Personal tools

FFCP PHASE1:Mm9::chr15:12251289..12251302,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=66629|HGNC=|MCL_coexpression_id=7|UniProt=Q9CRA5,Q05BZ0|association_with_transcript=38bp_to_NM_025673,uc007vhn.1,uc007vho.1,uc007vhp.1,uc011zrm.1_5end|description=CAGE_peak_4_at_Golph3_5end|id=chr15:12251289..12251302,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.64e-07,17|phase1_expression=1.76163731815273,0.348975407639361,3.18499467572675,1.51232105653415,2.00358291978539,0.16787927191189,0.934450562382103,1.93684985162364,16.472280491745,23.4064526321993,0.34243593645101,0.478632953972018,1.36960583944965,1.04904482902797,0,0.202475267389826,0,0,0.411343300817216,0,0.765389611359628,0.397163804803541,0.522399578277871,0.47997726838022,0.45881856213434,0.57423196411502,0.86152399231815,1.07735616342945,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.332469290716985,0.612508068787107,2.92972141515835,0,0,4.1176204162171,2.04913645487534,0.485510353031154,1.00717454380462,0.405507724878058,1.46837401729345,2.34717403304412,1.30815093828268,2.19686182734472,2.13872888981712,0.419959264876088,0,0.671130424230945,2.17608642603403,2.68875039313971,0.771778308107841,0.573066879877513,1.03134418455488,0.606949382578793,0.528990979272033,1.26766280701236,1.69422266034566,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.622137673850866,0.540023753326763,0.841299845405528,1.14260393761521,1.10434270475807,0.489963196859816,0.575072826109418,0,0,0.383062014255563,0.614426133024974,0.395658863190582,0.640413505216868,0,0.279182999001381,0.56276261003168,0.45839474333043,0.883885756421003,0.711858403995515,0.931997229126503,0.757261933331841,0.529000920747499,2.31891590961342,0,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.70667914902068,2.11265129665021,0,0,0,0.649473123033642,0,1.01104889002957,0.79928715803342,1.03575153458869,0.29688427812965,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,0.823120949949934,0.125666591329675,1.48316980640624,0.433798070759735,0.884610551949874,2.58826959915855,1.10420759230197,1.93950101254089,0,0.292780797011547,0.41889341362691,0.255457055208591,2.39630249011841,2.99951365496704,2.28726408731516,0.449371918214468,1.83000241127451,0.628271760564322,2.25971616249959,4.34716277461562,0.62336413367868,1.1356888414743,1.52759045775474,1.11966273549084,2.77995034277042,0,0.910843100738926,0.229902104433473,1.80062129805349,0.753524089178575,1.2246569847239,0.384341160854549,0.374806898238915,0.258703370739016,0.646703978798527,1.13463648100692,0.527853372491847,1.7535658594206,1.66828349535359,1.39300866608867,1.02891068203972,0.59710280045548,0.702213187313235,2.83082697826187,1.98914449576915,1.24275463521301,1.40715635988658,0.36012412292203,0.473489471170421,1.18058539048442,0.771335564436891,0.465067889500816,0.536546802799238,1.16765342367169,0.658239399653922,1.31333971263276,0.729619285912702,0.730999937126662,0.658650345873152,0.536825675041487,1.47202963994889,1.54356918568927,0,0,1.06644125267617,0.928946687441754,0.515469845288373,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.823494773620054,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0,1.32767530667157,0.685491075658373,0,0.203651327845314,0.387904974335251,0.98190147846446,0.822074982615345,0.147610147979602,0.156998727841375,0.493588655687202,0.592905254174298,0.500535317148282,0.196558995113203,0.224862112384854,0,0,0,0.863088412352432,0.810676133875177,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0.964887042726734,0.184753190166605,0.568474235311454,0.651859905768103,0.339490171550376,1.40814148973101,0.670025029767263,0.476087281772027,1.17080188714679,0.788175720530955,0.8858587585951,0.478364305972461,0.655453258862952,0,0.578596234326046,0,0,0,2.20749397043786,0.481651769963376,0.468846746368813,0.655739781506702,0.504941854408746,0.94652465824877,0.390438744296638,0.861693590931196,0.716906393857656,1.11399337041197,0.566153061577665,1.21443210502468,0.584511715822624,0.790575555893047,1.92792789853084,0.851640511249612,0.534196811001766,1.46598263418218,1.81467135269789,0,0.971122544619926,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,2.32585463851399,0.727067458955011,0,0.316036757935816,0,0,1.36175842301