,44;CL:0000393,3.50e-25,39;CL:0000211,3.50e-25,39;CL:0000540,1.78e-24,33;CL:0000047,1.78e-24,33;CL:0000031,1.78e-24,33;CL:0000404,1.78e-24,33;CL:0002321,2.04e-24,70;CL:0000723,1.69e-23,91;CL:0000048,1.69e-23,91;CL:0000034,2.65e-21,97;CL:0000117,3.84e-15,23;CL:0000337,3.84e-15,23;CL:0000107,7.49e-12,9;CL:0000219,2.76e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.69e-22!73;UBERON:0005743!9.69e-22!73;UBERON:0000073!1.01e-20!75;UBERON:0001016!1.01e-20!75;UBERON:0002020!9.35e-20!34;UBERON:0002791!9.83e-17!29;UBERON:0003528!9.83e-17!29;UBERON:0001893!9.83e-17!29;UBERON:0000956!1.94e-13!21;UBERON:0001869!1.94e-13!21;UBERON:0000203!1.94e-13!21;UBERON:0002619!1.81e-12!17;UBERON:0001049!1.92e-11!52;UBERON:0005068!1.92e-11!52;UBERON:0006241!1.92e-11!52;UBERON:0007135!1.92e-11!52;UBERON:0004121!3.88e-11!102;UBERON:0000924!3.88e-11!102;UBERON:0006601!3.88e-11!102;UBERON:0002384!4.91e-11!46;UBERON:0002780!2.57e-10!39;UBERON:0001890!2.57e-10!39;UBERON:0006240!2.57e-10!39;UBERON:0002021!2.68e-10!10;UBERON:0000411!2.68e-10!10;UBERON:0001950!2.68e-10!10;UBERON:0002616!5.31e-10!49;UBERON:0003080!7.29e-10!40;UBERON:0000955!1.26e-09!50;UBERON:0006238!1.26e-09!50;UBERON:0002410!1.08e-08!9;UBERON:0002346!4.61e-08!71;UBERON:0003075!4.61e-08!71;UBERON:0007284!4.61e-08!71;UBERON:0002371!7.07e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-26,73;UBERON:0001016,1.21e-25,75;UBERON:0003528,6.23e-23,29;UBERON:0002791,6.23e-23,29;UBERON:0001893,6.23e-23,29;UBERON:0002020,5.30e-22,34;UBERON:0004121,7.29e-18,95;UBERON:0000924,7.29e-18,95;UBERON:0006601,7.29e-18,95;UBERON:0002619,8.63e-18,17;UBERON:0000956,1.05e-17,21;UBERON:0001869,1.05e-17,21;UBERON:0000203,1.05e-17,21;UBERON:0002780,2.42e-15,39;UBERON:0001890,2.42e-15,39;UBERON:0006240,2.42e-15,39;UBERON:0003080,8.50e-15,40;UBERON:0000073,1.14e-14,54;UBERON:0002616,1.67e-14,46;UBERON:0001049,2.76e-14,52;UBERON:0005068,2.76e-14,52;UBERON:0006241,2.76e-14,52;UBERON:0007135,2.76e-14,52;UBERON:0002021,3.62e-14,10;UBERON:0000411,3.62e-14,10;UBERON:0001950,3.62e-14,10;UBERON:0000955,4.78e-14,47;UBERON:0006238,4.78e-14,47;UBERON:0002346,1.54e-13,64;UBERON:0003075,1.54e-13,64;UBERON:0007284,1.54e-13,64;UBERON:0002410,7.49e-12,9;UBERON:0003056,6.49e-11,49;UBERON:0010371,6.93e-11,73;UBERON:0000010,2.38e-09,11;UBERON:0010314,2.39e-09,92|phase1_expression=0,0,0,0,1.50268718983904,0,0,0.516493293766305,0.563154888606667,0.936258105287974,0.513653904676515,0.558405112967355,0.513602189793617,0.611942816932982,1.33243904726265,0,0.699561878128147,1.10411757875383,0.137114433605739,2.12194825899015,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,19.6859508772486,9.22597181376855,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.52617609466313,1.5378032791413,4.08302788055995,2.65974201088189,0,0,0,0,1.28629718017973,2.29226751951005,2.57836046138721,1.82084814773638,4.7609188134483,5.70448263155561,2.03306719241479,0.889294796111139,1.7997994345628,5.93319817540185,4.9733608046227,0.898800331555214,1.53687322128622,0.311068836925433,2.29510095163874,1.68259969081106,1.14260393761521,0.883474163806454,1.83736198822431,3.35459148563827,4.5960939330501,0,1.53224805702225,0.921639199537461,4.08847491963601,4.20843160571084,2.6045668527838,1.11673199600552,1.12552522006336,3.81995619442025,0.883885756421003,0.711858403995515,1.4911955666024,0,0,0.289864488701678,1.72