FFCP PHASE1:Mm9::chr7:87377638..87377728,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23991|HGNC=|MCL_coexpression_id=0|UniProt=Q9Z0F4|association_with_transcript=0bp_to_ENSMUST00000065163_5end|description=CAGE_peak_2_at_Cib1_5end|id=chr7:87377638..87377728,-|ontology_enrichment_celltype=CL:0000117!7.53e-12!23;CL:0000337!7.53e-12!23;CL:0000221!3.31e-07!44;CL:0000133!3.31e-07!44;CL:0002319!5.97e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,7.17e-14,23;CL:0000337,7.17e-14,23;CL:0000221,1.51e-09,44;CL:0000133,1.51e-09,44;CL:0002319,3.15e-09,43;CL:0000540,1.01e-07,33;CL:0000047,1.01e-07,33;CL:0000031,1.01e-07,33;CL:0000404,1.01e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.69e-21!63;UBERON:0001049!5.54e-21!52;UBERON:0005068!5.54e-21!52;UBERON:0006241!5.54e-21!52;UBERON:0007135!5.54e-21!52;UBERON:0002616!8.50e-21!49;UBERON:0000955!1.52e-20!50;UBERON:0006238!1.52e-20!50;UBERON:0001017!3.89e-18!73;UBERON:0005743!3.89e-18!73;UBERON:0000073!6.47e-17!75;UBERON:0001016!6.47e-17!75;UBERON:0003056!1.57e-16!49;UBERON:0002346!2.67e-16!71;UBERON:0003075!2.67e-16!71;UBERON:0007284!2.67e-16!71;UBERON:0003080!1.02e-15!40;UBERON:0002780!1.68e-15!39;UBERON:0001890!1.68e-15!39;UBERON:0006240!1.68e-15!39;UBERON:0002020!1.63e-13!34;UBERON:0004121!1.01e-12!102;UBERON:0000924!1.01e-12!102;UBERON:0006601!1.01e-12!102;UBERON:0002791!3.15e-12!29;UBERON:0003528!3.15e-12!29;UBERON:0001893!3.15e-12!29;UBERON:0007811!1.36e-11!86;UBERON:0000153!4.26e-11!94;UBERON:0000956!1.87e-08!21;UBERON:0001869!1.87e-08!21;UBERON:0000203!1.87e-08!21;UBERON:0000025!2.30e-07!114;UBERON:0004111!9.72e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-26,54;UBERON:0001049,5.72e-25,52;UBERON:0005068,5.72e-25,52;UBERON:0006241,5.72e-25,52;UBERON:0007135,5.72e-25,52;UBERON:0002346,3.96e-23,64;UBERON:0003075,3.96e-23,64;UBERON:0007284,3.96e-23,64;UBERON:0002616,1.49e-22,46;UBERON:0001017,1.90e-22,73;UBERON:0000955,1.28e-21,47;UBERON:0006238,1.28e-21,47;UBERON:0001016,4.03e-21,75;UBERON:0010371,4.41e-20,73;UBERON:0003056,3.91e-19,49;UBERON:0003080,1.18e-18,40;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002780,2.13e-18,39;UBERON:0001890,2.13e-18,39;UBERON:0006240,2.13e-18,39;UBERON:0010314,6.81e-18,92;UBERON:0002020,2.23e-16,34;UBERON:0003528,7.61e-15,29;UBERON:0002791,7.61e-15,29;UBERON:0001893,7.61e-15,29;UBERON:0000956,2.64e-10,21;UBERON:0001869,2.64e-10,21;UBERON:0000203,2.64e-10,21;UBERON:0000025,5.29e-08,114;UBERON:0004111,1.21e-07,122;UBERON:0002619,1.36e-07,17;UBERON:0003076,6.92e-07,12;UBERON:0003057,6.92e-07,12|phase1_expression=6.24580503708696,2.44282785347553,3.63999391511629,1.51232105653415,1.50268718983904,1.84667199103079,0.934450562382103,0.258246646883153,0,0,0.171217968225505,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,25.598030335472,0.297872853602656,0.261199789138935,1.11994695955385,1.60586496747019,4.01962374880514,3.01533397311352,3.23206849028834,0.380046838912748,1.00812051903972,1.55211357458713,0,0.61506478758457,0,1.73310971850765,1.16364251750945,2.24586291888606,0.837063261473815,0.7813353445238,0,1.76469446409304,1.36609096991689,2.91306211818692,0.503587271902309,0.506884656097573,0.367093504323363,14.0830441982647,2.39827672018491,4.17403747195497,9.72149495371417,1.81982348112971,0,0,0,0,0.514518872071894,0,0.515672092277442,5.86717736492834,2.64495489636016,6.33831403506179,2.71075625655306,2.66788438833342,0.449949858640699,0,0,2.69640099466564,1.92109152660777,6.0139975138917,4.18518408828241,6.09942387919008,2.85650984403804,1.54607978666129,2.9397791811589,2.39613677545591,2.75765635983006,3.30347642998166,7.66124028511126,4.45458946443106,3.03338461779446,4.94033275453012,5.73004707612436,10.6089539620525,3.37657566019008,4.27835093775068,3.24091444021034,1.85083185038834,1.4911955666024,0.37863096666592,0.302286240427142,0,1.72084775396277,0.679971333707751,1.07940638327563,0,0.448026887097336,3.5111105032938,0.170430322578058,0.259786004602869,0.35333957451034,2.11265129665021,0,0,0,0.216491041011214,0.760079596425296,0,3.4255163915718,0.258937883647172,0.148442139064825,0.693941307064543,0.913396434