FFCP PHASE1:Mm9::chr4:77649487..77649490,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:77649487..77649490,-|id=chr4:77649487..77649490,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.57e-34!10;UBERON:0000411!7.57e-34!10;UBERON:0001950!7.57e-34!10;UBERON:0002020!7.22e-21!34;UBERON:0000956!1.13e-19!21;UBERON:0001869!1.13e-19!21;UBERON:0000203!1.13e-19!21;UBERON:0002619!1.43e-19!17;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0001049!4.55e-13!52;UBERON:0005068!4.55e-13!52;UBERON:0006241!4.55e-13!52;UBERON:0007135!4.55e-13!52;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0003080!4.01e-12!40;UBERON:0002616!1.01e-11!49;UBERON:0000955!1.86e-11!50;UBERON:0006238!1.86e-11!50;UBERON:0001017!1.78e-10!73;UBERON:0005743!1.78e-10!73;UBERON:0000073!3.82e-10!75;UBERON:0001016!3.82e-10!75;UBERON:0003056!1.21e-09!49;UBERON:0002346!4.18e-09!71;UBERON:0003075!4.18e-09!71;UBERON:0007284!4.18e-09!71;UBERON:0000033!9.14e-09!63;UBERON:0004121!6.05e-07!102;UBERON:0000924!6.05e-07!102;UBERON:0006601!6.05e-07!102;UBERON:0001851!9.48e-07!1;UBERON:0005889!9.48e-07!1;UBERON:0000470!9.48e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.24e-27,10;UBERON:0000411,6.24e-27,10;UBERON:0001950,6.24e-27,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0.767146371990992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,2.29158205375759,4.29632955859219,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr4:77649487..77649490,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:77649487..77649490,- | |||
|id=chr4:77649487..77649490,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.57e-34!10;UBERON:0000411!7.57e-34!10;UBERON:0001950!7.57e-34!10;UBERON:0002020!7.22e-21!34;UBERON:0000956!1.13e-19!21;UBERON:0001869!1.13e-19!21;UBERON:0000203!1.13e-19!21;UBERON:0002619!1.43e-19!17;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0001049!4.55e-13!52;UBERON:0005068!4.55e-13!52;UBERON:0006241!4.55e-13!52;UBERON:0007135!4.55e-13!52;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0003080!4.01e-12!40;UBERON:0002616!1.01e-11!49;UBERON:0000955!1.86e-11!50;UBERON:0006238!1.86e-11!50;UBERON:0001017!1.78e-10!73;UBERON:0005743!1.78e-10!73;UBERON:0000073!3.82e-10!75;UBERON:0001016!3.82e-10!75;UBERON:0003056!1.21e-09!49;UBERON:0002346!4.18e-09!71;UBERON:0003075!4.18e-09!71;UBERON:0007284!4.18e-09!71;UBERON:0000033!9.14e-09!63;UBERON:0004121!6.05e-07!102;UBERON:0000924!6.05e-07!102;UBERON:0006601!6.05e-07!102;UBERON:0001851!9.48e-07!1;UBERON:0005889!9.48e-07!1;UBERON:0000470!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.24e-27,10;UBERON:0000411,6.24e-27,10;UBERON:0001950,6.24e-27,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0.767146371990992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,2.29158205375759,4.29632955859219,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr4:77649487..77649490,- | |||
}} |
Revision as of 05:28, 14 September 2013
Short description: | p@chr4:77649487..77649490, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:77649487..77649490, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.24e-27 | 10 |
visual cortex | 6.24e-27 | 10 |
neocortex | 6.24e-27 | 10 |
regional part of cerebral cortex | 2.41e-16 | 17 |
cerebral cortex | 1.90e-13 | 21 |
cerebral hemisphere | 1.90e-13 | 21 |
pallium | 1.90e-13 | 21 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.