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FFCP PHASE1:Mm9::chr13:46597418..46597476,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67252|HGNC=|MCL_coexpression_id=413|UniProt=D3YTR7|association_with_transcript=-17bp_to_ENSMUST00000119341_5end|description=CAGE_peak_2_at_Cap2_5end|id=chr13:46597418..46597476,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!9.59e-11!333;UBERON:0000033!1.85e-09!63;UBERON:0000955!1.41e-08!50;UBERON:0006238!1.41e-08!50;UBERON:0002616!3.90e-08!49;UBERON:0002021!5.38e-08!10;UBERON:0000411!5.38e-08!10;UBERON:0001950!5.38e-08!10;UBERON:0002791!7.11e-08!29;UBERON:0003528!7.11e-08!29;UBERON:0001893!7.11e-08!29;UBERON:0003056!1.11e-07!49;UBERON:0000956!2.24e-07!21;UBERON:0001869!2.24e-07!21;UBERON:0000203!2.24e-07!21;UBERON:0007100!2.29e-07!18;UBERON:0000948!2.29e-07!18;UBERON:0005498!2.29e-07!18;UBERON:0004140!2.29e-07!18;UBERON:0009881!2.29e-07!18;UBERON:0004141!2.29e-07!18;UBERON:0003084!2.29e-07!18;UBERON:0007005!2.29e-07!18;UBERON:0004139!2.29e-07!18;UBERON:0004291!2.29e-07!18;UBERON:0002020!4.40e-07!34;UBERON:0001049!4.47e-07!52;UBERON:0005068!4.47e-07!52;UBERON:0006241!4.47e-07!52;UBERON:0007135!4.47e-07!52;UBERON:0002619!6.14e-07!17;UBERON:0002346!7.57e-07!71;UBERON:0003075!7.57e-07!71;UBERON:0007284!7.57e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.14e-12,92;UBERON:0002021,3.59e-08,10;UBERON:0000411,3.59e-08,10;UBERON:0001950,3.59e-08,10;UBERON:0002346,6.08e-08,64;UBERON:0003075,6.08e-08,64;UBERON:0007284,6.08e-08,64;UBERON:0003528,8.27e-08,29;UBERON:0002791,8.27e-08,29;UBERON:0001893,8.27e-08,29;UBERON:0010371,1.72e-07,73;UBERON:0000073,2.00e-07,54;UBERON:0003056,2.56e-07,49;UBERON:0000955,2.67e-07,47;UBERON:0006238,2.67e-07,47;UBERON:0000956,2.86e-07,21;UBERON:0001869,2.86e-07,21;UBERON:0000203,2.86e-07,21;UBERON:0007100,2.93e-07,18;UBERON:0000948,2.93e-07,18;UBERON:0005498,2.93e-07,18;UBERON:0004140,2.93e-07,18;UBERON:0009881,2.93e-07,18;UBERON:0004141,2.93e-07,18;UBERON:0003084,2.93e-07,18;UBERON:0007005,2.93e-07,18;UBERON:0004139,2.93e-07,18;UBERON:0004291,2.93e-07,18;UBERON:0002020,5.02e-07,34;UBERON:0002616,7.10e-07,46;UBERON:0001049,7.82e-07,52;UBERON:0005068,7.82e-07,52;UBERON:0006241,7.82e-07,52;UBERON:0007135,7.82e-07,52;UBERON:0002619,8.38e-07,17|phase1_expression=1.76163731815273,1.04692622291808,0.454999239389536,0.30246421130683,0,4.53274034162102,5.13947809310157,0.258246646883153,0.422366166455,0.70219357896598,0.513653904676515,0.398860794976682,0.684802919724823,1.13646523144697,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,7.22867966284093,0,0,2.23989391910769,1.83527424853736,0,0,3.01659725760245,0.190023419456374,0.504060259519861,1.55211357458713,0,0,0,4.91047753577167,3.15845826181135,4.49172583777212,0.418531630736908,0,0,0,0,0,0.377690453926732,0.405507724878058,0.734187008646726,0,3.05235218932625,5.4921545683618,7.58276606389705,1.67983705950435,2.87505128729943,0,0.725362142011344,0,1.02903774414379,0.85960031981627,5.15672092277442,1.82084814773638,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,1.53687322128622,3.52544681848824,5.13022565660425,4.20649922702764,3.42781181284564,2.42955395046775,2.69479758272899,3.1629005436018,0.919218786610021,7.70811166995721,24.3882815742709,20.4296689230804,1.45074916503213,3.38504281328916,1.04182674111352,13.4007839520663,15.1945904708554,19.0997809721013,3.53554302568401,3.13217697758026,1.1183966