FFCP PHASE1:Mm9::chr6:21257870..21257877,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:21257870..21257877,+|id=chr6:21257870..21257877,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.09e-14!50;UBERON:0006238!1.09e-14!50;UBERON:0002616!1.65e-13!49;UBERON:0000033!1.49e-11!63;UBERON:0001049!4.28e-11!52;UBERON:0005068!4.28e-11!52;UBERON:0006241!4.28e-11!52;UBERON:0007135!4.28e-11!52;UBERON:0003080!2.34e-09!40;UBERON:0001017!2.85e-09!73;UBERON:0005743!2.85e-09!73;UBERON:0000073!7.22e-09!75;UBERON:0001016!7.22e-09!75;UBERON:0002346!1.67e-08!71;UBERON:0003075!1.67e-08!71;UBERON:0007284!1.67e-08!71;UBERON:0002780!2.41e-08!39;UBERON:0001890!2.41e-08!39;UBERON:0006240!2.41e-08!39;UBERON:0002298!3.18e-08!6;UBERON:0002950!3.46e-08!4;UBERON:0001891!3.46e-08!4;UBERON:0009616!3.46e-08!4;UBERON:0003056!6.90e-08!49;UBERON:0007811!6.53e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.43e-18,4;UBERON:0002680,1.43e-18,4;UBERON:0001895,1.43e-18,4;UBERON:0010092,1.43e-18,4;UBERON:0006215,1.43e-18,4;UBERON:0004733,9.45e-13,6;UBERON:0004732,9.45e-13,6;UBERON:0002028,9.45e-13,6;UBERON:0007277,9.45e-13,6;UBERON:0000073,1.10e-08,54;UBERON:0002021,5.99e-08,10;UBERON:0000411,5.99e-08,10;UBERON:0001950,5.99e-08,10;UBERON:0004684,4.77e-07,3;UBERON:0002275,4.77e-07,3;UBERON:0003076,7.23e-07,12;UBERON:0003057,7.23e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,4.81727425670947,0,0,0,0,0.299581278809645,0.457500602818626,0,0.521472960576829,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.859265911718438,0,1.5107877947794,0,0.900642406448441,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr6:21257870..21257877,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:21257870..21257877,+ | |||
|id=chr6:21257870..21257877,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.09e-14!50;UBERON:0006238!1.09e-14!50;UBERON:0002616!1.65e-13!49;UBERON:0000033!1.49e-11!63;UBERON:0001049!4.28e-11!52;UBERON:0005068!4.28e-11!52;UBERON:0006241!4.28e-11!52;UBERON:0007135!4.28e-11!52;UBERON:0003080!2.34e-09!40;UBERON:0001017!2.85e-09!73;UBERON:0005743!2.85e-09!73;UBERON:0000073!7.22e-09!75;UBERON:0001016!7.22e-09!75;UBERON:0002346!1.67e-08!71;UBERON:0003075!1.67e-08!71;UBERON:0007284!1.67e-08!71;UBERON:0002780!2.41e-08!39;UBERON:0001890!2.41e-08!39;UBERON:0006240!2.41e-08!39;UBERON:0002298!3.18e-08!6;UBERON:0002950!3.46e-08!4;UBERON:0001891!3.46e-08!4;UBERON:0009616!3.46e-08!4;UBERON:0003056!6.90e-08!49;UBERON:0007811!6.53e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.43e-18,4;UBERON:0002680,1.43e-18,4;UBERON:0001895,1.43e-18,4;UBERON:0010092,1.43e-18,4;UBERON:0006215,1.43e-18,4;UBERON:0004733,9.45e-13,6;UBERON:0004732,9.45e-13,6;UBERON:0002028,9.45e-13,6;UBERON:0007277,9.45e-13,6;UBERON:0000073,1.10e-08,54;UBERON:0002021,5.99e-08,10;UBERON:0000411,5.99e-08,10;UBERON:0001950,5.99e-08,10;UBERON:0004684,4.77e-07,3;UBERON:0002275,4.77e-07,3;UBERON:0003076,7.23e-07,12;UBERON:0003057,7.23e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,4.81727425670947,0,0,0,0,0.299581278809645,0.457500602818626,0,0.521472960576829,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.859265911718438,0,1.5107877947794,0,0.900642406448441,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:21257870..21257877,+ | |||
}} |
Revision as of 09:29, 14 September 2013
Short description: | p@chr6:21257870..21257877, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:21257870..21257877, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.43e-18 | 4 |
regional part of metencephalon | 1.43e-18 | 4 |
metencephalon | 1.43e-18 | 4 |
future metencephalon | 1.43e-18 | 4 |
rhombic lip | 1.43e-18 | 4 |
segmental subdivision of hindbrain | 9.45e-13 | 6 |
segmental subdivision of nervous system | 9.45e-13 | 6 |
hindbrain | 9.45e-13 | 6 |
presumptive hindbrain | 9.45e-13 | 6 |
regional part of nervous system | 1.10e-08 | 54 |
occipital lobe | 5.99e-08 | 10 |
visual cortex | 5.99e-08 | 10 |
neocortex | 5.99e-08 | 10 |
raphe nuclei | 4.77e-07 | 3 |
reticular formation | 4.77e-07 | 3 |
posterior neural tube | 7.23e-07 | 12 |
chordal neural plate | 7.23e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.