FFCP PHASE1:Mm9::chr13:12199242..12199251,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20191|HGNC=|MCL_coexpression_id=405|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6|association_with_transcript=-30bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end|description=CAGE_peak_5_at_Ryr2_5end|id=chr13:12199242..12199251,-|ontology_enrichment_celltype=CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000540!1.19e-08!33;CL:0000047!1.19e-08!33;CL:0000031!1.19e-08!33;CL:0000404!1.19e-08!33|ontology_enrichment_celltype_v019_2=CL:0002610,8.52e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.18e-19!34;UBERON:0001049!1.02e-18!52;UBERON:0005068!1.02e-18!52;UBERON:0006241!1.02e-18!52;UBERON:0007135!1.02e-18!52;UBERON:0001017!1.13e-18!73;UBERON:0005743!1.13e-18!73;UBERON:0000073!9.75e-18!75;UBERON:0001016!9.75e-18!75;UBERON:0000955!2.13e-17!50;UBERON:0006238!2.13e-17!50;UBERON:0002616!1.91e-16!49;UBERON:0002791!3.09e-15!29;UBERON:0003528!3.09e-15!29;UBERON:0001893!3.09e-15!29;UBERON:0000033!1.83e-14!63;UBERON:0002346!9.62e-14!71;UBERON:0003075!9.62e-14!71;UBERON:0007284!9.62e-14!71;UBERON:0000025!2.85e-13!114;UBERON:0004111!1.33e-12!122;UBERON:0004121!1.87e-12!102;UBERON:0000924!1.87e-12!102;UBERON:0006601!1.87e-12!102;UBERON:0003080!2.11e-12!40;UBERON:0002780!1.35e-11!39;UBERON:0001890!1.35e-11!39;UBERON:0006240!1.35e-11!39;UBERON:0002021!1.29e-10!10;UBERON:0000411!1.29e-10!10;UBERON:0001950!1.29e-10!10;UBERON:0007100!6.57e-10!18;UBERON:0000948!6.57e-10!18;UBERON:0005498!6.57e-10!18;UBERON:0004140!6.57e-10!18;UBERON:0009881!6.57e-10!18;UBERON:0004141!6.57e-10!18;UBERON:0003084!6.57e-10!18;UBERON:0007005!6.57e-10!18;UBERON:0004139!6.57e-10!18;UBERON:0004291!6.57e-10!18;UBERON:0003056!9.40e-10!49;UBERON:0002619!1.43e-09!17;UBERON:0000956!1.67e-09!21;UBERON:0001869!1.67e-09!21;UBERON:0000203!1.67e-09!21;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12;UBERON:0002420!2.62e-07!8;UBERON:0007245!2.62e-07!8;UBERON:0010009!2.62e-07!8;UBERON:0010011!2.62e-07!8;UBERON:0000454!2.62e-07!8;UBERON:0007811!2.68e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-21,54;UBERON:0010314,7.97e-20,92;UBERON:0001049,5.32e-18,52;UBERON:0005068,5.32e-18,52;UBERON:0006241,5.32e-18,52;UBERON:0007135,5.32e-18,52;UBERON:0001017,2.26e-17,73;UBERON:0001016,9.23e-17,75;UBERON:0002020,1.07e-16,34;UBERON:0002021,1.84e-16,10;UBERON:0000411,1.84e-16,10;UBERON:0001950,1.84e-16,10;UBERON:0000955,6.86e-15,47;UBERON:0006238,6.86e-15,47;UBERON:0000025,8.64e-15,114;UBERON:0003080,8.44e-14,40;UBERON:0002346,1.00e-13,64;UBERON:0003075,1.00e-13,64;UBERON:0007284,1.00e-13,64;UBERON:0004111,2.09e-13,122;UBERON:0002616,2.51e-13,46;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0002780,2.52e-12,39;UBERON:0001890,2.52e-12,39;UBERON:0006240,2.52e-12,39;UBERON:0004121,4.60e-12,95;UBERON:0000924,4.60e-12,95;UBERON:0006601,4.60e-12,95;UBERON:0002619,1.33e-11,17;UBERON:0010371,1.90e-11,73;UBERON:0000956,4.22e-11,21;UBERON:0001869,4.22e-11,21;UBERON:0000203,4.22e-11,21;UBERON:0003056,1.34e-10,49;UBERON:0007100,6.50e-10,18;UBERON:0000948,6.50e-10,18;UBERON:0005498,6.50e-10,18;UBERON:0004140,6.50e-10,18;UBERON:0009881,6.50e-10,18;UBERON:0004141,6.50e-10,18;UBERON:0003084,6.50e-10,18;UBERON:0007005,6.50e-10,18;UBERON:0004139,6.50e-10,18;UBERON:0004291,6.50e-10,18;UBERON:0004684,8.52e-08,3;UBERON:0002275,8.52e-08,3;UBERON:0000483,1.68e-07,174;UBERON:0004535,2.02e-07,23;UBERON:0001009,2.02e-07,23;UBERON:0000119,2.41e-07,176;UBERON:0003103,3.55e-07,43|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.675029691658453,0,1.42825492201902,0.883474163806454,0.244981598429908,0.0958454710182364,0,1.10115880999389,1.53224805702225,1.38245879930619,0.263772575460388,0.548925861614458,0.52091337055676,0.279182999001381,2.25105044012672,1.5279824777681,1.17851434189467,1.85083185038834,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,2.93225389538837,0,0,0,0,2.09706895166752,3.20250421973039,0.502617408451458,1.21677024134594,2.30143911597297,1.87009240103604,1.29793010454206,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,1.18372367792605,0.983821158737019,0.617068451549513,1.16266972375204,0.268273401399619,2.91913355917924,1.81015834904829,1.14917224855367,2.02672023864639,1.60819986167866,1.97595103761946,1.20785776884335,2.52347938276953,0.411618449517138,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0.215423397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| ||
|EntrezGene=20191 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6 | |||
|association_with_transcript=-30bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end | |||
|description=CAGE_peak_5_at_Ryr2_5end | |||
|id=chr13:12199242..12199251,- | |||
|ontology_enrichment_celltype=CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000540!1.19e-08!33;CL:0000047!1.19e-08!33;CL:0000031!1.19e-08!33;CL:0000404!1.19e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.52e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.18e-19!34;UBERON:0001049!1.02e-18!52;UBERON:0005068!1.02e-18!52;UBERON:0006241!1.02e-18!52;UBERON:0007135!1.02e-18!52;UBERON:0001017!1.13e-18!73;UBERON:0005743!1.13e-18!73;UBERON:0000073!9.75e-18!75;UBERON:0001016!9.75e-18!75;UBERON:0000955!2.13e-17!50;UBERON:0006238!2.13e-17!50;UBERON:0002616!1.91e-16!49;UBERON:0002791!3.09e-15!29;UBERON:0003528!3.09e-15!29;UBERON:0001893!3.09e-15!29;UBERON:0000033!1.83e-14!63;UBERON:0002346!9.62e-14!71;UBERON:0003075!9.62e-14!71;UBERON:0007284!9.62e-14!71;UBERON:0000025!2.85e-13!114;UBERON:0004111!1.33e-12!122;UBERON:0004121!1.87e-12!102;UBERON:0000924!1.87e-12!102;UBERON:0006601!1.87e-12!102;UBERON:0003080!2.11e-12!40;UBERON:0002780!1.35e-11!39;UBERON:0001890!1.35e-11!39;UBERON:0006240!1.35e-11!39;UBERON:0002021!1.29e-10!10;UBERON:0000411!1.29e-10!10;UBERON:0001950!1.29e-10!10;UBERON:0007100!6.57e-10!18;UBERON:0000948!6.57e-10!18;UBERON:0005498!6.57e-10!18;UBERON:0004140!6.57e-10!18;UBERON:0009881!6.57e-10!18;UBERON:0004141!6.57e-10!18;UBERON:0003084!6.57e-10!18;UBERON:0007005!6.57e-10!18;UBERON:0004139!6.57e-10!18;UBERON:0004291!6.57e-10!18;UBERON:0003056!9.40e-10!49;UBERON:0002619!1.43e-09!17;UBERON:0000956!1.67e-09!21;UBERON:0001869!1.67e-09!21;UBERON:0000203!1.67e-09!21;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12;UBERON:0002420!2.62e-07!8;UBERON:0007245!2.62e-07!8;UBERON:0010009!2.62e-07!8;UBERON:0010011!2.62e-07!8;UBERON:0000454!2.62e-07!8;UBERON:0007811!2.68e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-21,54;UBERON:0010314,7.97e-20,92;UBERON:0001049,5.32e-18,52;UBERON:0005068,5.32e-18,52;UBERON:0006241,5.32e-18,52;UBERON:0007135,5.32e-18,52;UBERON:0001017,2.26e-17,73;UBERON:0001016,9.23e-17,75;UBERON:0002020,1.07e-16,34;UBERON:0002021,1.84e-16,10;UBERON:0000411,1.84e-16,10;UBERON:0001950,1.84e-16,10;UBERON:0000955,6.86e-15,47;UBERON:0006238,6.86e-15,47;UBERON:0000025,8.64e-15,114;UBERON:0003080,8.44e-14,40;UBERON:0002346,1.00e-13,64;UBERON:0003075,1.00e-13,64;UBERON:0007284,1.00e-13,64;UBERON:0004111,2.09e-13,122;UBERON:0002616,2.51e-13,46;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0002780,2.52e-12,39;UBERON:0001890,2.52e-12,39;UBERON:0006240,2.52e-12,39;UBERON:0004121,4.60e-12,95;UBERON:0000924,4.60e-12,95;UBERON:0006601,4.60e-12,95;UBERON:0002619,1.33e-11,17;UBERON:0010371,1.90e-11,73;UBERON:0000956,4.22e-11,21;UBERON:0001869,4.22e-11,21;UBERON:0000203,4.22e-11,21;UBERON:0003056,1.34e-10,49;UBERON:0007100,6.50e-10,18;UBERON:0000948,6.50e-10,18;UBERON:0005498,6.50e-10,18;UBERON:0004140,6.50e-10,18;UBERON:0009881,6.50e-10,18;UBERON:0004141,6.50e-10,18;UBERON:0003084,6.50e-10,18;UBERON:0007005,6.50e-10,18;UBERON:0004139,6.50e-10,18;UBERON:0004291,6.50e-10,18;UBERON:0004684,8.52e-08,3;UBERON:0002275,8.52e-08,3;UBERON:0000483,1.68e-07,174;UBERON:0004535,2.02e-07,23;UBERON:0001009,2.02e-07,23;UBERON:0000119,2.41e-07,176;UBERON:0003103,3.55e-07,43 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.675029691658453,0,1.42825492201902,0.883474163806454,0.244981598429908,0.0958454710182364,0,1.10115880999389,1.53224805702225,1.38245879930619,0.263772575460388,0.548925861614458,0.52091337055676,0.279182999001381,2.25105044012672,1.5279824777681,1.17851434189467,1.85083185038834,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,2.93225389538837,0,0,0,0,2.09706895166752,3.20250421973039,0.502617408451458,1.21677024134594,2.30143911597297,1.87009240103604,1.29793010454206,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,1.18372367792605,0.983821158737019,0.617068451549513,1.16266972375204,0.268273401399619,2.91913355917924,1.81015834904829,1.14917224855367,2.02672023864639,1.60819986167866,1.97595103761946,1.20785776884335,2.52347938276953,0.411618449517138,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.17717711348349,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,2.86447756719698,2.57779773515531,3.42541259885321,0.755393897389701,2.70009000092722,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.192075457214608,0,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Ryr2 | |||
}} |
Revision as of 00:00, 13 September 2013
Short description: | p5@Ryr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ryr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | -30bp_to_ENSMUST00000021750, ENSMUST00000170156, NM_023868, uc007pld.1, uc007plf.1, uc011ywc.1_5end |
EntrezGene: | Ryr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.52e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.