084775396277,0.679971333707751,1.61910957491345,3.24888208723835,3.58421509677868,0,0,0.519572009205738,0,0,0,2.54805239706646,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,4.52373851817817,3.80733978673097,0,0,0,0,0,0,1.26203287766503,2.34263246577983,3.87762115919038,1.43381278771531,2.00518806674155,1.69845918473299,2.42886421004937,2.04579100537918,2.76701444562566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,0,0,0,0,2.82375921308533,2.30162618253588,1.71868654031819,1.71853182343688,4.11049511862385,5.2877572817279,4.05013500139084,1.80128481289688,4.98456649882625,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p1@ENSMUST00000157784}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=370 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000157784_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000157784_5end | |||
|id=chr6:136366332..136366337,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.05e-34!115;CL:0000004!7.05e-34!115;CL:0000255!7.05e-34!115;CL:0002371!2.05e-32!118;CL:0000723!4.76e-31!91;CL:0000048!4.76e-31!91;CL:0000144!5.01e-31!121;CL:0000012!5.01e-31!121;CL:0000034!6.05e-30!97;CL:0000055!3.19e-27!50;CL:0002319!1.89e-26!43;CL:0002321!1.05e-25!70;CL:0000220!1.05e-25!70;CL:0000221!1.54e-25!44;CL:0000133!1.54e-25!44;CL:0000540!1.02e-23!33;CL:0000047!1.02e-23!33;CL:0000031!1.02e-23!33;CL:0000404!1.02e-23!33;CL:0000393!2.59e-23!39;CL:0000211!2.59e-23!39;CL:0000117!3.88e-17!23;CL:0000337!3.88e-17!23;CL:0000219!4.99e-13!54;CL:0002320!4.91e-11!46;CL:0000134!4.91e-11!46;CL:0000107!1.08e-08!9;CL:0000063!2.82e-08!66;CL:0002031!9.05e-08!25;CL:0000839!1.15e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.02e-27,43;CL:0000221,7.00e-27,44;CL:0000133,7.00e-27,44;CL:0000393,3.50e-25,39;CL:0000211,3.50e-25,39;CL:0000540,1.78e-24,33;CL:0000047,1.78e-24,33;CL:0000031,1.78e-24,33;CL:0000404,1.78e-24,33;CL:0002321,2.04e-24,70;CL:0000723,1.69e-23,91;CL:0000048,1.69e-23,91;CL:0000034,2.65e-21,97;CL:0000117,3.84e-15,23;CL:0000337,3.84e-15,23;CL:0000107,7.49e-12,9;CL:0000219,2.76e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.69e-22!73;UBERON:0005743!9.69e-22!73;UBERON:0000073!1.01e-20!75;UBERON:0001016!1.01e-20!75;UBERON:0002020!9.35e-20!34;UBERON:0002791!9.83e-17!29;UBERON:0003528!9.83e-17!29;UBERON:0001893!9.83e-17!29;UBERON:0000956!1.94e-13!21;UBERON:0001869!1.94e-13!21;UBERON:0000203!1.94e-13!21;UBERON:0002619!1.81e-12!17;UBERON:0001049!1.92e-11!52;UBERON:0005068!1.92e-11!52;UBERON:0006241!1.92e-11!52;UBERON:0007135!1.92e-11!52;UBERON:0004121!3.88e-11!102;UBERON:0000924!3.88e-11!102;UBERON:0006601!3.88e-11!102;UBERON:0002384!4.91e-11!46;UBERON:0002780!2.57e-10!39;UBERON:0001890!2.57e-10!39;UBERON:0006240!2.57e-10!39;UBERON:0002021!2.68e-10!10;UBERON:0000411!2.68e-10!10;UBERON:0001950!2.68e-10!10;UBERON:0002616!5.31e-10!49;UBERON:0003080!7.29e-10!40;UBERON:0000955!1.26e-09!50;UBERON:0006238!1.26e-09!50;UBERON:0002410!1.08e-08!9;UBERON:0002346!4.61e-08!71;UBERON:0003075!4.61e-08!71;UBERON:0007284!4.61e-08!71;UBERON:0002371!7.07e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-26,73;UBERON:0001016,1.21e-25,75;UBERON:0003528,6.23e-23,29;UBERON:0002791,6.23e-23,29;UBERON:0001893,6.23e-23,29;UBERON:0002020,5.30e-22,34;UBERON:0004121,7.29e-18,95;UBERON:0000924,7.29e-18,95;UBERON:0006601,7.29e-18,95;UBERON:0002619,8.63e-18,17;UBERON:0000956,1.05e-