FFCP PHASE1:Mm9::chr17:35096177..35096183,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15511|HGNC=|MCL_coexpression_id=26|UniProt=P17879,Q91ZU4|association_with_transcript=0bp_to_ENSMUST00000165202,ENSMUST00000172753,NM_010478,uc008ceo.1_5end|description=CAGE_peak_1_at_Hspa1b_5end|id=chr17:35096177..35096183,-|ontology_enrichment_celltype=CL:0002563!2.83e-07!9;CL:0002251!2.83e-07!9;CL:0000066!5.55e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,8.90e-09,25;CL:0002563,4.59e-08,9;CL:0002251,4.59e-08,9;CL:0002076,5.49e-07,15;CL:0000223,9.07e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!2.83e-07!9;UBERON:0004808!2.83e-07!9;UBERON:0001277!2.83e-07!9;UBERON:0000485!5.87e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.59e-08,9;UBERON:0004808,4.59e-08,9;UBERON:0001277,4.59e-08,9;UBERON:0000485,1.05e-07,11|phase1_expression=2.40223270657191,49.5545078847893,25.479957405814,88.0170854902875,87.1558570106644,33.4079751104661,47.8905913220828,0.645616617207881,6.05391505252167,11.0010327371337,0.34243593645101,1.67521533890206,0,0.699363219351979,0.333109761815663,0,0.699561878128147,0.157731082679119,0,0,6.80346321208558,0.397163804803541,0.522399578277871,1.11994695955385,0.91763712426868,37.8993096315913,26.7072437618626,24.5637205261914,1.33016393619462,1.26015064879965,0,1.27006134691926,1.84519436275371,0,19.0642069035841,8.6442015586416,24.5003227514843,0,0,0,2.35292595212406,0,0.485510353031154,9.9458486200706,7.40051597902456,4.22157529971868,0,0,0,0,0,0,3.6912173332702,7.97898356212479,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,1968.7596072618,6.0229671388697,0,0,3.89865850468601,3.58421509677868,4.91555470461132,3.74946709671727,7.53379413348319,3.5333957451034,1.40843419776681,1.28326477414318,0,0,5.19578498426914,8.36087556067825,6.57181778519218,27.5183150122935,0.776813650941515,12.7660239595749,3.81667718885499,4.87144765299426,2.07553947530453,1.80867168663147,2.82212897125692,2.76466500925286,3.70792451601561,3.18118585223806,1.76922110389975,0.485300549842228,0.220841518460394,0.484875253135222,3.72783522436244,0.292780797011547,0.209446706813455,2.04365644166873,10.9031763300387,11.9980546198682,24.5245538251015,0.449371918214468,0.457500602818626,0,1.04294592115366,0.255715457330331,0.20778804455956,0.486723789203273,1.42575109390443,2.61254638281195,8.84529654517861,7.99679052368601,0.390361328888111,0.459804208866946,0.360124259610698,1.9591626318643,0.408218994907967,0.896796041993948,0.562210347358373,8.01980449290949,0.215567992932842,0.378212160335639,1.05570674498369,1.7535658594206,5.56094498451196,7.3132954969655,12.3469281844766,2.18937693500343,18.2575428701441,20.8451804762919,14.2081749697796,0,0,0.540186184383045,0.473489471170421,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.56748166682099,1.16959989940266,0.658650345873152,1.07365135008297,2.73376933133365,0,2.31293148088659,1.85115396664481,0.639864751605702,4.64473343720877,0.644337306610467,0,0.22237804384487,1.14135375667535,2.84717436926707,1.64698954724011,1.75934646160189,0.994782360205754,2.33956904542944,6.29173586057955,2.16138049874694,1.39398891278057,0.379335801906163,1.14248512609729,1.1270773567308,0.814605311381257,1.74557238450863,2.52488951605147,2.71917109634306,6.34723636312289,3.92496819603437,6.91024117962083,4.15033677922008,0.333690211432188,0,0,0.202860121388503,0,0,1.43848068725405,0,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,1.26289438973556,0.717589654087649,0,3.69506380333209,0.189491411770485,1.46668478797823,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,1.36593553500459,0.315270288212382,0.44292937929755,0.797273843287435,3.4411296090305,0.690739927463582,0.433947175744535,1.50791283939272,3.26343410291226,2.45882136509518,3.03530420935206,0.80275294993896,0.35163505977