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FFCP PHASE1:Mm9::chr9:65142202..65142224,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=270166|HGNC=|MCL_coexpression_id=2227|UniProt=|association_with_transcript=63bp_to_ENSMUST00000148632_5end|description=CAGE_peak_2_at_Clpx_5end|id=chr9:65142202..65142224,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.51e-08,5;CL:0000066,1.08e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.27e-11!25;UBERON:0002330!2.27e-11!25;UBERON:0002107!3.53e-11!22;UBERON:0007499!3.53e-11!22;UBERON:0006925!3.53e-11!22;UBERON:0009497!3.53e-11!22;UBERON:0000015!3.53e-11!22;UBERON:0002423!3.53e-11!22;UBERON:0006235!3.53e-11!22;UBERON:0008835!3.53e-11!22;UBERON:0003894!3.53e-11!22;UBERON:0004161!3.53e-11!22;UBERON:0008836!3.53e-11!22;UBERON:0009854!4.59e-10!23;UBERON:0009856!4.59e-10!23;UBERON:0005172!6.40e-09!49;UBERON:0005173!6.40e-09!49;UBERON:0002417!6.40e-09!49;UBERON:0000916!6.40e-09!49;UBERON:0009569!5.08e-08!66;UBERON:0003914!5.57e-08!47;UBERON:0000466!4.24e-07!79;UBERON:0005177!4.99e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.63e-15,22;UBERON:0007499,1.63e-15,22;UBERON:0006925,1.63e-15,22;UBERON:0009497,1.63e-15,22;UBERON:0000015,1.63e-15,22;UBERON:0002423,1.63e-15,22;UBERON:0006235,1.63e-15,22;UBERON:0008835,1.63e-15,22;UBERON:0003894,1.63e-15,22;UBERON:0004161,1.63e-15,22;UBERON:0008836,1.63e-15,22;UBERON:0002365,7.68e-15,25;UBERON:0002330,7.68e-15,25;UBERON:0009854,1.26e-14,23;UBERON:0009856,1.26e-14,23;UBERON:0005172,4.68e-10,49;UBERON:0005173,4.68e-10,49;UBERON:0002417,4.68e-10,49;UBERON:0000916,4.68e-10,49;UBERON:0003104,1.91e-08,61;UBERON:0009142,1.91e-08,61;UBERON:0003929,2.74e-07,55;UBERON:0003914,3.78e-07,47|phase1_expression=0.160148847104794,4.18770489167233,6.3699893514535,1.51232105653415,1.50268718983904,1.17515490338323,0.700837921786577,0,0.703943610758334,0.936258105287974,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,1.27564935226605,0,0,2.3998863419011,3.67054849707472,4.59385571292016,3.87685796543167,3.01659725760245,0.760093677825496,0.756090389279792,1.99557459589774,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,1.02903774414379,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.103689612308478,0.405017814995072,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,1.83843757322004,0,0.127687338085188,0.307213066512487,0.263772575460388,0.274462930807229,0,0,0,0.45839474333043,0,0.711858403995515,0.186399445825301,0.302904773332736,0.226714680320357,4.05810284182349,6.88339101585109,3.39985666853875,5.93673510801599,1.94932925234301,2.68816132258401,1.12355536105401,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,2.62622923353838,0.517875767294343,0,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,2.47194967734374,0.289198713839823,1.76922110389975,0.808834249737046,1.10420759230197,0.969750506270444,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0,0.648965052271031,0.509196819251581,0.746441823660558,0,0.420883711772948,0.260240885925407,1.14951052216736,1.0803727788321,0.452114453507145,1.02054748726992,0.12811372028485,1.21812241927647,0.776110112217047,0.215567992932842,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0,0.268273401399619,1.05088808130453,0.329119699826961,0.656669856316381,0.972825714550269,0.877199924551994,0.658650345873152,2.01309628140558,0.210289948564127,0.102904612379284,0.660837565967596,0.793351699990633,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0.969762435838129,1.82353131714828,1.64414996523069,2.80459281161244,4.23896565171712,12.5865107200237,1.48226313543574,0.166845105716094,0.786235980452812,0.674586337154561,0.811440485554012,0.482354319504834,0.763877555344259,2.01387296215567,3.89124544260085,2.74561413188081,5.75072826109418,3.72140947668503,4.36852742360385,2.77836765741823,3.58794827043824,13.9908621195376,0.923765950833023,0.757965647081939,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,0.952174563544055,0.195133647857799,0.315270288212382,0.221464689648775,0,0.491589944147214,0,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,0,0.234423373184406,0.163934945376675,5.55436039849621,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