FFCP PHASE1:Mm9::chr13:20564933..20564958,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140580|HGNC=|MCL_coexpression_id=1|UniProt=Q8BPU7|association_with_transcript=-3bp_to_ENSMUST00000110493,uc007ppq.1,uc007ppr.1_5end|description=CAGE_peak_2_at_Elmo1_5end|id=chr13:20564933..20564958,+|ontology_enrichment_celltype=CL:0000117!5.36e-14!23;CL:0000337!5.36e-14!23;CL:0000540!2.93e-12!33;CL:0000047!2.93e-12!33;CL:0000031!2.93e-12!33;CL:0000404!2.93e-12!33;CL:0000221!7.87e-11!44;CL:0000133!7.87e-11!44;CL:0002319!9.00e-11!43;CL:0000393!4.97e-08!39;CL:0000211!4.97e-08!39;CL:0000055!5.64e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.13e-18,23;CL:0000337,3.13e-18,23;CL:0000540,2.47e-13,33;CL:0000047,2.47e-13,33;CL:0000031,2.47e-13,33;CL:0000404,2.47e-13,33;CL:0002319,6.35e-11,43;CL:0000221,1.94e-10,44;CL:0000133,1.94e-10,44;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.97e-27!75;UBERON:0001016!3.97e-27!75;UBERON:0001017!4.46e-27!73;UBERON:0005743!4.46e-27!73;UBERON:0002346!1.14e-25!71;UBERON:0003075!1.14e-25!71;UBERON:0007284!1.14e-25!71;UBERON:0004121!1.69e-24!102;UBERON:0000924!1.69e-24!102;UBERON:0006601!1.69e-24!102;UBERON:0000033!9.62e-24!63;UBERON:0001049!2.51e-23!52;UBERON:0005068!2.51e-23!52;UBERON:0006241!2.51e-23!52;UBERON:0007135!2.51e-23!52;UBERON:0000955!9.45e-23!50;UBERON:0006238!9.45e-23!50;UBERON:0002616!5.84e-22!49;UBERON:0003056!1.16e-20!49;UBERON:0002020!1.22e-18!34;UBERON:0003080!6.82e-18!40;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0002791!9.29e-16!29;UBERON:0003528!9.29e-16!29;UBERON:0001893!9.29e-16!29;UBERON:0007811!2.63e-11!86;UBERON:0000956!6.31e-11!21;UBERON:0001869!6.31e-11!21;UBERON:0000203!6.31e-11!21;UBERON:0000153!6.30e-10!94;UBERON:0002619!7.30e-09!17;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.10e-33,64;UBERON:0003075,5.10e-33,64;UBERON:0007284,5.10e-33,64;UBERON:0000073,1.68e-30,54;UBERON:0001017,3.14e-30,73;UBERON:0001016,9.19e-30,75;UBERON:0001049,2.99e-28,52;UBERON:0005068,2.99e-28,52;UBERON:0006241,2.99e-28,52;UBERON:0007135,2.99e-28,52;UBERON:0004121,4.08e-28,95;UBERON:0000924,4.08e-28,95;UBERON:0006601,4.08e-28,95;UBERON:0010371,4.31e-27,73;UBERON:0000955,1.60e-24,47;UBERON:0006238,1.60e-24,47;UBERON:0003056,2.11e-24,49;UBERON:0002020,8.29e-24,34;UBERON:0002616,1.62e-23,46;UBERON:0003080,1.14e-20,40;UBERON:0003528,5.94e-20,29;UBERON:0002791,5.94e-20,29;UBERON:0001893,5.94e-20,29;UBERON:0002780,9.58e-20,39;UBERON:0001890,9.58e-20,39;UBERON:0006240,9.58e-20,39;UBERON:0010314,7.49e-18,92;UBERON:0000956,1.65e-13,21;UBERON:0001869,1.65e-13,21;UBERON:0000203,1.65e-13,21;UBERON:0002619,9.27e-11,17;UBERON:0002021,9.95e-10,10;UBERON:0000411,9.95e-10,10;UBERON:0001950,9.95e-10,10;UBERON:0003076,5.13e-08,12;UBERON:0003057,5.13e-08,12;UBERON:0002420,1.05e-07,8;UBERON:0007245,1.05e-07,8;UBERON:0010009,1.05e-07,8;UBERON:0010011,1.05e-07,8;UBERON:0000454,1.05e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.979242459702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.878744730937887,0,0.55994568650145,0,0,0,0,0,0,0,63.9320016316329,65.5948814297321,45.6358610524449,0,0,0,0,0,13.1824048628098,4.61061966385865,36.1876746956587,37.53165085621,32.3900440481128,49.1319693174542,52.3458442055324,60.7554364106172,59.4241920313065,45.041720543891,105.711245759413,156.416989154355,131.794405533857,49.8530167620133,50.4096916249277,45.8403766089949,104.414441626516,60.7783618834214,64.6336588095907,54.8009168981022,64.9214864443909,72.5093844260419,0.37863096666592,1.36028808192214,0,0,0,0,0,0,4.63466586434781,0,0,0,0.704217098883403,0,0,0,0,0,0,2.62622923353838,0,0,0.520455980298408,0.304465478312141,0.461230994512117,1.50722640552623,1.64624189989987,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,117.112318804619,116.033475574654,0.255457055208591,0,0,0,117.136280014571,197.182759814