FFCP PHASE1:Mm9::chr13:29043435..29043446,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=667|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:29043435..29043446,+|id=chr13:29043435..29043446,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,7.81e-25,3;CL:0002202,7.81e-25,3;CL:0000069,7.81e-25,3;CL:0002632,7.81e-25,3;CL:0002368,7.81e-25,3;CL:0000307,7.81e-25,3;CL:0000377,7.81e-25,3;CL:0002609,5.03e-22,6;CL:0000117,2.19e-12,23;CL:0000337,2.19e-12,23;CL:0002679,3.65e-09,1;CL:0002321,1.12e-08,70;CL:0000540,1.42e-08,33;CL:0000047,1.42e-08,33;CL:0000031,1.42e-08,33;CL:0000404,1.42e-08,33;CL:0000393,3.22e-07,39;CL:0000211,3.22e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.81e-25,3;UBERON:0001005,7.81e-25,3;UBERON:0007196,7.81e-25,3;UBERON:0001558,7.81e-25,3;UBERON:0002020,2.42e-08,34;UBERON:0003528,4.95e-07,29;UBERON:0002791,4.95e-07,29;UBERON:0001893,4.95e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.917733760808408,0,0,0,0,0,0,0,0,0,0.771778308107841,0,0.515672092277442,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.07379224616955,4.18518408828241,2.10324961351382,0,0,0.734944795289724,0.0958454710182364,1.83843757322004,0,0,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0.30559649555362,1.17851434189467,0.284743361598206,0.372798891650601,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,3.030874574157,4.30711771307668,1.01104889002957,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,1.38219787324151,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.0680364991513279,0.12811372028485,0.655912071918102,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0.804820204198858,0.116765342367169,0,0.656669856316381,0,0.146199987425332,0,0.134206418760372,0,0,0,0,1.2797295032114,0.232236671860439,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.509235257325564,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0.327869890753351,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.900305470156551,0.388076051348264,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0.358117032009409,0,0,0,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0.165458490457098,0,0.387479470433193,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0,0.480781798079875,0.147689527174577,0,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.726511433089237,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p@chr13:29043435..29043446,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=667 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:29043435..29043446,+ | |||
|id=chr13:29043435..29043446,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.81e-25,3;CL:0002202,7.81e-25,3;CL:0000069,7.81e-25,3;CL:0002632,7.81e-25,3;CL:0002368,7.81e-25,3;CL:0000307,7.81e-25,3;CL:0000377,7.81e-25,3;CL:0002609,5.03e-22,6;CL:0000117,2.19e-12,23;CL:0000337,2.19e-12,23;CL:0002679,3.65e-09,1;CL:0002321,1.12e-08,70;CL:0000540,1.42e-08,33;CL:0000047,1.42e-08,33;CL:0000031,1.42e-08,33;CL:0000404,1.42e-08,33;CL:0000393,3.22e-07,39;CL:0000211,3.22e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.81e-25,3;UBERON:0001005,7.81e-25,3;UBERON:0007196,7.81e-25,3;UBERON:0001558,7.81e-25,3;UBERON:0002020,2.42e-08,34;UBERON:0003528,4.95e-07,29;UBERON:0002791,4.95e-07,29;UBERON:0001893,4.95e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.917733760808408,0,0,0,0,0,0,0,0,0,0.771778308107841,0,0.515672092277442,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.07379224616955,4.18518408828241,2.10324961351382,0,0,0.734944795289724,0.0958454710182364,1.83843757322004,0,0,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0.30559649555362,1.17851434189467,0.284743361598206,0.372798891650601,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,3.030874574157,4.30711771307668,1.01104889002957,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,1.38219787324151,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.0680364991513279,0.12811372028485,0.655912071918102,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0.804820204198858,0.116765342367169,0,0.656669856316381,0,0.146199987425332,0,0.134206418760372,0,0,0,0,1.2797295032114,0.232236671860439,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.509235257325564,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0.327869890753351,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.900305470156551,0.388076051348264,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0.358117032009409,0,0,0,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0.165458490457098,0,0.387479470433193,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0,0.480781798079875,0.147689527174577,0,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.726511433089237,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr13:29043435..29043446,+ | |||
}} |
Revision as of 00:18, 13 September 2013
Short description: | p@chr13:29043435..29043446, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:29043435..29043446, + |
Coexpression cluster: | MCL_coexpression_mm9:667 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.81e-25 | 3 |
epithelial cell of tracheobronchial tree | 7.81e-25 | 3 |
branched duct epithelial cell | 7.81e-25 | 3 |
epithelial cell of lower respiratory tract | 7.81e-25 | 3 |
respiratory epithelial cell | 7.81e-25 | 3 |
tracheal epithelial cell | 7.81e-25 | 3 |
tracheoblast | 7.81e-25 | 3 |
neuron of cerebral cortex | 5.03e-22 | 6 |
CNS neuron (sensu Vertebrata) | 2.19e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.19e-12 | 23 |
natural helper lymphocyte | 3.65e-09 | 1 |
embryonic cell | 1.12e-08 | 70 |
neuron | 1.42e-08 | 33 |
neuronal stem cell | 1.42e-08 | 33 |
neuroblast | 1.42e-08 | 33 |
electrically signaling cell | 1.42e-08 | 33 |
electrically responsive cell | 3.22e-07 | 39 |
electrically active cell | 3.22e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.81e-25 | 3 |
respiratory airway | 7.81e-25 | 3 |
tracheobronchial tree | 7.81e-25 | 3 |
lower respiratory tract | 7.81e-25 | 3 |
gray matter | 2.42e-08 | 34 |
brain grey matter | 4.95e-07 | 29 |
regional part of telencephalon | 4.95e-07 | 29 |
telencephalon | 4.95e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.