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FFCP PHASE1:Mm9::chr9:37209548..37209565,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74144|HGNC=|MCL_coexpression_id=26|UniProt=Q6IR38|association_with_transcript=-49bp_to_ENSMUST00000163262_5end|description=CAGE_peak_2_at_Robo4_5end|id=chr9:37209548..37209565,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.26e-14!85;UBERON:0009569!1.80e-13!66;UBERON:0005172!1.63e-09!49;UBERON:0005173!1.63e-09!49;UBERON:0002417!1.63e-09!49;UBERON:0000916!1.63e-09!49;UBERON:0000466!2.51e-09!79;UBERON:0002100!2.72e-09!98;UBERON:0000926!9.53e-09!193;UBERON:0004120!9.53e-09!193;UBERON:0006603!9.53e-09!193;UBERON:0005157!8.50e-08!27;UBERON:0002048!1.49e-07!14;UBERON:0000117!1.49e-07!14;UBERON:0000171!1.49e-07!14;UBERON:0000170!1.49e-07!14;UBERON:0005597!1.49e-07!14;UBERON:0000118!1.49e-07!14;UBERON:0005153!2.74e-07!17;UBERON:0003104!5.55e-07!131;UBERON:0009142!5.55e-07!131;UBERON:0000464!6.84e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.29e-17,79;UBERON:0009569,3.86e-13,66;UBERON:0002100,2.72e-12,90;UBERON:0005172,6.67e-09,49;UBERON:0005173,6.67e-09,49;UBERON:0002417,6.67e-09,49;UBERON:0000916,6.67e-09,49;UBERON:0002048,1.57e-07,14;UBERON:0000117,1.57e-07,14;UBERON:0000171,1.57e-07,14;UBERON:0000170,1.57e-07,14;UBERON:0005597,1.57e-07,14;UBERON:0000118,1.57e-07,14;UBERON:0005153,4.06e-07,17|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.302286240427142,82.9012437686798,15.487629785665,0,0.539703191637817,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.2836775943812,5.17875767294343,5.19547486726887,5.03107447621794,4.56698217468212,3.92046345335299,6.33035090321015,4.58595957829249,4.39833069653864,4.20231445148436,5.20557684911682,2.65383165584962,4.20593809863264,3.5334642953663,1.93950101254089,0,0.292780797011547,0.41889341362691,2.04365644166873,0.718890747035522,0,0.381210681219194,0.299581278809645,0.915001205637253,0.376963056338593,0.347648640384553,0.255715457330331,0.20778804455956,0.648965052271031,3.05518091550949,4.35424397135326,1.0108910337347,0.841767423545896,1.30120442962704,0.689706313300419,1.26043490863744,1.9591626318643,1.15662048557257,0.640568601424249,0.749613796477831,1.55222022443409,0.862271971731369,1.32374256117473,1.93546236580344,1.53437012699302,2.78047249225598,3.1342694986995,2.46938563689532,1.79130840136644,0,0,0,0.621377317606506,1.17263029990548,1.44049649168812,2.3674473558521,2.36117078096885,1.3884040159864,3.72054311600653,4.02410102099429,3.03589890154641,4.60767579757745,6.7308660272429,7.94474333549386,5.4093995347373,9.44065495751518,5.2340503316545,0.420579897128254,0.102904612379284,0,1.58670339998127,1.06644125267617,3.0190767341857,2.19074684247559,2.8235693447268,2.89091456998331,2.85338439168839,2.84717436926707,3.62337700392824,4.77536896720512,3.97912944082302,3.50935356814416,5.39291645192533,2.16138049874694,1.1948476395262,3.41402221715547,3.31320686568214,4.50830942692322,3.25842124552503,5.81857461502877,4.69909993265134,6.13394410105296,5.60918562322488,5.80895293013087,5.42947521255922,3.55743152504579,2.16898637430922,3.73462090715086,1.12431056192427,1.82574109249653,1.68824011826692,1.52775511068852,2.30156909960649,5.83686816390127,1.64736847912849,2.87536413054709,4.83783231969054,2.49630138491648,3.53610429125956,3.58794827043824,3.37710464954357,4.80358294433172,0.947457058852424,2.93336957595647,4.07388205860452,6.57132695207806,6.365237782789,6.42717830392237,5.46374214001837,4.41378403497335,3.98636441367795,6.69710028361446,6.55453258862952,5.18054945597687,7.37710198765709,0,0,4.42587845717133,2.75936746304733,0.80275294993896,0.117211686592203,0,4.29200576247434,0,0,0,0,0,0,0,0,0,0,2.83880170416537,3.5613120733451,2.76907830901079,3.62934270539578,3.98235415019888,3.64170954232472,4.53485335447127,3.39489143560617,5.02013217897314,4.30409207121498,6.20227903603731,6.90714086007261,6.06045543254026,2.52829406348653,1.05418608574999,1.03135543248187,2.04263763452273,1.8006109403131,2.32845630808958,2.57204442037911,2.6601035046341,2.85390108163313,2.46823530903181,6.69822888052118,2.58138878870081,1.90648863777438,0.220528398054962,1.15420377059036,0.968786560175433,1.86970067277283,2.626191568069,0.820704498725306,4.08073171281791,0.