828,129.298328324137,135.582969749976,126.067720463853,200.515462999975,154.615923703573,0.611036183101898,0.124406970610093,0.252722758433675,15.7831391914855,1.43132487258974,1.60931473103431,4.50155324513373,10.3986324306643,10.2735113718505,12.9394857487698,8.52685693493532,40.6164292060255,0,0.189106080167819,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.492502392237286,0.0810688095458557,0,0,0,39.74480027862,41.6763680136102,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.889512175379481,0,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,2.25415471346161,0.610953983535943,0.387904974335251,0.350679099451593,0.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| ||
|EntrezGene=140580 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BPU7 | |||
|association_with_transcript=-3bp_to_ENSMUST00000110493,uc007ppq.1,uc007ppr.1_5end | |||
|description=CAGE_peak_2_at_Elmo1_5end | |||
|id=chr13:20564933..20564958,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.36e-14!23;CL:0000337!5.36e-14!23;CL:0000540!2.93e-12!33;CL:0000047!2.93e-12!33;CL:0000031!2.93e-12!33;CL:0000404!2.93e-12!33;CL:0000221!7.87e-11!44;CL:0000133!7.87e-11!44;CL:0002319!9.00e-11!43;CL:0000393!4.97e-08!39;CL:0000211!4.97e-08!39;CL:0000055!5.64e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.13e-18,23;CL:0000337,3.13e-18,23;CL:0000540,2.47e-13,33;CL:0000047,2.47e-13,33;CL:0000031,2.47e-13,33;CL:0000404,2.47e-13,33;CL:0002319,6.35e-11,43;CL:0000221,1.94e-10,44;CL:0000133,1.94e-10,44;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.97e-27!75;UBERON:0001016!3.97e-27!75;UBERON:0001017!4.46e-27!73;UBERON:0005743!4.46e-27!73;UBERON:0002346!1.14e-25!71;UBERON:0003075!1.14e-25!71;UBERON:0007284!1.14e-25!71;UBERON:0004121!1.69e-24!102;UBERON:0000924!1.69e-24!102;UBERON:0006601!1.69e-24!102;UBERON:0000033!9.62e-24!63;UBERON:0001049!2.51e-23!52;UBERON:0005068!2.51e-23!52;UBERON:0006241!2.51e-23!52;UBERON:0007135!2.51e-23!52;UBERON:0000955!9.45e-23!50;UBERON:0006238!9.45e-23!50;UBERON:0002616!5.84e-22!49;UBERON:0003056!1.16e-20!49;UBERON:0002020!1.22e-18!34;UBERON:0003080!6.82e-18!40;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0002791!9.29e-16!29;UBERON:0003528!9.29e-16!29;UBERON:0001893!9.29e-16!29;UBERON:0007811!2.63e-11!86;UBERON:0000956!6.31e-11!21;UBERON:0001869!6.31e-11!21;UBERON:0000203!6.31e-11!21;UBERON:0000153!6.30e-10!94;UBERON:0002619!7.30e-09!17;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.10e-33,64;UBERON:0003075,5.10e-33,64;UBERON:0007284,5.10e-33,64;UBERON:0000073,1.68e-30,54;UBERON:0001017,3.14e-30,73;UBERON:0001016,9.19e-30,75;UBERON:0001049,2.99e-28,52;UBERON:0005068,2.99e-28,52;UBERON:0006241,2.99e-28,52;UBERON:0007135,2.99e-28,52;UBERON:0004121,4.08e-28,95;UBERON:0000924,4.08e-28,95;UBERON:0006601,4.08e-28,95;UBERON:0010371,4.31e-27,73;UBERON:0000955,1.60e-24,47;UBERON:0006238,1.60e-24,47;UBERON:0003056,2.11e-24,49;UBERON:0002020,8.29e-24,34;UBERON:0002616,1.62e-23,46;UBERON:0003080,1.14e-20,40;UBERON:0003528,5.94e-20,29;UBERON:0002791,5.94e-20,29;UBERON:0001893,5.94e-20,29;UBERON:0002780,9.58e-20,39;UBERON:0001890,9.58e-20,39;UBERON:0006240,9.58e-20,39;UBERON:0010314,7.49e-18,92;UBERON:0000956,1.65e-13,21;UBERON:0001869,1.65e-13,21;UBERON:0000203,1.65e-13,21;UBERON:0002619,9.27e-11,17;UBERON:0002021,9.95e-10,10;UBERON:0000411,9.95e-10,10;UBERON:0001950,9.95e-10,10;UBERON:0003076,5.13e-08,12;UBERON:0003057,5.13e-08,12;UBERON:0002420,1.05e-07,8;UBERON:0007245,1.05e-07,8;UBERON:0010009,1.05e-07,8;UBERON:0010011,1.05e-07,8;UBERON:0000454,1.05e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.979242459702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.878744730937887,0,0.55994568650145,0,0,0,0,0,0,0,63.9320016316329,65.5948814297321,45.6358610524449,0,0,0,0,0,13.1824048628098,4.61061966385865,36.1876746956587,37.53