FFCP PHASE1:Mm9::chrX:20002906..20002920,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=382207|HGNC=|MCL_coexpression_id=1697|UniProt=|association_with_transcript=0bp_to_ENSMUST00000136093_5end|description=CAGE_peak_1_at_Phf16_5end|id=chrX:20002906..20002920,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.05e-12!130;UBERON:0000925!3.05e-12!130;UBERON:0006595!3.05e-12!130;UBERON:0000464!1.41e-11!57;UBERON:0001007!3.11e-11!128;UBERON:0001555!3.11e-11!128;UBERON:0007026!3.11e-11!128;UBERON:0004921!3.24e-11!126;UBERON:0004185!3.24e-11!126;UBERON:0000466!6.98e-11!79;UBERON:0000077!8.46e-09!97;UBERON:0001048!3.26e-08!147;UBERON:0001041!4.88e-08!92;UBERON:0000926!5.41e-08!193;UBERON:0004120!5.41e-08!193;UBERON:0006603!5.41e-08!193;UBERON:0003133!6.79e-08!24;UBERON:0005911!1.21e-07!69;UBERON:0000065!1.41e-07!41;UBERON:0005178!1.58e-07!17;UBERON:0005181!1.58e-07!17;UBERON:0002224!1.58e-07!17;UBERON:0000915!1.58e-07!17;UBERON:0008947!1.58e-07!17;UBERON:0003258!1.58e-07!17;UBERON:0002048!3.03e-07!14;UBERON:0000117!3.03e-07!14;UBERON:0000171!3.03e-07!14;UBERON:0000170!3.03e-07!14;UBERON:0005597!3.03e-07!14;UBERON:0000118!3.03e-07!14;UBERON:0001004!4.03e-07!42;UBERON:0005156!5.32e-07!26;UBERON:0000990!5.32e-07!26;UBERON:0000991!6.48e-07!18;UBERON:0005564!6.48e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.41e-12,118;UBERON:0000925,9.41e-12,118;UBERON:0006595,9.41e-12,118;UBERON:0001007,9.76e-11,116;UBERON:0001555,9.76e-11,116;UBERON:0007026,9.76e-11,116;UBERON:0004921,9.90e-11,114;UBERON:0001048,4.70e-08,134;UBERON:0005911,6.80e-08,69;UBERON:0001041,7.22e-08,80;UBERON:0003133,8.28e-08,24;UBERON:0005178,9.67e-08,17;UBERON:0005181,9.67e-08,17;UBERON:0002224,9.67e-08,17;UBERON:0000915,9.67e-08,17;UBERON:0008947,9.67e-08,17;UBERON:0003258,9.67e-08,17;UBERON:0000065,1.19e-07,41;UBERON:0002048,1.89e-07,14;UBERON:0000117,1.89e-07,14;UBERON:0000171,1.89e-07,14;UBERON:0000170,1.89e-07,14;UBERON:0005597,1.89e-07,14;UBERON:0000118,1.89e-07,14;UBERON:0001004,4.34e-07,42;UBERON:0000991,4.81e-07,18;UBERON:0005564,4.81e-07,18;UBERON:0003886,7.73e-07,38|phase1_expression=0.480446541314382,3.48975407639361,0.454999239389536,2.72217790176147,0,7.05092942029937,4.43864017131499,1.54947988129892,9.15126693985834,10.0647746318457,1.36974374580404,2.55270908785077,1.54080656938085,0.786783621770977,2.33176833270964,1.82227740650843,0,0.630924330716475,0.685572168028694,0.42438965179803,4.76242424845991,2.87943758482567,4.17919662622297,2.71987118748791,1.37645568640302,0.57423196411502,1.7230479846363,3.23206849028834,1.33016393619462,1.51218077855958,3.10422714917427,5.08024538767705,1.23012957516914,0,6.35473563452804,3.98963148860382,6.12508068787107,0.837063261473815,0,1.0470474879476,0.588231488031014,0,0,0.125896817975577,0.506884656097573,0.550640256485045,0,0,0,0,0.279972843250725,0,0.838913030288682,5.07753499407941,4.36921938885203,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,0.270011876663381,0.420649922702764,0.571301968807607,0,0.61245399607477,1.15014565221884,0.919218786610021,0,0.255374676170375,0,0.659431438650969,0.457438218012048,0.52091337055676,0.279182999001381,0,0.61119299110724,0.294628585473668,0.284743361598206,0.745597783301202,4.54357159999104,4.1564358058732,2.89864488701678,0,0.679971333707751,1.61910957491345,0,0.896053774194671,0.702222100658759,1.36344258062446,1.29893002301434,0.70667914902068,1.40843419776681,1.28326477414318,2.54805239706646,0,1.73192832808971,3.80039798212648,5.05524445014783,1.7127581957859,0.776813650941515,0.742210695324124,2.25530924795977,1.52232739156071,1.15307748628029,1.20578112442098,2.11659672844269,0.753999547978053,66.4954463205466,0.722996784599558,0.884610551949874,1.7794353494215,0.441683036920787,0.484875253135222,1.86391761218122,0.585561594023094,0.209446706813455,0.766371165625774,1.91704199209472,2.39961092397363,2.41433431438823,0.299581278809645,0,0.376963056338593,0.521472960576829,0.255715457330331,0.20778804455956,0.811206315338788,1.52759045775474,1.7416975885413,6.82351447770922,1.89397670297827,1.69156575851515,1.37941262660084,1.98068342785884,3.16480117455002,3.26575195926374,3.33095672740609,1.96773621575431,0.517406741478031,3.66465587985832,2.83659120251