661,0.327869890753351,1.76729649043061,0,0,0,0,0,0,0,0,0,1.28528526568723,3.40656204499845,1.95872164033981,0.977321756121456,5.93892442701128,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,0,0.356497378384721,0.316036757935816,0,1.03135543248187,3.40439605753788,1.26042765821917,0.129358683782755,0.857348140126369,0,0.356737635204141,0.822745103010605,0.913394847343798,3.75474732901937,5.2958017715955,23.376010193826,11.5420377059036,6.78150592122803,8.02161901544473,10.8628833042854,11.3257220824092,2.33184669303881,0.18542530201051,0.170870880797853,0,0.740778109478847,0,0.410082683163076,0,2.37969801991397,5.73800954526998,8.153798454461,1.90934123603023,0,0.203319467126849,2.37611749807963,3.13632444021703,3.27543845619266,5.66430254816247,3.96736587481612,3.66458318777641,3.49960427887841,2.4853572523477,0.56369293868419,2.0932316446157,4.13646226142744,4.66682852025714,4.1331143512874,3.04121025883401,4.10750335260139,2.0832701575032,2.83120229949419,0.724752362478018,1.15212002503146,0.316011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| ||
|EntrezGene=15511 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=P17879,Q91ZU4 | |||
|association_with_transcript=0bp_to_ENSMUST00000165202,ENSMUST00000172753,NM_010478,uc008ceo.1_5end | |||
|description=CAGE_peak_1_at_Hspa1b_5end | |||
|id=chr17:35096177..35096183,- | |||
|ontology_enrichment_celltype=CL:0002563!2.83e-07!9;CL:0002251!2.83e-07!9;CL:0000066!5.55e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.90e-09,25;CL:0002563,4.59e-08,9;CL:0002251,4.59e-08,9;CL:0002076,5.49e-07,15;CL:0000223,9.07e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.83e-07!9;UBERON:0004808!2.83e-07!9;UBERON:0001277!2.83e-07!9;UBERON:0000485!5.87e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.59e-08,9;UBERON:0004808,4.59e-08,9;UBERON:0001277,4.59e-08,9;UBERON:0000485,1.05e-07,11 | |||
|phase1_expression=2.40223270657191,49.5545078847893,25.479957405814,88.0170854902875,87.1558570106644,33.4079751104661,47.8905913220828,0.645616617207881,6.05391505252167,11.0010327371337,0.34243593645101,1.67521533890206,0,0.699363219351979,0.333109761815663,0,0.699561878128147,0.157731082679119,0,0,6.80346321208558,0.397163804803541,0.522399578277871,1.11994695955385,0.91763712426868,37.8993096315913,26.7072437618626,24.5637205261914,1.33016393619462,1.26015064879965,0,1.27006134691926,1.84519436275371,0,19.0642069035841,8.6442015586416,24.5003227514843,0,0,0,2.35292595212406,0,0.485510353031154,9.9458486200706,7.40051597902456,4.22157529971868,0,0,0,0,0,0,3.6912173332702,7.97898356212479,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,1968.7596072618,6.0229671388697,0,0,3.89865850468601,3.58421509677868,4.91555470461132,3.74946709671727,7.53379413348319,3.5333957451034,1.40843419776681,1.28326477414318,0,0,5.19578498426914,8.36087556067825,6.57181778519218,27.5183150122935,0.776813650941515,12.7660239595749,3.81667718885499,4.87144765299426,2.07553947530453,1.80867168663147,2.82212897125692,2.76466500925286,3.70792451601561,3.18118585223806,1.76922110389975,0.485300549842228,0.220841518460394,0.484875253135222,3.72783522436244,0.292780797011547,0.209446706813455,2.04365644166873,10.9031763300387,11.9980546198682,24.5245538251015,0.449371918214468,0.457500602818626,0,1.04294592115366,0.255715457330331,0.20778804455956,0.486723789203273,1.42575109390443,2.61254638281195,8.84529654517861,7.99679052368601,0.390361328888111,0.459804208866946,0.360124259610698,1.9591626318643,0.408218994907967,0.896796041993948,0.562210347358373,8.01980449290949,0.215567992932842,0.378212160335639,1.05570674498369,1.7535658594206,5.56094498451196,7.3132954969655,12.3469281844766,2.18937693500343,18.2575428701441,20.8451804762919,14.2081749697796,0,0,0.540186184383045,0.473489471170421,