FFCP PHASE1:Mm9::chr4:57003204..57003268,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230235|HGNC=|MCL_coexpression_id=1|UniProt=B1AXV0,A3KMM1,Q8BVG0|association_with_transcript=0bp_to_ENSMUST00000053681,NM_001142965,uc008sxx.2,uc012den.1_5end|description=CAGE_peak_1_at_6430704M03Rik_5end|id=chr4:57003204..57003268,-|ontology_enrichment_celltype=CL:0000117!1.05e-13!23;CL:0000337!1.05e-13!23;CL:0000540!3.53e-12!33;CL:0000047!3.53e-12!33;CL:0000031!3.53e-12!33;CL:0000404!3.53e-12!33;CL:0002319!5.47e-12!43;CL:0000221!6.83e-12!44;CL:0000133!6.83e-12!44;CL:0000393!1.37e-08!39;CL:0000211!1.37e-08!39;CL:0000055!1.96e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.56e-19,23;CL:0000337,3.56e-19,23;CL:0000540,8.93e-14,33;CL:0000047,8.93e-14,33;CL:0000031,8.93e-14,33;CL:0000404,8.93e-14,33;CL:0002319,7.40e-11,43;CL:0000221,2.10e-10,44;CL:0000133,2.10e-10,44;CL:0000393,2.50e-10,39;CL:0000211,2.50e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-28!73;UBERON:0005743!1.08e-28!73;UBERON:0000073!1.65e-28!75;UBERON:0001016!1.65e-28!75;UBERON:0001049!1.04e-24!52;UBERON:0005068!1.04e-24!52;UBERON:0006241!1.04e-24!52;UBERON:0007135!1.04e-24!52;UBERON:0004121!3.89e-24!102;UBERON:0000924!3.89e-24!102;UBERON:0006601!3.89e-24!102;UBERON:0000033!4.51e-24!63;UBERON:0000955!9.12e-24!50;UBERON:0006238!9.12e-24!50;UBERON:0002346!9.40e-24!71;UBERON:0003075!9.40e-24!71;UBERON:0007284!9.40e-24!71;UBERON:0002616!4.49e-23!49;UBERON:0002020!3.62e-21!34;UBERON:0003056!7.28e-21!49;UBERON:0003080!5.94e-19!40;UBERON:0002780!2.83e-18!39;UBERON:0001890!2.83e-18!39;UBERON:0006240!2.83e-18!39;UBERON:0002791!3.05e-18!29;UBERON:0003528!3.05e-18!29;UBERON:0001893!3.05e-18!29;UBERON:0000956!1.83e-13!21;UBERON:0001869!1.83e-13!21;UBERON:0000203!1.83e-13!21;UBERON:0002619!3.12e-11!17;UBERON:0007811!8.75e-11!86;UBERON:0000153!4.13e-10!94;UBERON:0002021!1.10e-08!10;UBERON:0000411!1.10e-08!10;UBERON:0001950!1.10e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-30,54;UBERON:0001017,1.06e-29,73;UBERON:0001016,2.23e-28,75;UBERON:0001049,4.02e-28,52;UBERON:0005068,4.02e-28,52;UBERON:0006241,4.02e-28,52;UBERON:0007135,4.02e-28,52;UBERON:0002020,1.90e-27,34;UBERON:0002346,2.20e-26,64;UBERON:0003075,2.20e-26,64;UBERON:0007284,2.20e-26,64;UBERON:0000955,6.87e-24,47;UBERON:0006238,6.87e-24,47;UBERON:0004121,9.98e-24,95;UBERON:0000924,9.98e-24,95;UBERON:0006601,9.98e-24,95;UBERON:0003528,3.19e-23,29;UBERON:0002791,3.19e-23,29;UBERON:0001893,3.19e-23,29;UBERON:0002616,5.72e-23,46;UBERON:0010371,7.20e-22,73;UBERON:0003056,4.23e-20,49;UBERON:0003080,1.12e-19,40;UBERON:0002780,9.06e-19,39;UBERON:0001890,9.06e-19,39;UBERON:0006240,9.06e-19,39;UBERON:0000956,2.39e-16,21;UBERON:0001869,2.39e-16,21;UBERON:0000203,2.39e-16,21;UBERON:0010314,7.13e-14,92;UBERON:0002619,3.90e-13,17;UBERON:0002021,6.75e-12,10;UBERON:0000411,6.75e-12,10;UBERON:0001950,6.75e-12,10;UBERON:0003076,5.83e-09,12;UBERON:0003057,5.83e-09,12;UBERON:0002420,5.29e-08,8;UBERON:0007245,5.29e-08,8;UBERON:0010009,5.29e-08,8;UBERON:0010011,5.29e-08,8;UBERON:0000454,5.29e-08,8;UBERON:0000025,8.16e-07,114|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,11.5658874605455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,8.09265843438391,6.87688273053643,10.1413024560989,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,8.29516898467821,7.96535036156975,9.25429829946081,11.7116903605559,9.49734726091938,8.08439274818697,5.94241920313065,5.51531271966013,31.9336054898227,40.6045735110897,33.4862242498611,9.49581271657396,9.05727671663856,12.5019208933622,20.3803589271008,21.9477417912355,26.1285003698345,15.9099436155781,16.0879999302986,12.4887628702951,0.302904773332736,0.302286240427142,0,0,0,0.539703191637817,0,0,1.82577746171277,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,1.02765491747154,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