749518,0.227178579999552,0,1.15945795480671,0,0,0,0,0,7.3031098468511,0,0,0,1.54927761754349,0,0,0,0.216491041011214,0.506719730950197,1.01104889002957,1.7127581957859,0.776813650941515,1.1875371125186,2.25530924795977,1.21786191324856,1.15307748628029,1.05505848386836,1.88141931417128,2.01066546127481,0,3.32578520915797,6.19227386364912,27.5003644910596,12.8088080707028,6.30337829075789,9.31958806090611,26.6430525280508,21.3635640949724,2.04365644166873,0.239630249011841,0,0,35.0510096207285,97.4476284003674,4.39790232395025,77.6994711259476,81.3175154310451,43.6354893575076,48.3478963941918,3.66621709861139,6.34475550111474,1.0108910337347,4.8401626853889,4.03373373184381,6.89706313300419,8.46292010085141,6.0281927134286,5.91917542616552,5.38077625196369,6.37171727006156,8.53721123438752,1.94011193639558,5.8622884852024,6.862093842394,11.3981780862339,5.56094498451196,9.4028084960985,5.35033554660653,2.7864797354589,0,0,0,49.503059635985,36.3515392970699,43.7550809350266,46.4019681747012,53.7166352670412,55.9989619781183,44.4139834473279,46.4112984421341,38.4157976387988,43.1146806773319,17.4017511923841,20.5104088151015,18.1287984407412,19.7595103761946,15.8363574137239,94.209896956729,3.08713837137853,1.65209391491899,0.528901133327089,4.69234151177515,4.64473343720877,6.05677068213839,3.42861991859682,4.44756087689741,4.75564065281398,1.89811624617805,2.63518327558417,2.76468729680296,3.38226002469956,4.28920991662064,3.59527763461689,4.10662294761919,1.99141273254367,3.41402221715547,3.31320686568214,5.63538678365402,2.240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|EntrezGene=67252
|HGNC=
|MCL_coexpression_id=413
|UniProt=D3YTR7
|association_with_transcript=-17bp_to_ENSMUST00000119341_5end
|description=CAGE_peak_2_at_Cap2_5end
|id=chr13:46597418..46597476,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!9.59e-11!333;UBERON:0000033!1.85e-09!63;UBERON:0000955!1.41e-08!50;UBERON:0006238!1.41e-08!50;UBERON:0002616!3.90e-08!49;UBERON:0002021!5.38e-08!10;UBERON:0000411!5.38e-08!10;UBERON:0001950!5.38e-08!10;UBERON:0002791!7.11e-08!29;UBERON:0003528!7.11e-08!29;UBERON:0001893!7.11e-08!29;UBERON:0003056!1.11e-07!49;UBERON:0000956!2.24e-07!21;UBERON:0001869!2.24e-07!21;UBERON:0000203!2.24e-07!21;UBERON:0007100!2.29e-07!18;UBERON:0000948!2.29e-07!18;UBERON:0005498!2.29e-07!18;UBERON:0004140!2.29e-07!18;UBERON:0009881!2.29e-07!18;UBERON:0004141!2.29e-07!18;UBERON:0003084!2.29e-07!18;UBERON:0007005!2.29e-07!18;UBERON:0004139!2.29e-07!18;UBERON:0004291!2.29e-07!18;UBERON:0002020!4.40e-07!34;UBERON:0001049!4.47e-07!52;UBERON:0005068!4.47e-07!52;UBERON:0006241!4.47e-07!52;UBERON:0007135!4.47e-07!52;UBERON:0002619!6.14e-07!17;UBERON:0002346!7.57e-07!71;UBERON:0003075!7.57e-07!71;UBERON:0007284!7.57e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.14e-12,92;UBERON:0002021,3.59e-08,10;UBERON:0000411,3.59e-08,10;UBERON:0001950,3.59e-08,10;UBERON:0002346,6.08e-08,64;UBERON:0003075,6.08e-08,64;UBERON:0007284,6.08e-08,64;UBERON:0003528,8.27e-08,29;UBERON:0002791,8.27e-08,29;UBERON:0001893,8.27e-08,29;UBERON:0010371,1.72e-07,73;UBERON:0000073,2.00e-07,54;UBERON:0003056,2.56e-07,49;UBERON:0000955,2.67e-07,47;UBERON:0006238,2.67e-07,47;UBERON:0000956,2.86e-07,21;UBERON:0001869,2.86e-07,21;UBERON:0000203,2.86e-07,21;UBERON:0007100,2.93e-07,18;UBERON:0000948,2.93e-07,18;UBERON:0005498,2.93e-07,18;UBERON:0004140,2.93e-07,18;UBERON:0009881,2.93e-07,18;UBERON:0004141,2.93e-07,18;UBERON:0003084,2.93e-07,18;UBERON:0007005,2.93e-07,18;UBERON:0004139,2.93e-07,18;UBERON:0004291,2.93e-07,18;UBERON:0002020,5.02e-07,34;UBERON:0002616,7.10e-07,46;UBERON:0001049,7.82e-07,52;UBERON:0005068,7.82e-07,52;UBERON:0006241,7.82e-07,52;UBERON:0007135,7.82e-07,52;UBERON:0002619,8.38e-07,17