165085621,32.3900440481128,49.1319693174542,52.3458442055324,60.7554364106172,59.4241920313065,45.041720543891,105.711245759413,156.416989154355,131.794405533857,49.8530167620133,50.4096916249277,45.8403766089949,104.414441626516,60.7783618834214,64.6336588095907,54.8009168981022,64.9214864443909,72.5093844260419,0.37863096666592,1.36028808192214,0,0,0,0,0,0,4.63466586434781,0,0,0,0.704217098883403,0,0,0,0,0,0,2.62622923353838,0,0,0.520455980298408,0.304465478312141,0.461230994512117,1.50722640552623,1.64624189989987,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,117.112318804619,116.033475574654,0.255457055208591,0,0,0,117.136280014571,197.182759814828,129.298328324137,135.582969749976,126.067720463853,200.515462999975,154.615923703573,0.611036183101898,0.124406970610093,0.252722758433675,15.7831391914855,1.43132487258974,1.60931473103431,4.50155324513373,10.3986324306643,10.2735113718505,12.9394857487698,8.52685693493532,40.6164292060255,0,0.189106080167819,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.492502392237286,0.0810688095458557,0,0,0,39.74480027862,41.6763680136102,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.889512175379481,0,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,2.25415471346161,0.610953983535943,0.387904974335251,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,102.591827002199,93.0660791542093,0,0,1.89304931649754,1.17131623288992,1.93881057959519,0,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,164.195192691543,0.425820255624806,1.24645922567079,0,3.13443233647817,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.540183282093931,0.905510786479282,0.214337035031592,1.24138163549592,2.14042581122485,1.64549020602121,1.2178597964584,0.469343416127421,0,1.32317038832977,0.16488625294148,1.13025098687134,0.422190474497091,0,0,0.291480836629851,50.2502568448481,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0.138199973804424,2.86401185404534,0.316335993581135,0.813277868507395,0.324016022465404,0.627264888043406,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.821687657318618,0,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0.214368379079066,0,91.4897985039648,87.9221201728708,83.0698494487125,73.3813088607546,89.0607275701835,93.6688432763229,101.253375034771,107.176446367364,115.098171881988,101.998781415109,9.96358536808096,20.3502685434526,18.2684958156924,11.1829089851415,13.6248555708189,13.604419625301,12.0013233012872,12.9802086060503,14.1204452220399,13.1402550117175,15.7157165931949,11.6948331659367,13.2034525532534,13.2532065478079,12.17631941859,10.9547548995107,8.11190281613988,10.4170979050401,7.00546031365621,9.42073088860143,12.343293085875,11.0034999818789,12.8755542571553,12.7904846636449,13.3635320189769,11.3383574574847,10.9756783723664,16.0472523977084,7.74083448921412,10.1005608898393,11.5075967580449,8.86540341380071,9.41231399290286,11.4653262477615,6.55882477335881,28.4784058849258,9.59119594626174,8.37997110788363,5.35607329792761,2.20591419119516,2.78241402744506 | |||
|short_description=p2@Elmo1 | |||
}} |
Revision as of 00:06, 13 September 2013
Short description: | p2@Elmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Elmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -3bp_to_ENSMUST00000110493, uc007ppq.1, uc007ppr.1_5end |
EntrezGene: | Elmo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.13e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.13e-18 | 23 |
neuron | 2.47e-13 | 33 |
neuronal stem cell | 2.47e-13 | 33 |
neuroblast | 2.47e-13 | 33 |
electrically signaling cell | 2.47e-13 | 33 |
neural cell | 6.35e-11 | 43 |
ectodermal cell | 1.94e-10 | 44 |
neurectodermal cell | 1.94e-10 | 44 |
electrically responsive cell | 8.43e-10 | 39 |
electrically active cell | 8.43e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.