FFCP PHASE1:Mm9::chr13:29041005..29041016,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:29041005..29041016,-|id=chr13:29041005..29041016,-|ontology_enrichment_celltype=CL:0000540!5.95e-08!33;CL:0000047!5.95e-08!33;CL:0000031!5.95e-08!33;CL:0000404!5.95e-08!33;CL:0002319!7.53e-08!43;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0000221!1.76e-07!44;CL:0000133!1.76e-07!44;CL:0000055!1.98e-07!50;CL:0002609!3.33e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,8.31e-24,6;CL:0000117,1.19e-18,23;CL:0000337,1.19e-18,23;CL:0002608,1.37e-17,3;CL:0000540,1.11e-12,33;CL:0000047,1.11e-12,33;CL:0000031,1.11e-12,33;CL:0000404,1.11e-12,33;CL:0002319,9.17e-12,43;CL:0000221,1.82e-11,44;CL:0000133,1.82e-11,44;CL:0000393,1.46e-10,39;CL:0000211,1.46e-10,39;CL:0002613,1.55e-08,3;CL:0000120,7.57e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.86e-09,29;UBERON:0002791,4.86e-09,29;UBERON:0001893,4.86e-09,29;UBERON:0001954,7.61e-08,7;UBERON:0003022,7.61e-08,7;UBERON:0002421,7.61e-08,7;UBERON:0000349,7.61e-08,7;UBERON:0002600,7.61e-08,7;UBERON:0002020,1.31e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0,1.8664130215526,0.810035629990144,1.68259969081106,0,0,1.34739879136449,1.43768206527355,1.83843757322004,0,0,0,1.97829431595291,1.28082701043374,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0.260240885925407,0,0,1.50704817835715,0,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0,0,0,0,0.720248245844059,0.23674473558521,0.196764231747404,0.617068451549513,1.39520366850245,0,0,0,0,0,0,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,0.853153002140936,0.928946687441754,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,1.22190796707189,0.387904974335251,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,1.18821560042632,0.938760993154008,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0,0.283076530788832,0.809621403349789,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0.989820737835213,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,1.68956125490778,0.234714477291508,0,0.104859344425711,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0,0.295379054349154,0,0,0.302478555410522,0.194915761479505,0,0.116876902181569,0,0.443971906748129,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.62272408550506,0,0,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr13:29041005..29041016,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:29041005..29041016,- | |||
|id=chr13:29041005..29041016,- | |||
|ontology_enrichment_celltype=CL:0000540!5.95e-08!33;CL:0000047!5.95e-08!33;CL:0000031!5.95e-08!33;CL:0000404!5.95e-08!33;CL:0002319!7.53e-08!43;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0000221!1.76e-07!44;CL:0000133!1.76e-07!44;CL:0000055!1.98e-07!50;CL:0002609!3.33e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.31e-24,6;CL:0000117,1.19e-18,23;CL:0000337,1.19e-18,23;CL:0002608,1.37e-17,3;CL:0000540,1.11e-12,33;CL:0000047,1.11e-12,33;CL:0000031,1.11e-12,33;CL:0000404,1.11e-12,33;CL:0002319,9.17e-12,43;CL:0000221,1.82e-11,44;CL:0000133,1.82e-11,44;CL:0000393,1.46e-10,39;CL:0000211,1.46e-10,39;CL:0002613,1.55e-08,3;CL:0000120,7.57e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.86e-09,29;UBERON:0002791,4.86e-09,29;UBERON:0001893,4.86e-09,29;UBERON:0001954,7.61e-08,7;UBERON:0003022,7.61e-08,7;UBERON:0002421,7.61e-08,7;UBERON:0000349,7.61e-08,7;UBERON:0002600,7.61e-08,7;UBERON:0002020,1.31e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0,1.8664130215526,0.810035629990144,1.68259969081106,0,0,1.34739879136449,1.43768206527355,1.83843757322004,0,0,0,1.97829431595291,1.28082701043374,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0.260240885925407,0,0,1.50704817835715,0,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0,0,0,0,0.720248245844059,0.23674473558521,0.196764231747404,0.617068451549513,1.39520366850245,0,0,0,0,0,0,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,0.853153002140936,0.928946687441754,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,1.22190796707189,0.387904974335251,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,1.18821560042632,0.938760993154008,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0,0.283076530788832,0.809621403349789,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0.989820737835213,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,1.68956125490778,0.234714477291508,0,0.104859344425711,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0,0.295379054349154,0,0,0.302478555410522,0.194915761479505,0,0.116876902181569,0,0.443971906748129,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.62272408550506,0,0,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr13:29041005..29041016,- | |||
}} |
Revision as of 00:18, 13 September 2013
Short description: | p@chr13:29041005..29041016, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:29041005..29041016, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.31e-24 | 6 |
CNS neuron (sensu Vertebrata) | 1.19e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-18 | 23 |
hippocampal neuron | 1.37e-17 | 3 |
neuron | 1.11e-12 | 33 |
neuronal stem cell | 1.11e-12 | 33 |
neuroblast | 1.11e-12 | 33 |
electrically signaling cell | 1.11e-12 | 33 |
neural cell | 9.17e-12 | 43 |
ectodermal cell | 1.82e-11 | 44 |
neurectodermal cell | 1.82e-11 | 44 |
electrically responsive cell | 1.46e-10 | 39 |
electrically active cell | 1.46e-10 | 39 |
striatum neuron | 1.55e-08 | 3 |
granule cell | 7.57e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 4.86e-09 | 29 |
regional part of telencephalon | 4.86e-09 | 29 |
telencephalon | 4.86e-09 | 29 |
Ammon's horn | 7.61e-08 | 7 |
lobe parts of cerebral cortex | 7.61e-08 | 7 |
hippocampal formation | 7.61e-08 | 7 |
limbic system | 7.61e-08 | 7 |
limbic lobe | 7.61e-08 | 7 |
gray matter | 1.31e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.