FFCP PHASE1:Mm9::chr8:96704054..96704065,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=665|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:96704054..96704065,-|id=chr8:96704054..96704065,-|ontology_enrichment_celltype=CL:0002453!1.93e-17!8;CL:0000128!1.15e-13!6;CL:0000126!1.15e-13!6;CL:0000127!1.15e-13!6;CL:0000333!1.35e-13!10;CL:0000095!1.35e-13!10;CL:0000243!1.35e-13!10;CL:0000123!1.35e-13!10;CL:0000125!1.35e-13!10;CL:0000030!1.35e-13!10;CL:0000339!1.35e-13!10|ontology_enrichment_celltype_v019_2=CL:0000128,2.25e-65,6;CL:0000126,2.25e-65,6;CL:0000127,2.25e-65,6;CL:0002453,3.83e-49,8;CL:0000333,2.16e-39,10;CL:0000095,2.16e-39,10;CL:0000243,2.16e-39,10;CL:0000123,2.16e-39,10;CL:0000125,2.16e-39,10;CL:0000030,2.16e-39,10;CL:0000339,2.16e-39,10;CL:0002603,3.06e-23,2;CL:0002605,1.40e-22,2;CL:0002604,1.40e-22,2;CL:0002319,1.87e-12,43;CL:0000221,3.59e-12,44;CL:0000133,3.59e-12,44;CL:0000219,5.55e-10,54;CL:0002321,5.63e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.81e-12,4;UBERON:0002680,3.81e-12,4;UBERON:0001895,3.81e-12,4;UBERON:0010092,3.81e-12,4;UBERON:0006215,3.81e-12,4;UBERON:0004733,2.07e-08,6;UBERON:0004732,2.07e-08,6;UBERON:0002028,2.07e-08,6;UBERON:0007277,2.07e-08,6;UBERON:0001017,2.65e-07,73;UBERON:0001954,3.77e-07,7;UBERON:0003022,3.77e-07,7;UBERON:0002421,3.77e-07,7;UBERON:0000349,3.77e-07,7;UBERON:0002600,3.77e-07,7;UBERON:0001016,4.19e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,3.12956537739216,5.88667922227206,2.85592037554813,1.94429899074283,1.39986421625363,5.75010257459886,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,0,0,0,0,4.75979933595425,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr8:96704054..96704065,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=665 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:96704054..96704065,- | |||
|id=chr8:96704054..96704065,- | |||
|ontology_enrichment_celltype=CL:0002453!1.93e-17!8;CL:0000128!1.15e-13!6;CL:0000126!1.15e-13!6;CL:0000127!1.15e-13!6;CL:0000333!1.35e-13!10;CL:0000095!1.35e-13!10;CL:0000243!1.35e-13!10;CL:0000123!1.35e-13!10;CL:0000125!1.35e-13!10;CL:0000030!1.35e-13!10;CL:0000339!1.35e-13!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.25e-65,6;CL:0000126,2.25e-65,6;CL:0000127,2.25e-65,6;CL:0002453,3.83e-49,8;CL:0000333,2.16e-39,10;CL:0000095,2.16e-39,10;CL:0000243,2.16e-39,10;CL:0000123,2.16e-39,10;CL:0000125,2.16e-39,10;CL:0000030,2.16e-39,10;CL:0000339,2.16e-39,10;CL:0002603,3.06e-23,2;CL:0002605,1.40e-22,2;CL:0002604,1.40e-22,2;CL:0002319,1.87e-12,43;CL:0000221,3.59e-12,44;CL:0000133,3.59e-12,44;CL:0000219,5.55e-10,54;CL:0002321,5.63e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.81e-12,4;UBERON:0002680,3.81e-12,4;UBERON:0001895,3.81e-12,4;UBERON:0010092,3.81e-12,4;UBERON:0006215,3.81e-12,4;UBERON:0004733,2.07e-08,6;UBERON:0004732,2.07e-08,6;UBERON:0002028,2.07e-08,6;UBERON:0007277,2.07e-08,6;UBERON:0001017,2.65e-07,73;UBERON:0001954,3.77e-07,7;UBERON:0003022,3.77e-07,7;UBERON:0002421,3.77e-07,7;UBERON:0000349,3.77e-07,7;UBERON:0002600,3.77e-07,7;UBERON:0001016,4.19e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,3.12956537739216,5.88667922227206,2.85592037554813,1.94429899074283,1.39986421625363,5.75010257459886,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,0,0,0,0,4.75979933595425,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr8:96704054..96704065,- | |||
}} |
Revision as of 16:30, 14 September 2013
Short description: | p@chr8:96704054..96704065, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:96704054..96704065, - |
Coexpression cluster: | MCL_coexpression_mm9:665 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.25e-65 | 6 |
macroglial cell | 2.25e-65 | 6 |
astrocyte | 2.25e-65 | 6 |
oligodendrocyte precursor cell | 3.83e-49 | 8 |
migratory neural crest cell | 2.16e-39 | 10 |
neuron associated cell | 2.16e-39 | 10 |
glial cell (sensu Vertebrata) | 2.16e-39 | 10 |
neuron associated cell (sensu Vertebrata) | 2.16e-39 | 10 |
glial cell | 2.16e-39 | 10 |
glioblast | 2.16e-39 | 10 |
glioblast (sensu Vertebrata) | 2.16e-39 | 10 |
astrocyte of the cerebellum | 3.06e-23 | 2 |
astrocyte of the cerebral cortex | 1.40e-22 | 2 |
astrocyte of the hippocampus | 1.40e-22 | 2 |
neural cell | 1.87e-12 | 43 |
ectodermal cell | 3.59e-12 | 44 |
neurectodermal cell | 3.59e-12 | 44 |
motile cell | 5.55e-10 | 54 |
embryonic cell | 5.63e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.81e-12 | 4 |
regional part of metencephalon | 3.81e-12 | 4 |
metencephalon | 3.81e-12 | 4 |
future metencephalon | 3.81e-12 | 4 |
rhombic lip | 3.81e-12 | 4 |
segmental subdivision of hindbrain | 2.07e-08 | 6 |
segmental subdivision of nervous system | 2.07e-08 | 6 |
hindbrain | 2.07e-08 | 6 |
presumptive hindbrain | 2.07e-08 | 6 |
central nervous system | 2.65e-07 | 73 |
Ammon's horn | 3.77e-07 | 7 |
lobe parts of cerebral cortex | 3.77e-07 | 7 |
hippocampal formation | 3.77e-07 | 7 |
limbic system | 3.77e-07 | 7 |
limbic lobe | 3.77e-07 | 7 |
nervous system | 4.19e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.