556275906031529,1.53783792718067,1.65109494370578,3.51869602002452,0.753473828018764,1.23024804948923,0.915112692826091,3.73952545986482,5.73800954526998,4.00779924032829,2.86401185404534,3.32152793260192,2.43983360552218,1.40406943068342,2.29997125615916,1.31017538247707,1.61837215661785,2.14898984885873,1.83229159388821,1.55537967950151,1.24267862617385,0,2.0932316446157,1.48912641411388,3.30567020184881,2.84151611651008,1.85851738039856,2.11243029562357,1.17183946359555,0.838874755405687,0.483168241652012,0.864090018773596,0,2.02725215290164,1.54066435747241,0.51968329191118,1.07416017400489,0.198681354781265,0.721172697119813,0.147689527174577,0.807731599585181,0.685861259894999,0.504130925684203,0.0974578807397524,0.384847366561318,0,2.49403421976732,0.665957860122194,1.79427713218951,0.503653849092235,2.89784391048286,2.43987218086537,1.46521299413812,1.07184189539533,1.00314420807073,0,0,0,0.343706364687375,0,0,0,0,0,0,0.415149390336707,1.99512436700516,1.02440163452481,2.67417388775123,0.838452650511929,0.919217542250071,4.66718128383392,2.47242068686673,3.53011130550997,2.77966932940177,3.29523089857312,3.2066478035633,3.183811253976,3.39333307745807,3.33125719942557,5.23923060411381,3.01299247456624,6.17309505483856,3.29668720642645,2.79677948255355,5.82877729055206,4.08194354166476,3.57654284920981,3.34296758254356,3.19971893412124,3.21535509988371,2.19513567447327,3.41990624869196,2.8518863907631,2.24456908663095,2.96587545310435,3.54616136552028,0.409231043169689,2.32405261778949,2.50778594275484,1.24905288968973,2.57324769289949,2.14871054048298,3.44318997723918,3.52946270591225,3.94175320554716|short_description=p2@Robo4}}
|EntrezGene=74144
|HGNC=
|MCL_coexpression_id=26
|UniProt=Q6IR38
|association_with_transcript=-49bp_to_ENSMUST00000163262_5end
|description=CAGE_peak_2_at_Robo4_5end
|id=chr9:37209548..37209565,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!1.26e-14!85;UBERON:0009569!1.80e-13!66;UBERON:0005172!1.63e-09!49;UBERON:0005173!1.63e-09!49;UBERON:0002417!1.63e-09!49;UBERON:0000916!1.63e-09!49;UBERON:0000466!2.51e-09!79;UBERON:0002100!2.72e-09!98;UBERON:0000926!9.53e-09!193;UBERON:0004120!9.53e-09!193;UBERON:0006603!9.53e-09!193;UBERON:0005157!8.50e-08!27;UBERON:0002048!1.49e-07!14;UBERON:0000117!1.49e-07!14;UBERON:0000171!1.49e-07!14;UBERON:0000170!1.49e-07!14;UBERON:0005597!1.49e-07!14;UBERON:0000118!1.49e-07!14;UBERON:0005153!2.74e-07!17;UBERON:0003104!5.55e-07!131;UBERON:0009142!5.55e-07!131;UBERON:0000464!6.84e-07!57
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.29e-17,79;UBERON:0009569,3.86e-13,66;UBERON:0002100,2.72e-12,90;UBERON:0005172,6.67e-09,49;UBERON:0005173,6.67e-09,49;UBERON:0002417,6.67e-09,49;UBERON:0000916,6.67e-09,49;UBERON:0002048,1.57e-07,14;UBERON:0000117,1.57e-07,14;UBERON:0000171,1.57e-07,14;UBERON:0000170,1.57e-07,14;UBERON:0005597,1.57e-07,14;UBERON:0000118,1.57e-07,14;UBERON:0005153,4.06e-07,17
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.302286240427142,82.9012437686798,15.487629785665,0,0.539703191637817,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.2836775943812,5.17875767294343,5.19547486726887,5.03107447621794,4.56698217468212,3.92046345335299,6.33035090321015,4.58595957829249,4.39833069653864,4.20231445148436,5.20557684911682,2.65383165584962,4.20593809863264,3.5334642953663,1.93950101254089,0,0.292780797011547,0.41889341362691,2.04365644166873,0.718890747035522,0,0.381210681219194,0.299581278809645,0.915001205637253,0.376963056338593,0.347648640384553,0.255715457330331,0.20778804455956,0.648965052271031,3.05518091550949,4.35424397135326,1.0108910337347,0.841767423545896,1.30120442962704,0.689706313300419,1.26043490863744,1.9591626318643,1.15662048557257,0.640568601424249,0.749613796477831,1.55222022443409,0.862271971731369,1.32374256117473,1.93546236580344,1.53437012699302,2.78047249225598,3.1342694986995,2.46938563689532,1.79130840136644,0,0,0,0.621377317606506,1.17263029990548,1.44049649168812,2.3674473558521,2.36117078096885,1.3884040159864,3.72054311600653,4.02410102099429,3.03589890154641,4.60767579757745,6.7308660272429,7.94474333549386,5.4093995347373,9.44065495751518,5.2340503316545,0.420579897128254,0.102904612379284,0,1.58670339998127,1.06644125267617,3.0190767341857,2.19074684