729,2.99116911078713,1.7535658594206,2.50242524303038,1.0447564995665,1.02891068203972,5.57295947091781,4.91549231119264,2.83082697826187,0.852490498186778,3.31401236056803,3.75241695969754,3.24111710629827,3.07768156260773,2.36117078096885,2.00547246753592,2.79040733700489,2.68273401399619,1.98501082024188,2.13927804887525,1.47750717671186,0.486412857275134,1.16959989940266,1.75640092232841,1.20785776884335,0.841159794256509,0.92614151141356,1.32167513193519,1.05780226665418,4.69234151177515,7.19933682767359,7.08771037271513,5.24377164020691,3.33567065767305,4.37518940058886,1.89811624617805,2.9645811850322,3.77002813200404,4.37704238490532,3.11942539390592,0,2.3775185486216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| ||
|EntrezGene=382207 | |||
|HGNC= | |||
|MCL_coexpression_id=1697 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000136093_5end | |||
|description=CAGE_peak_1_at_Phf16_5end | |||
|id=chrX:20002906..20002920,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.05e-12!130;UBERON:0000925!3.05e-12!130;UBERON:0006595!3.05e-12!130;UBERON:0000464!1.41e-11!57;UBERON:0001007!3.11e-11!128;UBERON:0001555!3.11e-11!128;UBERON:0007026!3.11e-11!128;UBERON:0004921!3.24e-11!126;UBERON:0004185!3.24e-11!126;UBERON:0000466!6.98e-11!79;UBERON:0000077!8.46e-09!97;UBERON:0001048!3.26e-08!147;UBERON:0001041!4.88e-08!92;UBERON:0000926!5.41e-08!193;UBERON:0004120!5.41e-08!193;UBERON:0006603!5.41e-08!193;UBERON:0003133!6.79e-08!24;UBERON:0005911!1.21e-07!69;UBERON:0000065!1.41e-07!41;UBERON:0005178!1.58e-07!17;UBERON:0005181!1.58e-07!17;UBERON:0002224!1.58e-07!17;UBERON:0000915!1.58e-07!17;UBERON:0008947!1.58e-07!17;UBERON:0003258!1.58e-07!17;UBERON:0002048!3.03e-07!14;UBERON:0000117!3.03e-07!14;UBERON:0000171!3.03e-07!14;UBERON:0000170!3.03e-07!14;UBERON:0005597!3.03e-07!14;UBERON:0000118!3.03e-07!14;UBERON:0001004!4.03e-07!42;UBERON:0005156!5.32e-07!26;UBERON:0000990!5.32e-07!26;UBERON:0000991!6.48e-07!18;UBERON:0005564!6.48e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.41e-12,118;UBERON:0000925,9.41e-12,118;UBERON:0006595,9.41e-12,118;UBERON:0001007,9.76e-11,116;UBERON:0001555,9.76e-11,116;UBERON:0007026,9.76e-11,116;UBERON:0004921,9.90e-11,114;UBERON:0001048,4.70e-08,134;UBERON:0005911,6.80e-08,69;UBERON:0001041,7.22e-08,80;UBERON:0003133,8.28e-08,24;UBERON:0005178,9.67e-08,17;UBERON:0005181,9.67e-08,17;UBERON:0002224,9.67e-08,17;UBERON:0000915,9.67e-08,17;UBERON:0008947,9.67e-08,17;UBERON:0003258,9.67e-08,17;UBERON:0000065,1.19e-07,41;UBERON:0002048,1.89e-07,14;UBERON:0000117,1.89e-07,14;UBERON:0000171,1.89e-07,14;UBERON:0000170,1.89e-07,14;UBERON:0005597,1.89e-07,14;UBERON:0000118,1.89e-07,14;UBERON:0001004,4.34e-07,42;UBERON:0000991,4.81e-07,18;UBERON:0005564,4.81e-07,18;UBERON:0003886,7.73e-07,38 | |||
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| |||
|short_description=p1@Phf16 | |||
}} |
Revision as of 19:42, 14 September 2013
Short description: | p1@Phf16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phf16_5end |
Coexpression cluster: | MCL_coexpression_mm9:1697 |
Association with transcript: | 0bp_to_ENSMUST00000136093_5end |
EntrezGene: | Phf16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.41e-12 | 118 |
endoderm | 9.41e-12 | 118 |
presumptive endoderm | 9.41e-12 | 118 |
digestive system | 9.76e-11 | 116 |
digestive tract | 9.76e-11 | 116 |
primitive gut | 9.76e-11 | 116 |
subdivision of digestive tract | 9.90e-11 | 114 |
primordium | 4.70e-08 | 134 |
endo-epithelium | 6.80e-08 | 69 |
foregut | 7.22e-08 | 80 |
reproductive organ | 8.28e-08 | 24 |
thoracic cavity element | 9.67e-08 | 17 |
thoracic segment organ | 9.67e-08 | 17 |
thoracic cavity | 9.67e-08 | 17 |
thoracic segment of trunk | 9.67e-08 | 17 |
respiratory primordium | 9.67e-08 | 17 |
endoderm of foregut | 9.67e-08 | 17 |
respiratory tract | 1.19e-07 | 41 |
lung | 1.89e-07 | 14 |
respiratory tube | 1.89e-07 | 14 |
respiration organ | 1.89e-07 | 14 |
pair of lungs | 1.89e-07 | 14 |
lung primordium | 1.89e-07 | 14 |
lung bud | 1.89e-07 | 14 |
respiratory system | 4.34e-07 | 42 |
gonad | 4.81e-07 | 18 |
gonad primordium | 4.81e-07 | 18 |
body cavity precursor | 7.73e-07 | 38 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.