,53.8716666501247,57.1789509600732,0,0,0,0,33.1037313084658,45.292559679044,23.6230181972185,77.8732954461398,77.9932144857508,30.7526305948149,35.2063540857034,1.01839363850316,0,0,1.68353484709179,0.910843100738926,1.37941262660084,1.26043490863744,0.30140963567143,1.49680298132921,1.2811372028485,0.937017245597288,5.17406741478031,0,2.08016688184601,1.58356011747554,2.19195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,72.1294523574957,20.272208638719,0,0,0,0.232236671860439,0.77320476793256,0.403367049246685,0.22237804384487,0.760902504450237,0,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,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| ||
|EntrezGene=230235 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=B1AXV0,A3KMM1,Q8BVG0 | |||
|association_with_transcript=0bp_to_ENSMUST00000053681,NM_001142965,uc008sxx.2,uc012den.1_5end | |||
|description=CAGE_peak_1_at_6430704M03Rik_5end | |||
|id=chr4:57003204..57003268,- | |||
|ontology_enrichment_celltype=CL:0000117!1.05e-13!23;CL:0000337!1.05e-13!23;CL:0000540!3.53e-12!33;CL:0000047!3.53e-12!33;CL:0000031!3.53e-12!33;CL:0000404!3.53e-12!33;CL:0002319!5.47e-12!43;CL:0000221!6.83e-12!44;CL:0000133!6.83e-12!44;CL:0000393!1.37e-08!39;CL:0000211!1.37e-08!39;CL:0000055!1.96e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.56e-19,23;CL:0000337,3.56e-19,23;CL:0000540,8.93e-14,33;CL:0000047,8.93e-14,33;CL:0000031,8.93e-14,33;CL:0000404,8.93e-14,33;CL:0002319,7.40e-11,43;CL:0000221,2.10e-10,44;CL:0000133,2.10e-10,44;CL:0000393,2.50e-10,39;CL:0000211,2.50e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-28!73;UBERON:0005743!1.08e-28!73;UBERON:0000073!1.65e-28!75;UBERON:0001016!1.65e-28!75;UBERON:0001049!1.04e-24!52;UBERON:0005068!1.04e-24!52;UBERON:0006241!1.04e-24!52;UBERON:0007135!1.04e-24!52;UBERON:0004121!3.89e-24!102;UBERON:0000924!3.89e-24!102;UBERON:0006601!3.89e-24!102;UBERON:0000033!4.51e-24!63;UBERON:0000955!9.12e-24!50;UBERON:0006238!9.12e-24!50;UBERON:0002346!9.40e-24!71;UBERON:0003075!9.40e-24!71;UBERON:0007284!9.40e-24!71;UBERON:0002616!4.49e-23!49;UBERON:0002020!3.62e-21!34;UBERON:0003056!7.28e-21!49;UBERON:0003080!5.94e-19!40;UBERON:0002780!2.83e-18!39;UBERON:0001890!2.83e-18!39;UBERON:0006240!2.83e-18!39;UBERON:0002791!3.05e-18!29;UBERON:0003528!3.05e-18!29;UBERON:0001893!3.05e-18!29;UBERON:0000956!1.83e-13!21;UBERON:0001869!1.83e-13!21;UBERON:0000203!1.83e-13!21;UBERON:0002619!3.12e-11!17;UBERON:0007811!8.75e-11!86;UBERON:0000153!4.13e-10!94;UBERON:0002021!1.10e-08!10;UBERON:0000411!1.10e-08!10;UBERON:0001950!1.10e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-30,54;UBERON:0001017,1.06e-29,73;UBERON:0001016,2.23e-28,75;UBERON:0001049,4.02e-28,52;UBERON:0005068,4.02e-28,52;UBERON:0006241,4.02e-28,52;UBERON:0007135,4.02e-28,52;UBERON:0002020,1.90e-27,34;UBERON:0002346,2.20e-26,64;UBERON:0003075,2.20e-26,64;UBERON:0007284,2.20e-26,64;UBERON:0000955,6.87e-24,47;UBERON:0006238,6.87e-24,47;UBERON:0004121,9.98e-24,95;UBERON:0000924,9.98e-24,95;UBERON:0006601,9.98e-24,95;UBERON:0003528,3.19e-23,29;UBERON:0002791,3.19e-23,29;UBERON:0001893,3.19e-23,29;UBERON:0002616,5.72e-23,46;UBERON:0010371,7.20e-22,73;UBERON:0003056,4.23e-20,49;UBERON:0003080,1.12e-19,40;UBERON:0002780,9.06e-19,39;UBERON:0001890,9.06e-19,39;UBERON:0006240,9.06e-19,39;UBERON:0000956,2.39e-16,21;UBERON:0001869,2.39e-16,21;UBERON:0000203,2.39e-16,21;UBERON:0010314,7.13e-14,92;UBERON:0002619,3.90e-13,17;UBERON:0002021,6.75e-12,10;UBERON:0000411,6.75e-12,10;UBERON:0001950,6.75e-12,10;UBERON:0003076,5.83e-09,12;UBERON:0003057,5.83e-09,12;UBERON:0002420,5.29e-08,8;UBERON:0007245,5.29e-08,8;UBERON:0010009,5.29e-08,8;UBERON:0010011,5.29e-08,8;UBERON:0000454,5.29e-08,8;UBERON:0000025,8.16e-07,114 | |||