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.56748166682099,1.16959989940266,0.658650345873152,1.07365135008297,2.73376933133365,0,2.31293148088659,1.85115396664481,0.639864751605702,4.64473343720877,0.644337306610467,0,0.22237804384487,1.14135375667535,2.84717436926707,1.64698954724011,1.75934646160189,0.994782360205754,2.33956904542944,6.29173586057955,2.16138049874694,1.39398891278057,0.379335801906163,1.14248512609729,1.1270773567308,0.814605311381257,1.74557238450863,2.52488951605147,2.71917109634306,6.34723636312289,3.92496819603437,6.91024117962083,4.15033677922008,0.333690211432188,0,0,0.202860121388503,0,0,1.43848068725405,0,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,1.26289438973556,0.717589654087649,0,3.69506380333209,0.189491411770485,1.46668478797823,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,1.36593553500459,0.315270288212382,0.44292937929755,0.797273843287435,3.4411296090305,0.690739927463582,0.433947175744535,1.50791283939272,3.26343410291226,2.45882136509518,3.03530420935206,0.80275294993896,0.35163505977661,0.327869890753351,1.76729649043061,0,0,0,0,0,0,0,0,0,1.28528526568723,3.40656204499845,1.95872164033981,0.977321756121456,5.93892442701128,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,0,0.356497378384721,0.316036757935816,0,1.03135543248187,3.40439605753788,1.26042765821917,0.129358683782755,0.857348140126369,0,0.356737635204141,0.822745103010605,0.913394847343798,3.75474732901937,5.2958017715955,23.376010193826,11.5420377059036,6.78150592122803,8.02161901544473,10.8628833042854,11.3257220824092,2.33184669303881,0.18542530201051,0.170870880797853,0,0.740778109478847,0,0.410082683163076,0,2.37969801991397,5.73800954526998,8.153798454461,1.90934123603023,0,0.203319467126849,2.37611749807963,3.13632444021703,3.27543845619266,5.66430254816247,3.96736587481612,3.66458318777641,3.49960427887841,2.4853572523477,0.56369293868419,2.0932316446157,4.13646226142744,4.66682852025714,4.1331143512874,3.04121025883401,4.10750335260139,2.0832701575032,2.83120229949419,0.724752362478018,1.15212002503146,0.316011120628178,2.43270258348197,1.64337531463724,0.77952493786677,1.07416017400489,0.198681354781265,1.20195449519969,0.443068581523732,0.504832249740738,0.990688486514998,0.403304740547362,1.36441033035653,0.384847366561318,0.584384510907845,11.789979947991,6.21560669447381,2.51198798506532,7.38692312001945,8.30715254338419,10.322536149815,11.3554007045704,35.5851509271249,8.02515366456581,0,0.460325236507177,0,0,0,1.5107877947794,0,0,1.81256963593682,0.51776031175182,0.62272408550506,1.59609949360412,0.341467211508268,3.40349403895612,0.209613162627982,2.5738091183002,1.77797382241292,2.06035057238894,1.60459604795908,1.26348605881899,0.50695859978048,1.88626341386076,1.21733959710847,1.47257850531199,0.976402972245426,2.85776214769844,0.811190281613988,0.964546102318525,2.47251540481984,1.47198920134397,1.02860775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| |||
|short_description=p1@Hspa1b | |||
}} | |||
Revision as of 14:18, 13 September 2013
| Short description: | p1@Hspa1b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Hspa1b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:26 |
| Association with transcript: | 0bp_to_ENSMUST00000165202, ENSMUST00000172753, NM_010478, uc008ceo.1_5end |
| EntrezGene: | Hspa1b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 8.90e-09 | 25 |
| intestinal epithelial cell | 4.59e-08 | 9 |
| epithelial cell of alimentary canal | 4.59e-08 | 9 |
| endo-epithelial cell | 5.49e-07 | 15 |
| endodermal cell | 9.07e-07 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 4.59e-08 | 9 |
| gastrointestinal system epithelium | 4.59e-08 | 9 |
| intestinal epithelium | 4.59e-08 | 9 |
| simple columnar epithelium | 1.05e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
