FFCP PHASE1:Mm9::chr4:133276801..133276891,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=93760|HGNC=|MCL_coexpression_id=3457|UniProt=|association_with_transcript=-110bp_to_ENSMUST00000168582_5end|description=CAGE_peak_3_at_Arid1a_5end|id=chr4:133276801..133276891,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.08e-10!94;UBERON:0007811!9.66e-09!86;UBERON:0000475!1.60e-08!200;UBERON:0003056!6.85e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.85e-07,49|phase1_expression=3.20297694209588,0.697950815278722,1.36499771816861,3.32710632437513,0.500895729946347,0.16787927191189,1.16806320297763,5.81054955487093,24.49723765439,14.9801296846076,7.70480857014772,5.74359544766422,10.6144452557348,8.91688104673774,5.3297561890506,3.23960427823721,3.49780939064073,7.09789872056035,6.58149281307546,4.66828616977833,6.88850650223665,9.23405846168233,4.96279599363977,3.35984087866154,2.98232065387321,0,0,0.430942465371778,2.09025761402011,1.00812051903972,0.886922042621219,3.81018404075779,9.84103660135312,15.8481681015439,0.577703239502549,0.831173226792462,1.02084678131185,5.02237956884289,3.906676722619,4.71171369576418,8.2352408324342,6.14740936462601,5.34061388334269,1.6366586336825,1.62203089951223,2.9367480345869,3.12956537739216,4.57852828398938,2.85592037554813,3.88859798148567,4.05960622713551,2.87505128729943,15.7715649694272,30.4652099644765,37.642505503956,6.43148590089868,5.73066879877513,5.15672092277442,10.7227724255587,22.2176211294254,10.1413024560989,1.35537812827653,0,9.44894703145469,7.9109309005358,9.2362414942993,8.08920298399693,9.22123932771731,9.85051316930538,15.3906769698127,10.0955981448663,6.56997264128748,7.28866185140325,6.61450315760752,21.2776945660485,12.8690630125403,8.8092704799511,11.3641730895817,14.7462271925994,10.0233578674947,25.1591019906627,14.0646610050325,6.70039197603314,4.50210088025344,8.70950012327818,18.5616008848411,13.9524247183121,7.64237727883732,2.04460721999597,2.79614772395106,4.63783181922684,1.72084775396277,2.719885334831,7.55584468292944,5.19821133958135,2.68816132258401,6.03911006566533,4.26075806445144,2.59786004602869,3.88673531961374,2.81686839553361,8.98285341900225,2.54805239706646,0,4.32982082022428,4.56047757855178,1.51657333504435,3.19714863213368,14.5005214842416,4.89859058913922,11.1030609130327,21.617048960162,8.76338889573022,9.79697163592047,15.1689432205059,5.40366342717605,8.40462890296871,4.33798070759735,13.2691582792481,11.4854463462661,18.9923705875938,16.9706338597328,3.72783522436244,21.6657789788545,7.74952815209784,6.89734049063197,3.23500836165985,1.19980546198682,3.81210681219194,13.6309481858389,12.8100168789215,17.9685723521396,9.73416193076748,9.46147192122223,11.2205544062162,8.59878694259116,10.5912938404329,7.71323217782577,4.80173241023982,10.9429765060966,25.5036068206899,5.9774547152703,10.4436035287103,19.591626318643,18.2337817725559,20.7544226861457,10.8694000489285,24.5768202202065,17.8921434134259,15.8849107340968,13.3722854364601,8.32943783224784,31.6973864117182,14.9748431604532,17.4914815946752,10.7478504081986,3.51106593656617,2.31613116403244,3.12579849335152,9.52778553663309,28.3776532577126,17.8261440846405,14.4414288706978,15.5443743080449,21.1345944655708,25.3461999777945,9.38956904898667,13.1944836874902,9.2153515951549,17.4017511923841,5.51267904911819,5.26319954731196,9.00155472693308,4.42881181909227,8.20130799400096,17.4937841044784,3.96502539580558,6.87571473325215,26.2344548158338,27.4039272795317,8.63411990858025,12.1010114774006,11.5636582799333,6.27744566171445,6.64340686162316,12.5171205590248,14.0747716928151,7.95825888164603,9.35827618171777,8.98819408654222,8.86166