|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,11.5658874605455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,8.09265843438391,6.87688273053643,10.1413024560989,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,8.29516898467821,7.96535036156975,9.25429829946081,11.7116903605559,9.49734726091938,8.08439274818697,5.94241920313065,5.51531271966013,31.9336054898227,40.6045735110897,33.4862242498611,9.49581271657396,9.05727671663856,12.5019208933622,20.3803589271008,21.9477417912355,26.1285003698345,15.9099436155781,16.0879999302986,12.4887628702951,0.302904773332736,0.302286240427142,0,0,0,0.539703191637817,0,0,1.82577746171277,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,1.02765491747154,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,53.8716666501247,57.1789509600732,0,0,0,0,33.1037313084658,45.292559679044,23.6230181972185,77.8732954461398,77.9932144857508,30.7526305948149,35.2063540857034,1.01839363850316,0,0,1.68353484709179,0.910843100738926,1.37941262660084,1.26043490863744,0.30140963567143,1.49680298132921,1.2811372028485,0.937017245597288,5.17406741478031,0,2.08016688184601,1.58356011747554,2.19195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,72.1294523574957,20.272208638719,0,0,0,0.232236671860439,0.77320476793256,0.403367049246685,0.22237804384487,0.760902504450237,0,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,1.14075483509418,0.339490171550376,0.938760993154008,2.01007508930179,1.90434912708811,0.585400943573396,0,0.8858587585951,0.318909537314974,0.163863314715738,0,0,0,0,0,0,24.5642402681322,23.676760691625,0,0,0.631016438832513,0,0.646270193198397,0.477937595905104,0.668396022247182,0.283076530788832,0,1.75353514746787,1.18586333383957,28.9189184779626,0.141940085208269,0.712262414669021,0.81443479676788,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,1.03135543248187,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,1.31639216481697,0.304464949114599,0,0,0,0,0.484393280087717,0.542816324353403,0.119372344003136,0,0,26.1449675834819,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0,1.04544148007234,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.583353565032143,0,0.675824501963113,0.469428954583016,0.39061315453185,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,44.6153955667483,52.4770769618182,48.6961186423487,62.0389988260712,72.6187470956881,61.9422995859554,79.6526550273531,78.8062105642386,80.6593487991884,65.2377992807293,0.518936737920883,2.39414924040619,2.39027048055788,1.94485373654635,2.30574478890781,2.02227859295016,2.44471400581777,0.824140228955577,2.24643446714271,1.51618327058278,2.28131369901216,1.88626341386076,2.62196220915671,2.36893063898016,3.21638626151434,2.38146845641537,2.78122382267653,1.73618298417335,1.23625770240992,2.35518272215036,2.40008476669791,1.06485483695602,1.43061713968393,1.74415699958794,2.63506265162926,2.62305284464197,1.46342378298218,1.31534855718921,2.03706170768793,1.68342681497322,3.2031454893527,2.75812550651578,0.818462086339379,2.01417893541756,1.92906610981141,4.74640098082097,2.33931608445408,0.859484216193193,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p1@6430704M03Rik | |||
}} |
Revision as of 05:15, 14 September 2013
Short description: | p1@6430704M03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_6430704M03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000053681, NM_001142965, uc008sxx.2, uc012den.1_5end |
EntrezGene: | 6430704M03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.56e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.56e-19 | 23 |
neuron | 8.93e-14 | 33 |
neuronal stem cell | 8.93e-14 | 33 |
neuroblast | 8.93e-14 | 33 |
electrically signaling cell | 8.93e-14 | 33 |
neural cell | 7.40e-11 | 43 |
ectodermal cell | 2.10e-10 | 44 |
neurectodermal cell | 2.10e-10 | 44 |
electrically responsive cell | 2.50e-10 | 39 |
electrically active cell | 2.50e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.