,1.18586333383957,0.321321316421807,0.141940085208269,0,0.325773918707152,0,0,0.971122544619926,0,0.943025398779491,0,0.307435147943927,1.55056975900933,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0.532020700926821,0.713475270408282,0.493647061806363,0,1.17335854031855,0.42366414172764,0,0.16488625294148,0.645857706783622,0.603129249281559,0.477489376012546,0,0.291480836629851,0,0.170870880797853,0.619160603889667,1.11116716421827,0.188368457004691,0.136694227721025,0.686334519619568,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0.129614973291793,1.86401793926078,2.25477175473676,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.58678619322877,0.13020438484395,0,2.41584120826006,2.88030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.295379054349154,0,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0.350630706544707,1.58711268530648,0,0.179427713218951,0,0.579568782096571,0.187682475451182,0,0.643105137237198,0.501572104035363,1.6942555278512,0,1.14579102687879,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,0,0.919217542250071,0.44449345560323,1.03017528619447,0,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.320125762024346,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,1.24233064311536,0.715308569841963,0.436039249896986,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,1.68342681497322,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.859484216193193,2.67803664896381,1.32354851471709,2.55054619182464|short_description=p2@Clpx}}
|EntrezGene=270166
|HGNC=
|MCL_coexpression_id=2227
|UniProt=
|association_with_transcript=63bp_to_ENSMUST00000148632_5end
|description=CAGE_peak_2_at_Clpx_5end
|id=chr9:65142202..65142224,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,3.51e-08,5;CL:0000066,1.08e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!2.27e-11!25;UBERON:0002330!2.27e-11!25;UBERON:0002107!3.53e-11!22;UBERON:0007499!3.53e-11!22;UBERON:0006925!3.53e-11!22;UBERON:0009497!3.53e-11!22;UBERON:0000015!3.53e-11!22;UBERON:0002423!3.53e-11!22;UBERON:0006235!3.53e-11!22;UBERON:0008835!3.53e-11!22;UBERON:0003894!3.53e-11!22;UBERON:0004161!3.53e-11!22;UBERON:0008836!3.53e-11!22;UBERON:0009854!4.59e-10!23;UBERON:0009856!4.59e-10!23;UBERON:0005172!6.40e-09!49;UBERON:0005173!6.40e-09!49;UBERON:0002417!6.40e-09!49;UBERON:0000916!6.40e-09!49;UBERON:0009569!5.08e-08!66;UBERON:0003914!5.57e-08!47;UBERON:0000466!4.24e-07!79;UBERON:0005177!4.99e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.63e-15,22;UBERON:0007499,1.63e-15,22;UBERON:0006925,1.63e-15,22;UBERON:0009497,1.63e-15,22;UBERON:0000015,1.63e-15,22;UBERON:0002423,1.63e-15,22;UBERON:0006235,1.63e-15,22;UBERON:0008835,1.63e-15,22;UBERON:0003894,1.63e-15,22;UBERON:0004161,1.63e-15,22;UBERON:0008836,1.63e-15,22;UBERON:0002365,7.68e-15,25;UBERON:0002330,7.68e-15,25;UBERON:0009854,1.26e-14,23;UBERON:0009856,1.26e-14,23;UBERON:0005172,4.68e-10,49;UBERON:0005173,4.68e-10,49;UBERON:0002417,4.68e-10,49;UBERON:0000916,4.68e-10,49;UBERON:0003104,1.91e-08,61;UBERON:0009142,1.91e-08,61;UBERON:0003929,2.74e-07,55;UBERON:0003914,3.78e-07,47
|phase1_expression=0.160148847104794,4.18770489167233,6.3699893514535,1.51232105653415,1.50268718983904,1.17515490338323,0.700837921786577,0,0.703943610758334,0.936258105287974,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,1.27564935226605,0,0,2.3998863419011,3.67054849707472,4.59385571292016,3.87685796543167,3.01659725760245,0.760093677825496,0.756090389279792,1.99557459589774,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,1.02903774414379,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.103689612308478,0.405017814995072,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,1.83843757322004,0,0.127687338085188,0.307213066512487,0.263772575460388,0.274462930807229,0,0,0,0.45839474333043,0,0.711858403995515,0.186399445825301,0.302904773332736,0.226714680320357,4.05810284182349,6.88339101585109,3.39985666853875,5.93673510801599,1.94932925234301,2.68816132258401,1.12355536105401,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,2.62622923353838,0.517875767294343,0,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,2.47194967734374,0