247559,2.8235693447268,2.89091456998331,2.85338439168839,2.84717436926707,3.62337700392824,4.77536896720512,3.97912944082302,3.50935356814416,5.39291645192533,2.16138049874694,1.1948476395262,3.41402221715547,3.31320686568214,4.50830942692322,3.25842124552503,5.81857461502877,4.69909993265134,6.13394410105296,5.60918562322488,5.80895293013087,5.42947521255922,3.55743152504579,2.16898637430922,3.73462090715086,1.12431056192427,1.82574109249653,1.68824011826692,1.52775511068852,2.30156909960649,5.83686816390127,1.64736847912849,2.87536413054709,4.83783231969054,2.49630138491648,3.53610429125956,3.58794827043824,3.37710464954357,4.80358294433172,0.947457058852424,2.93336957595647,4.07388205860452,6.57132695207806,6.365237782789,6.42717830392237,5.46374214001837,4.41378403497335,3.98636441367795,6.69710028361446,6.55453258862952,5.18054945597687,7.37710198765709,0,0,4.42587845717133,2.75936746304733,0.80275294993896,0.117211686592203,0,4.29200576247434,0,0,0,0,0,0,0,0,0,0,2.83880170416537,3.5613120733451,2.76907830901079,3.62934270539578,3.98235415019888,3.64170954232472,4.53485335447127,3.39489143560617,5.02013217897314,4.30409207121498,6.20227903603731,6.90714086007261,6.06045543254026,2.52829406348653,1.05418608574999,1.03135543248187,2.04263763452273,1.8006109403131,2.32845630808958,2.57204442037911,2.6601035046341,2.85390108163313,2.46823530903181,6.69822888052118,2.58138878870081,1.90648863777438,0.220528398054962,1.15420377059036,0.968786560175433,1.86970067277283,2.626191568069,0.820704498725306,4.08073171281791,0.556275906031529,1.53783792718067,1.65109494370578,3.51869602002452,0.753473828018764,1.23024804948923,0.915112692826091,3.73952545986482,5.73800954526998,4.00779924032829,2.86401185404534,3.32152793260192,2.43983360552218,1.40406943068342,2.29997125615916,1.31017538247707,1.61837215661785,2.14898984885873,1.83229159388821,1.55537967950151,1.24267862617385,0,2.0932316446157,1.48912641411388,3.30567020184881,2.84151611651008,1.85851738039856,2.11243029562357,1.17183946359555,0.838874755405687,0.483168241652012,0.864090018773596,0,2.02725215290164,1.54066435747241,0.51968329191118,1.07416017400489,0.198681354781265,0.721172697119813,0.147689527174577,0.807731599585181,0.685861259894999,0.504130925684203,0.0974578807397524,0.384847366561318,0,2.49403421976732,0.665957860122194,1.79427713218951,0.503653849092235,2.89784391048286,2.43987218086537,1.46521299413812,1.07184189539533,1.00314420807073,0,0,0,0.343706364687375,0,0,0,0,0,0,0.415149390336707,1.99512436700516,1.02440163452481,2.67417388775123,0.838452650511929,0.919217542250071,4.66718128383392,2.47242068686673,3.53011130550997,2.77966932940177,3.29523089857312,3.2066478035633,3.183811253976,3.39333307745807,3.33125719942557,5.23923060411381,3.01299247456624,6.17309505483856,3.29668720642645,2.79677948255355,5.82877729055206,4.08194354166476,3.57654284920981,3.34296758254356,3.19971893412124,3.21535509988371,2.19513567447327,3.41990624869196,2.8518863907631,2.24456908663095,2.96587545310435,3.54616136552028,0.409231043169689,2.32405261778949,2.50778594275484,1.24905288968973,2.57324769289949,2.14871054048298,3.44318997723918,3.52946270591225,3.94175320554716
|short_description=p2@Robo4
}}

Revision as of 17:44, 14 September 2013

Short description:p2@Robo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Robo4_5end
Coexpression cluster:MCL_coexpression_mm9:26
Association with transcript: -49bp_to_ENSMUST00000163262_5end
EntrezGene:Robo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Robo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G382.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G17.94
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D39.44
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D56.13
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.29e-1779
subdivision of trunk3.86e-1366
trunk2.72e-1290
abdomen element6.67e-0949
abdominal segment element6.67e-0949
abdominal segment of trunk6.67e-0949
abdomen6.67e-0949
lung1.57e-0714
respiratory tube1.57e-0714
respiration organ1.57e-0714
pair of lungs1.57e-0714
lung primordium1.57e-0714
lung bud1.57e-0714
epithelial bud4.06e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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