515,0.18006109403131,0,0.643011105094777,0.886701168211368,0.891844088010353,0.658196082408484,1.2178597964584,1.64270195644597,0.42366414172764,0.220528398054962,0.8244312647074,1.29171541356724,1.38719727334758,0.835606408021955,0.984845398470368,0.291480836629851,0.18542530201051,0.341741761595705,0.82554747185289,0.555583582109135,0,0,0,4.24946074984638,6.01791244991729,4.14599921413271,0,0.632671987162271,1.01659733563424,0.972048067396211,0.627264888043406,1.31017538247707,0.404593039154462,1.07449492442937,1.30877970992015,0.388844919875379,1.24267862617385,2.25477175473676,0.299033092087958,0.827292452285488,0.583353565032143,1.42075805825504,0.506868376472335,0.938857909166032,0.5208175393758,2.30690557736564,1.44950472495604,1.15212002503146,0,1.21635129174099,0.718976700153791,0.129920822977795,0.895133478337407,0,0.120195449519969,0.295379054349154,0.807731599585181,0.228620419965,0.302478555410522,0.292373642219257,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,2.70465431645067,1.68914227906064,0.915758121336325,0.428736758158132,1.00314420807073,1.12950368523413,3.68260189205742,0.572895513439397,2.57779773515531,1.37016503954128,1.5107877947794,2.70009000092722,1.80128481289688,4.07828168085784,1.55328093525546,1.14166082342594,0.399024873401031,0.853668028770671,1.70174701947806,0.838452650511929,0.551530525350042,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.832326981263301,0.804096565378586,0.952587382566147,0.695305955669133,0.578727661391115,1.64834360321323,0,0.685738504770831,0.887379030796687,2.14592570952589,0.726732083161643,0.846984423737976,0.761531471025089,0.182927972872773,0.526139422875686,0.543216455383447,1.68342681497322,0.237270036248348,0.689531376628944,0.818462086339379,0.154936841185966,0.385813221962283,1.99848462350357,0.701794825336225,1.93383948643468,3.25190164517034,1.76473135295612,1.85494268496337|short_description=p4@Golph3}}
|EntrezGene=66629
|HGNC=
|MCL_coexpression_id=7
|UniProt=Q9CRA5,Q05BZ0
|association_with_transcript=38bp_to_NM_025673,uc007vhn.1,uc007vho.1,uc007vhp.1,uc011zrm.1_5end
|description=CAGE_peak_4_at_Golph3_5end
|id=chr15:12251289..12251302,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.64e-07,17
|phase1_expression=1.76163731815273,0.348975407639361,3.18499467572675,1.51232105653415,2.00358291978539,0.16787927191189,0.934450562382103,1.93684985162364,16.472280491745,23.4064526321993,0.34243593645101,0.478632953972018,1.36960583944965,1.04904482902797,0,0.202475267389826,0,0,0.411343300817216,0,0.765389611359628,0.397163804803541,0.522399578277871,0.47997726838022,0.45881856213434,0.57423196411502,0.86152399231815,1.07735616342945,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.332469290716985,0.612508068787107,2.92972141515835,0,0,4.1176204162171,2.04913645487534,0.485510353031154,1.00717454380462,0.405507724878058,1.46837401729345,2.34717403304412,1.30815093828268,2.19686182734472,2.13872888981712,0.419959264876088,0,0.671130424230945,2.17608642603403,2.68875039313971,0.771778308107841,0.573066879877513,1.03134418455488,0.606949382578793,0.528990979272033,1.26766280701236,1.69422266034566,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.622137673850866,0.540023753326763,0.841299845405528,1.14260393761521,1.10434270475807,0.489963196859816,0.575072826109418,0,0,0.383062014255563,0.614426133024974,0.395658863190582,0.640413505216868,0,0.279182999001381,0.56276261003168,0.45839474333043,0.883885756421003,0.711858403995515,0.931997229126503,0.757261933331841,0.529000920747499,2.31891590961342,0,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.70667914902068,2.11265129665021,0,0,0,0.649473123033642,0,1.01104889002957,0.79928715803342,1.03575153458869,0.29688427812965,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,0.823120949949934,0.125666591329675,1.48316980640624,0.433798070759735,0.884610551949874,2.58826959915855,1.10420759230197,1.93950101254089,0,0.292780797011547,0.41889341362691,0.255457055208591,2.39630249011841,2.99951365496704,2.28726408731516,0.449371918214468,1.83000241127451,0.628271760564322,2.25971616249959,4.34716277461562,0.62336413367868,1.1356888414743,1.52759045775474,1.11966273549084,2.77995034277042,0,0.910843100738926,0.229902104433473,1.80062129