FFCP PHASE1:Mm9::chr2:152430060..152430086,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=266620|HGNC=|MCL_coexpression_id=70|UniProt=Q8K3U4,D3Z4L0|association_with_transcript=0bp_to_ENSMUST00000058086,NM_001037247,uc008nfu.2_5end|description=CAGE_peak_3_at_Defb36_5end|id=chr2:152430060..152430086,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!5.47e-33!15;UBERON:0000991!2.21e-31!18;UBERON:0005564!2.21e-31!18;UBERON:0003101!9.44e-31!16;UBERON:0000079!9.44e-31!16;UBERON:0000473!1.64e-30!14;UBERON:0004176!8.01e-29!17;UBERON:0009196!8.01e-29!17;UBERON:0009117!8.01e-29!17;UBERON:0003133!4.31e-26!24;UBERON:0005156!7.87e-24!26;UBERON:0000990!7.87e-24!26;UBERON:0002369!2.90e-19!7;UBERON:0006858!2.90e-19!7;UBERON:0003886!1.77e-17!38;UBERON:0002553!6.13e-17!39;UBERON:0002323!8.26e-16!37;UBERON:0004458!8.26e-16!37;UBERON:0003064!5.05e-15!14;UBERON:0002342!3.24e-13!10;UBERON:0005062!3.24e-13!10;UBERON:0000464!1.75e-10!57|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.52e-56,14;UBERON:0003135,1.51e-52,15;UBERON:0003101,3.05e-49,16;UBERON:0000079,3.05e-49,16;UBERON:0004176,2.53e-46,17;UBERON:0009196,2.53e-46,17;UBERON:0009117,2.53e-46,17;UBERON:0000991,9.94e-44,18;UBERON:0005564,9.94e-44,18;UBERON:0003133,1.09e-32,24;UBERON:0005156,3.86e-30,26;UBERON:0000990,3.86e-30,26;UBERON:0002323,5.04e-21,37;UBERON:0004458,5.04e-21,37;UBERON:0003886,1.87e-20,38;UBERON:0002553,6.46e-20,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.940709657085638,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4744810992099,0.448549638131936,1.65458490457098,1.55560950675238,4.52059382172059,5.06868376472335,4.22486059124714,9.89553324814021,22.3350403626764,11.3544536788223,9.21696020025169,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Defb36}} | ||
|EntrezGene=266620 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|UniProt=Q8K3U4,D3Z4L0 | |||
|association_with_transcript=0bp_to_ENSMUST00000058086,NM_001037247,uc008nfu.2_5end | |||
|description=CAGE_peak_3_at_Defb36_5end | |||
|id=chr2:152430060..152430086,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!5.47e-33!15;UBERON:0000991!2.21e-31!18;UBERON:0005564!2.21e-31!18;UBERON:0003101!9.44e-31!16;UBERON:0000079!9.44e-31!16;UBERON:0000473!1.64e-30!14;UBERON:0004176!8.01e-29!17;UBERON:0009196!8.01e-29!17;UBERON:0009117!8.01e-29!17;UBERON:0003133!4.31e-26!24;UBERON:0005156!7.87e-24!26;UBERON:0000990!7.87e-24!26;UBERON:0002369!2.90e-19!7;UBERON:0006858!2.90e-19!7;UBERON:0003886!1.77e-17!38;UBERON:0002553!6.13e-17!39;UBERON:0002323!8.26e-16!37;UBERON:0004458!8.26e-16!37;UBERON:0003064!5.05e-15!14;UBERON:0002342!3.24e-13!10;UBERON:0005062!3.24e-13!10;UBERON:0000464!1.75e-10!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.52e-56,14;UBERON:0003135,1.51e-52,15;UBERON:0003101,3.05e-49,16;UBERON:0000079,3.05e-49,16;UBERON:0004176,2.53e-46,17;UBERON:0009196,2.53e-46,17;UBERON:0009117,2.53e-46,17;UBERON:0000991,9.94e-44,18;UBERON:0005564,9.94e-44,18;UBERON:0003133,1.09e-32,24;UBERON:0005156,3.86e-30,26;UBERON:0000990,3.86e-30,26;UBERON:0002323,5.04e-21,37;UBERON:0004458,5.04e-21,37;UBERON:0003886,1.87e-20,38;UBERON:0002553,6.46e-20,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.940709657085638,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4744810992099,0.448549638131936,1.65458490457098,1.55560950675238,4.52059382172059,5.06868376472335,4.22486059124714,9.89553324814021,22.3350403626764,11.3544536788223,9.21696020025169,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Defb36 | |||
}} |
Revision as of 22:26, 13 September 2013
Short description: | p3@Defb36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Defb36_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | 0bp_to_ENSMUST00000058086, NM_001037247, uc008nfu.2_5end |
EntrezGene: | Defb36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.52e-56 | 14 |
male reproductive organ | 1.51e-52 | 15 |
male organism | 3.05e-49 | 16 |
male reproductive system | 3.05e-49 | 16 |
external genitalia | 2.53e-46 | 17 |
indifferent external genitalia | 2.53e-46 | 17 |
indifferent gonad | 2.53e-46 | 17 |
gonad | 9.94e-44 | 18 |
gonad primordium | 9.94e-44 | 18 |
reproductive organ | 1.09e-32 | 24 |
reproductive structure | 3.86e-30 | 26 |
reproductive system | 3.86e-30 | 26 |
body cavity | 5.04e-21 | 37 |
body cavity or lining | 5.04e-21 | 37 |
body cavity precursor | 1.87e-20 | 38 |
anatomical cavity | 6.46e-20 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.