.289198713839823,1.76922110389975,0.808834249737046,1.10420759230197,0.969750506270444,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0,0.648965052271031,0.509196819251581,0.746441823660558,0,0.420883711772948,0.260240885925407,1.14951052216736,1.0803727788321,0.452114453507145,1.02054748726992,0.12811372028485,1.21812241927647,0.776110112217047,0.215567992932842,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0,0.268273401399619,1.05088808130453,0.329119699826961,0.656669856316381,0.972825714550269,0.877199924551994,0.658650345873152,2.01309628140558,0.210289948564127,0.102904612379284,0.660837565967596,0.793351699990633,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0.969762435838129,1.82353131714828,1.64414996523069,2.80459281161244,4.23896565171712,12.5865107200237,1.48226313543574,0.166845105716094,0.786235980452812,0.674586337154561,0.811440485554012,0.482354319504834,0.763877555344259,2.01387296215567,3.89124544260085,2.74561413188081,5.75072826109418,3.72140947668503,4.36852742360385,2.77836765741823,3.58794827043824,13.9908621195376,0.923765950833023,0.757965647081939,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,0.952174563544055,0.195133647857799,0.315270288212382,0.221464689648775,0,0.491589944147214,0,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,0,0.234423373184406,0.163934945376675,5.55436039849621,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,1.18586333383957,0.321321316421807,0.141940085208269,0,0.325773918707152,0,0,0.971122544619926,0,0.943025398779491,0,0.307435147943927,1.55056975900933,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0.532020700926821,0.713475270408282,0.493647061806363,0,1.17335854031855,0.42366414172764,0,0.16488625294148,0.645857706783622,0.603129249281559,0.477489376012546,0,0.291480836629851,0,0.170870880797853,0.619160603889667,1.11116716421827,0.188368457004691,0.136694227721025,0.686334519619568,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0.129614973291793,1.86401793926078,2.25477175473676,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.58678619322877,0.13020438484395,0,2.41584120826006,2.88030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.295379054349154,0,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0.350630706544707,1.58711268530648,0,0.179427713218951,0,0.579568782096571,0.187682475451182,0,0.643105137237198,0.501572104035363,1.6942555278512,0,1.14579102687879,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,0,0.919217542250071,0.44449345560323,1.03017528619447,0,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.320125762024346,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,1.24233064311536,0.715308569841963,0.436039249896986,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,1.68342681497322,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.859484216193193,2.67803664896381,1.32354851471709,2.55054619182464
|short_description=p2@Clpx
}}

Revision as of 18:32, 14 September 2013

Short description:p2@Clpx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clpx_5end
Coexpression cluster:MCL_coexpression_mm9:2227
Association with transcript: 63bp_to_ENSMUST00000148632_5end
EntrezGene:Clpx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clpx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H112.59
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte3.51e-085
epithelial cell1.08e-0725

Uber anatomy
Ontology termp-valuen
liver1.63e-1522
epithelial sac1.63e-1522
digestive gland1.63e-1522
epithelium of foregut-midgut junction1.63e-1522
anatomical boundary1.63e-1522
hepatobiliary system1.63e-1522
foregut-midgut junction1.63e-1522
hepatic diverticulum1.63e-1522
liver primordium1.63e-1522
septum transversum1.63e-1522
liver bud1.63e-1522
exocrine gland7.68e-1525
exocrine system7.68e-1525
digestive tract diverticulum1.26e-1423
sac1.26e-1423
abdomen element4.68e-1049
abdominal segment element4.68e-1049
abdominal segment of trunk4.68e-1049
abdomen4.68e-1049
mesenchyme1.91e-0861
entire embryonic mesenchyme1.91e-0861
gut epithelium2.74e-0755
epithelial tube3.78e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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