004486246,6.57166201739412,8.91439134479484,17.4800224292885,21.4144697778853,25.8637186363549,27.7352056649705,16.2715102145539,8.22074982615345,11.9564219863478,12.7168969551514,2.83813477020141,4.74324203339438,8.3422552858047,7.66580080941492,9.44420872016386,5.68008339887808,6.02942899381042,6.3656462945355,6.61701116136864,14.7543056365282,6.86403532970204,41.6927798929328,12.2806512730606,10.2972432127805,7.57736633841335,3.76734568396016,4.3419916922703,12.3784637411625,3.7898282354097,12.2223732331519,20.1996652072474,28.3975200429088,10.2178817039508,11.9021820443007,14.0496226457615,14.6600684018758,27.2401568267993,14.1914744105164,20.646777654183,19.858772914578,10.5593812764503,7.53956419696361,8.70249094109935,7.37646409528554,4.69092468718045,8.0275294993896,4.33683240391152,3.93443868904021,4.29200576247434,4.41711507182759,4.68526493155966,7.97066571611356,4.77937595905104,7.5751549188014,5.09537755419898,5.26253912177363,6.42962887404886,7.11518000303742,22.4924921495265,11.3552068166615,10.5058706163681,9.28455668315384,10.5580878702423,3.98235415019888,24.0352829793432,13.9068836203785,19.2377181351016,8.85905678642318,3.68922177532713,3.35956781118687,7.63420831902762,8.55593708123331,8.21695570633122,7.37930260024991,3.09406629744561,10.894067384121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| ||
|EntrezGene=93760 | |||
|HGNC= | |||
|MCL_coexpression_id=3457 | |||
|UniProt= | |||
|association_with_transcript=-110bp_to_ENSMUST00000168582_5end | |||
|description=CAGE_peak_3_at_Arid1a_5end | |||
|id=chr4:133276801..133276891,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.08e-10!94;UBERON:0007811!9.66e-09!86;UBERON:0000475!1.60e-08!200;UBERON:0003056!6.85e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.85e-07,49 | |||
|phase1_expression=3.20297694209588,0.697950815278722,1.36499771816861,3.32710632437513,0.500895729946347,0.16787927191189,1.16806320297763,5.81054955487093,24.49723765439,14.9801296846076,7.70480857014772,5.74359544766422,10.6144452557348,8.91688104673774,5.3297561890506,3.23960427823721,3.49780939064073,7.09789872056035,6.58149281307546,4.66828616977833,6.88850650223665,9.23405846168233,4.96279599363977,3.35984087866154,2.98232065387321,0,0,0.430942465371778,2.09025761402011,1.00812051903972,0.886922042621219,3.81018404075779,9.84103660135312,15.8481681015439,0.577703239502549,0.831173226792462,1.02084678131185,5.02237956884289,3.906676722619,4.71171369576418,8.2352408324342,6.14740936462601,5.34061388334269,1.6366586336825,1.62203089951223,2.9367480345869,3.12956537739216,4.57852828398938,2.85592037554813,3.88859798148567,4.05960622713551,2.87505128729943,15.7715649694272,30.4652099644765,37.642505503956,6.43148590089868,5.73066879877513,5.15672092277442,10.7227724255587,22.2176211294254,10.1413024560989,1.35537812827653,0,9.44894703145469,7.9109309005358,9.2362414942993,8.08920298399693,9.22123932771731,9.85051316930538,15.3906769698127,10.0955981448663,6.56997264128748,7.28866185140325,6.61450315760752,21.2776945660485,12.8690630125403,8.8092704799511,11.3641730895817,14.7462271925994,10.0233578674947,25.1591019906627,14.0646610050325,6.70039197603314,4.50210088025344,8.70950012327818,18.5616008848411,13.9524247183121,7.64237727883732,2.04460721999597,2.79614772395106,4.63783181922684,1.72084775396277,2.719885334831,7.55584468292944,5.19821133958135,2.68816132258401,6.03911006566533,4.26075806445144,2.59786004602869,3.88673531961374,2.81686839553361,8.98285341900225,2.54805239706646,0,4.32982082022428,4.56047757855178,1.51657333504435,3.19714863213368,14.5005214842416,4.89859058913922,11.1030609130327,21.617048960162,8.76338889573