|phase1_expression=1.76163731815273,1.04692622291808,0.454999239389536,0.30246421130683,0,4.53274034162102,5.13947809310157,0.258246646883153,0.422366166455,0.70219357896598,0.513653904676515,0.398860794976682,0.684802919724823,1.13646523144697,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,7.22867966284093,0,0,2.23989391910769,1.83527424853736,0,0,3.01659725760245,0.190023419456374,0.504060259519861,1.55211357458713,0,0,0,4.91047753577167,3.15845826181135,4.49172583777212,0.418531630736908,0,0,0,0,0,0.377690453926732,0.405507724878058,0.734187008646726,0,3.05235218932625,5.4921545683618,7.58276606389705,1.67983705950435,2.87505128729943,0,0.725362142011344,0,1.02903774414379,0.85960031981627,5.15672092277442,1.82084814773638,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,1.53687322128622,3.52544681848824,5.13022565660425,4.20649922702764,3.42781181284564,2.42955395046775,2.69479758272899,3.1629005436018,0.919218786610021,7.70811166995721,24.3882815742709,20.4296689230804,1.45074916503213,3.38504281328916,1.04182674111352,13.4007839520663,15.1945904708554,19.0997809721013,3.53554302568401,3.13217697758026,1.1183966749518,0.227178579999552,0,1.15945795480671,0,0,0,0,0,7.3031098468511,0,0,0,1.54927761754349,0,0,0,0.216491041011214,0.506719730950197,1.01104889002957,1.7127581957859,0.776813650941515,1.1875371125186,2.25530924795977,1.21786191324856,1.15307748628029,1.05505848386836,1.88141931417128,2.01066546127481,0,3.32578520915797,6.19227386364912,27.5003644910596,12.8088080707028,6.30337829075789,9.31958806090611,26.6430525280508,21.3635640949724,2.04365644166873,0.239630249011841,0,0,35.0510096207285,97.4476284003674,4.39790232395025,77.6994711259476,81.3175154310451,43.6354893575076,48.3478963941918,3.66621709861139,6.34475550111474,1.0108910337347,4.8401626853889,4.03373373184381,6.89706313300419,8.46292010085141,6.0281927134286,5.91917542616552,5.38077625196369,6.37171727006156,8.53721123438752,1.94011193639558,5.8622884852024,6.862093842394,11.3981780862339,5.56094498451196,9.4028084960985,5.35033554660653,2.7864797354589,0,0,0,49.503059635985,36.3515392970699,43.7550809350266,46.4019681747012,53.7166352670412,55.9989619781183,44.4139834473279,46.4112984421341,38.4157976387988,43.1146806773319,17.4017511923841,20.5104088151015,18.1287984407412,19.7595103761946,15.8363574137239,94.209896956729,3.08713837137853,1.65209391491899,0.528901133327089,4.69234151177515,4.64473343720877,6.05677068213839,3.42861991859682,4.44756087689741,4.75564065281398,1.89811624617805,2.63518327558417,2.76468729680296,3.38226002469956,4.28920991662064,3.59527763461689,4.10662294761919,1.99141273254367,3.41402221715547,3.31320686568214,5.63538678365402,2.24016460629846,2.52138233317913,1.26244475802573,1.39120381673366,0.442830443938806,0.470996183524124,0.246794327843601,0,3.17005700860579,2.55526693647164,0.674586337154561,1.82574109249653,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.505157755894224,0.358794827043824,0,1.84753190166605,7.39016505904891,6.19266910479698,5.60158783058121,4.69380496577004,4