17,21;UBERON:0001869,1.05e-17,21;UBERON:0000203,1.05e-17,21;UBERON:0002780,2.42e-15,39;UBERON:0001890,2.42e-15,39;UBERON:0006240,2.42e-15,39;UBERON:0003080,8.50e-15,40;UBERON:0000073,1.14e-14,54;UBERON:0002616,1.67e-14,46;UBERON:0001049,2.76e-14,52;UBERON:0005068,2.76e-14,52;UBERON:0006241,2.76e-14,52;UBERON:0007135,2.76e-14,52;UBERON:0002021,3.62e-14,10;UBERON:0000411,3.62e-14,10;UBERON:0001950,3.62e-14,10;UBERON:0000955,4.78e-14,47;UBERON:0006238,4.78e-14,47;UBERON:0002346,1.54e-13,64;UBERON:0003075,1.54e-13,64;UBERON:0007284,1.54e-13,64;UBERON:0002410,7.49e-12,9;UBERON:0003056,6.49e-11,49;UBERON:0010371,6.93e-11,73;UBERON:0000010,2.38e-09,11;UBERON:0010314,2.39e-09,92 | |||
|phase1_expression=0,0,0,0,1.50268718983904,0,0,0.516493293766305,0.563154888606667,0.936258105287974,0.513653904676515,0.558405112967355,0.513602189793617,0.611942816932982,1.33243904726265,0,0.699561878128147,1.10411757875383,0.137114433605739,2.12194825899015,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,19.6859508772486,9.22597181376855,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.52617609466313,1.5378032791413,4.08302788055995,2.65974201088189,0,0,0,0,1.28629718017973,2.29226751951005,2.57836046138721,1.82084814773638,4.7609188134483,5.70448263155561,2.03306719241479,0.889294796111139,1.7997994345628,5.93319817540185,4.9733608046227,0.898800331555214,1.53687322128622,0.311068836925433,2.29510095163874,1.68259969081106,1.14260393761521,0.883474163806454,1.83736198822431,3.35459148563827,4.5960939330501,0,1.53224805702225,0.921639199537461,4.08847491963601,4.20843160571084,2.6045668527838,1.11673199600552,1.12552522006336,3.81995619442025,0.883885756421003,0.711858403995515,1.4911955666024,0,0,0.289864488701678,1.72084775396277,0.679971333707751,1.61910957491345,3.24888208723835,3.58421509677868,0,0,0.519572009205738,0,0,0,2.54805239706646,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,4.52373851817817,3.80733978673097,0,0,0,0,0,0,1.26203287766503,2.34263246577983,3.87762115919038,1.43381278771531,2.00518806674155,1.69845918473299,2.42886421004937,2.04579100537918,2.76701444562566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,0,0,0,0,2.82375921308533,2.30162618253588,1.71868654031819,1.71853182343688,4.11049511862385,5.2877572817279,4.05013500139084,1.80128481289688,4.98456649882625,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000157784 | |||
}} |
Revision as of 09:11, 14 September 2013
Short description: | p1@ENSMUST00000157784 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000157784_5end |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | 0bp_to_ENSMUST00000157784_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.02e-27 | 43 |
ectodermal cell | 7.00e-27 | 44 |
neurectodermal cell | 7.00e-27 | 44 |
electrically responsive cell | 3.50e-25 | 39 |
electrically active cell | 3.50e-25 | 39 |
neuron | 1.78e-24 | 33 |
neuronal stem cell | 1.78e-24 | 33 |
neuroblast | 1.78e-24 | 33 |
electrically signaling cell | 1.78e-24 | 33 |
embryonic cell | 2.04e-24 | 70 |
somatic stem cell | 1.69e-23 | 91 |
multi fate stem cell | 1.69e-23 | 91 |
stem cell | 2.65e-21 | 97 |
CNS neuron (sensu Vertebrata) | 3.84e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-15 | 23 |
autonomic neuron | 7.49e-12 | 9 |
motile cell | 2.76e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.