936424,0.461230994512117,0.60289056221049,0.352766121407114,0.376999773989026,0.247194967734374,0.289198713839823,0,0.970601099684455,0.883366073841574,0.969750506270444,0,3.22058876712702,3.14170060220183,1.02182822083437,0.359445373517761,0.599902730993408,0.381210681219194,1.79748767285787,4.57500602818627,1.25654352112864,5.38855392596057,3.83573185995496,4.77912502486988,3.40706652442291,1.62942982160506,1.24406970610093,5.30717792710717,0.841767423545896,1.43132487258974,2.98872735763515,1.0803727788321,2.41127708537144,1.08858398642125,1.40925092313335,1.78033276663485,1.55222022443409,2.37124792226126,0.945530400839096,1.40760899331159,0.657587197282725,0.834141747676794,0.348252166522167,1.85203922767149,1.59227413454795,1.40442637462647,1.28673953557358,0.852490498186778,1.03562886267751,0.46905211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| ||
|EntrezGene=23991 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9Z0F4 | |||
|association_with_transcript=0bp_to_ENSMUST00000065163_5end | |||
|description=CAGE_peak_2_at_Cib1_5end | |||
|id=chr7:87377638..87377728,- | |||
|ontology_enrichment_celltype=CL:0000117!7.53e-12!23;CL:0000337!7.53e-12!23;CL:0000221!3.31e-07!44;CL:0000133!3.31e-07!44;CL:0002319!5.97e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.17e-14,23;CL:0000337,7.17e-14,23;CL:0000221,1.51e-09,44;CL:0000133,1.51e-09,44;CL:0002319,3.15e-09,43;CL:0000540,1.01e-07,33;CL:0000047,1.01e-07,33;CL:0000031,1.01e-07,33;CL:0000404,1.01e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.69e-21!63;UBERON:0001049!5.54e-21!52;UBERON:0005068!5.54e-21!52;UBERON:0006241!5.54e-21!52;UBERON:0007135!5.54e-21!52;UBERON:0002616!8.50e-21!49;UBERON:0000955!1.52e-20!50;UBERON:0006238!1.52e-20!50;UBERON:0001017!3.89e-18!73;UBERON:0005743!3.89e-18!73;UBERON:0000073!6.47e-17!75;UBERON:0001016!6.47e-17!75;UBERON:0003056!1.57e-16!49;UBERON:0002346!2.67e-16!71;UBERON:0003075!2.67e-16!71;UBERON:0007284!2.67e-16!71;UBERON:0003080!1.02e-15!40;UBERON:0002780!1.68e-15!39;UBERON:0001890!1.68e-15!39;UBERON:0006240!1.68e-15!39;UBERON:0002020!1.63e-13!34;UBERON:0004121!1.01e-12!102;UBERON:0000924!1.01e-12!102;UBERON:0006601!1.01e-12!102;UBERON:0002791!3.15e-12!29;UBERON:0003528!3.15e-12!29;UBERON:0001893!3.15e-12!29;UBERON:0007811!1.36e-11!86;UBERON:0000153!4.26e-11!94;UBERON:0000956!1.87e-08!21;UBERON:0001869!1.87e-08!21;UBERON:0000203!1.87e-08!21;UBERON:0000025!2.30e-07!114;UBERON:0004111!9.72e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-26,54;UBERON:0001049,5.72e-25,52;UBERON:0005068,5.72e-25,52;UBERON:0006241,5.72e-25,52;UBERON:0007135,5.72e-25,52;UBERON:0002346,3.96e-23,64;UBERON:0003075,3.96e-23,64;UBERON:0007284,3.96e-23,64;UBERON:0002616,1.49e-22,46;UBERON:0001017,1.90e-22,73;UBERON:0000955,1.28e-21,47;UBERON:0006238,1.28e-21,47;UBERON:0001016,4.03e-21,75;UBERON:0010371,4.41e-20,73;UBERON:0003056,3.91e-19,49;UBERON:0003080,1.18e-18,40;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002780,2.13e-18,39;UBERON:0001890,2.13e-18,39;UBERON:0006240,2.13e-18,39;UBERON:0010314,6.81e-18,92;UBERON:0002020,2.23e-16,34;UBERON:0003528,7.61e-15,29;UBERON:0002791,7.61e-15,29;UBERON:0001893,7.61e-15,29;UBERON:0000956,2.64e-10,21;UBERON:0001869,2.64e-10,21;UBERON:0000203,2.64e-10,21;UBERON:0000025,5.29e-08,114;UBERON:0004111,1.21e-07,122;UBERON:0002619,1.36e-07,17;UBERON:0003076,6.92e-07,12;UBERON:0003057,6.92e-07,12 | |||
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| |||
|short_description=p2@Cib1 | |||
}} |
Revision as of 14:18, 14 September 2013
Short description: | p2@Cib1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cib1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000065163_5end |
EntrezGene: | Cib1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.17e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.17e-14 | 23 |
ectodermal cell | 1.51e-09 | 44 |
neurectodermal cell | 1.51e-09 | 44 |
neural cell | 3.15e-09 | 43 |
neuron | 1.01e-07 | 33 |
neuronal stem cell | 1.01e-07 | 33 |
neuroblast | 1.01e-07 | 33 |
electrically signaling cell | 1.01e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.