.18765643604539,4.04674189506223,3.31727201358258,3.94087860265477,5.53661724121937,5.58091690301205,1.80249646187312,2.76295970985433,0.289298117163023,0,0,2.45882136509518,0.551873492609465,24.72479085812,14.0654023910644,0,40.3953483526997,1.57754109708128,3.12350995437311,3.01592756825919,1.43381278771531,1.11399337041197,1.41538265394416,0.404810701674894,2.92255857911312,0.790575555893047,38.237236654195,6.24536374916382,2.67098405500883,4.0721739838394,13.6925202067204,0,1.21390318077491,0.604647113929502,0.565815239267694,0.885905678642318,2.45948118355142,0.516856586336442,0.727067458955011,2.13898427030833,3.16036757935816,0,2.06271086496374,0.340439605753788,2.52085531643834,1.68166288917581,1.71469628025274,1.24138163549592,1.07021290561242,0.658196082408484,0.913394847343798,0.469343416127421,0.42366414172764,2.20528398054962,6.43056386471772,6.78150592122803,5.60910201831849,2.86493625607528,2.79039529566604,4.37221254944776,21.1384844291981,1.19609616558497,1.23832120777933,0.740778109478847,0.188368457004691,0.546776910884101,0.686334519619568,0.679913719975421,0,0.414599921413271,3.81868247206045,3.00519193902079,5.08298667817122,4.64422965533745,3.13632444021703,5.24070152990826,7.28267470478032,5.37247462214684,2.6175594198403,3.88844919875379,0.621339313086926,4.50954350947352,2.8408143748356,2.64733584731356,2.33341426012857,2.45403664607689,1.35164900392623,1.17357238645754,2.0832701575032,1.15345278868282,0.483168241652012,6.33666013767304,1.89606672376907,2.63542779877213,0.924398614483445,1.42912905275575,1.61124026100733,0.79472541912506,2.16351809135944,1.9199638532695,2.1202954489111,1.5241361331,1.71404514732629,1.26695244961678,0.962118416403295,1.75315353272353,19.272082607293,0,0,0.167884616364078,16.0347363046718,5.81815673898664,9.34073283763052,4.28736758158132,2.00628841614145,66.0759655861968,69.5091107125837,76.1951032874397,58.6019351791975,81.5248198527064,85.3595104050362,84.3778125289757,77.9055681577901,72.0496430284885,79.2173276980285,4.8780053364563,6.78342284781753,7.5122786531819,12.398442570483,9.01336599300324,8.45680138870065,17.5574914963276,16.2767695218726,15.0832028508153,19.96307972934,20.2783439912192,18.6740077972215,15.91905626988,17.9910678257683,19.2983175690861,20.4806287251722,16.4555742841695,20.6412865896164,17.3076078337389,21.491042339622,14.057639347802,20.0547660960051,15.9752247264705,22.0926553281139,17.9748916593281,17.1767654020103,18.8415812058956,18.6779495120868,15.2100607507365,22.4456908663095,17.0834426098811,18.5188426866059,15.9600106836179,17.6627998952001,12.9247429357365,11.4912865851455,20.5859815431959,11.1732948105115,23.7197531765366,15.6619907574856,22.9549157264217
|short_description=p2@Cap2
}}

Revision as of 00:38, 13 September 2013

Short description:p2@Cap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cap2_5end
Coexpression cluster:MCL_coexpression_mm9:413
Association with transcript: -17bp_to_ENSMUST00000119341_5end
EntrezGene:Cap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F527.50
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B226.64
cerebellum, neonate N30.CNhs11135.1395-42I221.36
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.05
corpus striatum, adult.CNhs10487.19-21D897.45
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D577.70
cortex, neonate N30.CNhs11107.1392-42F281.32
diencephalon, adult.CNhs10482.20-12F243.64