022,9.79697163592047,15.1689432205059,5.40366342717605,8.40462890296871,4.33798070759735,13.2691582792481,11.4854463462661,18.9923705875938,16.9706338597328,3.72783522436244,21.6657789788545,7.74952815209784,6.89734049063197,3.23500836165985,1.19980546198682,3.81210681219194,13.6309481858389,12.8100168789215,17.9685723521396,9.73416193076748,9.46147192122223,11.2205544062162,8.59878694259116,10.5912938404329,7.71323217782577,4.80173241023982,10.9429765060966,25.5036068206899,5.9774547152703,10.4436035287103,19.591626318643,18.2337817725559,20.7544226861457,10.8694000489285,24.5768202202065,17.8921434134259,15.8849107340968,13.3722854364601,8.32943783224784,31.6973864117182,14.9748431604532,17.4914815946752,10.7478504081986,3.51106593656617,2.31613116403244,3.12579849335152,9.52778553663309,28.3776532577126,17.8261440846405,14.4414288706978,15.5443743080449,21.1345944655708,25.3461999777945,9.38956904898667,13.1944836874902,9.2153515951549,17.4017511923841,5.51267904911819,5.26319954731196,9.00155472693308,4.42881181909227,8.20130799400096,17.4937841044784,3.96502539580558,6.87571473325215,26.2344548158338,27.4039272795317,8.63411990858025,12.1010114774006,11.5636582799333,6.27744566171445,6.64340686162316,12.5171205590248,14.0747716928151,7.95825888164603,9.35827618171777,8.98819408654222,8.86166004486246,6.57166201739412,8.91439134479484,17.4800224292885,21.4144697778853,25.8637186363549,27.7352056649705,16.2715102145539,8.22074982615345,11.9564219863478,12.7168969551514,2.83813477020141,4.74324203339438,8.3422552858047,7.66580080941492,9.44420872016386,5.68008339887808,6.02942899381042,6.3656462945355,6.61701116136864,14.7543056365282,6.86403532970204,41.6927798929328,12.2806512730606,10.2972432127805,7.57736633841335,3.76734568396016,4.3419916922703,12.3784637411625,3.7898282354097,12.2223732331519,20.1996652072474,28.3975200429088,10.2178817039508,11.9021820443007,14.0496226457615,14.6600684018758,27.2401568267993,14.1914744105164,20.646777654183,19.858772914578,10.5593812764503,7.53956419696361,8.70249094109935,7.37646409528554,4.69092468718045,8.0275294993896,4.33683240391152,3.93443868904021,4.29200576247434,4.41711507182759,4.68526493155966,7.97066571611356,4.77937595905104,7.5751549188014,5.09537755419898,5.26253912177363,6.42962887404886,7.11518000303742,22.4924921495265,11.3552068166615,10.5058706163681,9.28455668315384,10.5580878702423,3.98235415019888,24.0352829793432,13.9068836203785,19.2377181351016,8.85905678642318,3.68922177532713,3.35956781118687,7.63420831902762,8.55593708123331,8.21695570633122,7.37930260024991,3.09406629744561,10.8940673841212,18.7263537792563,18.1102157295856,13.0745591369271,14.5418991586664,17.3017753074008,14.973960874793,16.1366423030738,7.50949465803873,6.77862626764225,4.41056796109924,8.244312647074,9.68786560175433,7.65974146587579,10.3853939282729,9.35603128546849,13.1166376483433,9.6421157045465,14.3531539870196,8.04908785056568,19.26023084645,23.169320211577,22.6912418016902,12.5827995263587,5.94924504978494,3.63873776041511,5.66619892598138,15.2747298882418,12.811607740036,12.6058069618646,15.0127423742304,18.8179466413022,17.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| |||
|short_description=p3@Arid1a | |||
}} | |||
Revision as of 04:02, 14 September 2013
| Short description: | p3@Arid1a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Arid1a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3457 |
| Association with transcript: | -110bp_to_ENSMUST00000168582_5end |
| EntrezGene: | Arid1a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pre-chordal neural plate | 6.85e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