805349,0.753524089178575,1.2246569847239,0.384341160854549,0.374806898238915,0.258703370739016,0.646703978798527,1.13463648100692,0.527853372491847,1.7535658594206,1.66828349535359,1.39300866608867,1.02891068203972,0.59710280045548,0.702213187313235,2.83082697826187,1.98914449576915,1.24275463521301,1.40715635988658,0.36012412292203,0.473489471170421,1.18058539048442,0.771335564436891,0.465067889500816,0.536546802799238,1.16765342367169,0.658239399653922,1.31333971263276,0.729619285912702,0.730999937126662,0.658650345873152,0.536825675041487,1.47202963994889,1.54356918568927,0,0,1.06644125267617,0.928946687441754,0.515469845288373,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.823494773620054,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0,1.32767530667157,0.685491075658373,0,0.203651327845314,0.387904974335251,0.98190147846446,0.822074982615345,0.147610147979602,0.156998727841375,0.493588655687202,0.592905254174298,0.500535317148282,0.196558995113203,0.224862112384854,0,0,0,0.863088412352432,0.810676133875177,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0.964887042726734,0.184753190166605,0.568474235311454,0.651859905768103,0.339490171550376,1.40814148973101,0.670025029767263,0.476087281772027,1.17080188714679,0.788175720530955,0.8858587585951,0.478364305972461,0.655453258862952,0,0.578596234326046,0,0,0,2.20749397043786,0.481651769963376,0.468846746368813,0.655739781506702,0.504941854408746,0.94652465824877,0.390438744296638,0.861693590931196,0.716906393857656,1.11399337041197,0.566153061577665,1.21443210502468,0.584511715822624,0.790575555893047,1.92792789853084,0.851640511249612,0.534196811001766,1.46598263418218,1.81467135269789,0,0.971122544619926,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,2.32585463851399,0.727067458955011,0,0.316036757935816,0,0,1.36175842301515,0.18006109403131,0,0.643011105094777,0.886701168211368,0.891844088010353,0.658196082408484,1.2178597964584,1.64270195644597,0.42366414172764,0.220528398054962,0.8244312647074,1.29171541356724,1.38719727334758,0.835606408021955,0.984845398470368,0.291480836629851,0.18542530201051,0.341741761595705,0.82554747185289,0.555583582109135,0,0,0,4.24946074984638,6.01791244991729,4.14599921413271,0,0.632671987162271,1.01659733563424,0.972048067396211,0.627264888043406,1.31017538247707,0.404593039154462,1.07449492442937,1.30877970992015,0.388844919875379,1.24267862617385,2.25477175473676,0.299033092087958,0.827292452285488,0.583353565032143,1.42075805825504,0.506868376472335,0.938857909166032,0.5208175393758,2.30690557736564,1.44950472495604,1.15212002503146,0,1.21635129174099,0.718976700153791,0.129920822977795,0.895133478337407,0,0.120195449519969,0.295379054349154,0.807731599585181,0.228620419965,0.302478555410522,0.292373642219257,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,2.70465431645067,1.68914227906064,0.915758121336325,0.428736758158132,1.00314420807073,1.12950368523413,3.68260189205742,0.572895513439397,2.57779773515531,1.37016503954128,1.5107877947794,2.70009000092722,1.80128481289688,4.07828168085784,1.55328093525546,1.14166082342594,0.399024873401031,0.853668028770671,1.70174701947806,0.838452650511929,0.551530525350042,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.832326981263301,0.804096565378586,0.952587382566147,0.695305955669133,0.578727661391115,1.64834360321323,0,0.685738504770831,0.887379030796687,2.14592570952589,0.726732083161643,0.846984423737976,0.761531471025089,0.182927972872773,0.526139422875686,0.543216455383447,1.68342681497322,0.237270036248348,0.689531376628944,0.818462086339379,0.154936841185966,0.385813221962283,1.99848462350357,0.701794825336225,1.93383948643468,3.25190164517034,1.76473135295612,1.85494268496337
|short_description=p4@Golph3
}}

Revision as of 10:13, 13 September 2013

Short description:p4@Golph3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Golph3_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 38bp_to_NM_025673, uc007vhn.1, uc007vho.1, uc007vhp.1, uc011zrm.1_5end
EntrezGene:Golph3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Golph3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of cerebral cortex9.64e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:12251289..12251302,%2B&oldid=2925023"