diencephalon, neonate N30.CNhs11201.1388-42B248.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C65.92
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G86.37
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E949.50
heart, embryo E12.CNhs11015.353-12F536.35
heart, embryo E13.CNhs11013.376-3I943.76
heart, embryo E14.CNhs10597.403-26D446.40
heart, embryo E15.CNhs11017.431-16C853.72
heart, embryo E16.CNhs11021.457-17C656.00
heart, embryo E17.CNhs11025.479-18E544.41
heart, embryo E18.CNhs11030.1283-20G346.41
heart, neonate N00.CNhs11213.639-21E338.42
heart, neonate N03.CNhs11221.1349-25I243.11
heart, neonate N10.CNhs11118.749-24G117.40
heart, neonate N16.CNhs11209.782-15G120.51
heart, neonate N20.CNhs11127.821-26I618.13
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D215.84
hippocampus, adult.CNhs10478.13-16E894.21
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C224.72
medulla oblongata, neonate N30.CNhs11200.1396-42A314.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C240.40
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I938.24
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G613.69
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H35.61
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C921.14
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A95.37
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B419.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E416.03
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A166.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A269.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A376.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A481.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A585.36
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A684.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A777.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A872.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A979.22
whole body, embryo E11.CNhs11014.324-5I84.88
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.66
whole body, embryo E17.5.CNhs10513.490-9F912.92
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B320.59
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C623.72
whole body, neonate N06.CNhs10515.692-21D115.66
whole body, neonate N10.CNhs10518.761-6B422.95





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.14e-1292
occipital lobe3.59e-0810
visual cortex3.59e-0810
neocortex3.59e-0810
neurectoderm6.08e-0864
neural plate6.08e-0864
presumptive neural plate6.08e-0864
brain grey matter8.27e-0829
regional part of telencephalon8.27e-0829
telencephalon8.27e-0829
ecto-epithelium1.72e-0773
regional part of nervous system2.00e-0754
pre-chordal neural plate2.56e-0749
brain2.67e-0747
future brain2.67e-0747
cerebral cortex2.86e-0721
cerebral hemisphere2.86e-0721
pallium2.86e-0721
primary circulatory organ2.93e-0718
heart2.93e-0718
primitive heart tube2.93e-0718
primary heart field2.93e-0718
anterior lateral plate mesoderm2.93e-0718
heart tube2.93e-0718
heart primordium2.93e-0718
cardiac mesoderm2.93e-0718
cardiogenic plate2.93e-0718
heart rudiment2.93e-0718
gray matter5.02e-0734
regional part of brain7.10e-0746
neural tube7.82e-0752
neural rod7.82e-0752
future spinal cord7.82e-0752
neural keel7.82e-0752
regional part of cerebral cortex8.38e-0717







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