FFCP PHASE1:Mm9::chr3:68848619..68848685,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66949|HGNC=|MCL_coexpression_id=49|UniProt=Q922Y2,D3Z0I5,D3Z1L3|association_with_transcript=0bp_to_ENSMUST00000107802,ENSMUST00000136512,ENSMUST00000142560,ENSMUST00000143454,ENSMUST00000153259,NM_025863,uc008pmd.2_5end|description=CAGE_peak_1_at_Trim59_5end|id=chr3:68848619..68848685,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.68e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.68e-08,29;UBERON:0005057,1.68e-08,29|phase1_expression=10.7299727560212,3.48975407639361,2.27499619694768,3.0246421130683,3.00537437967808,9.40123922706583,11.2134067485852,51.9075760235137,18.0209564354133,32.0668401061131,10.1018601253048,7.09972215058494,25.8513102196121,18.4457049104085,139.906099962578,180.202987976945,239.949724197954,38.0131909256676,35.5126383038863,34.3755617956405,10.8855411393369,45.1773827964028,34.2171723772005,9.27956052201759,11.6998733344257,3.44539178469012,3.4460959692726,9.26526300549323,6.65081968097309,8.06496415231778,7.53883736228036,22.2260735710871,31.3683041668131,0,23.108129580102,27.5949511295097,22.8669679013853,31.808403936005,46.0987853269042,48.1641844455894,28.8233429135197,41.6657745824652,32.5291936530873,21.6542526917993,18.2478476195126,33.5890556455877,15.6478268869608,53.6341884695898,22.6276768216506,26.6368961731768,39.1961980551015,25.8754615856949,28.1874778176997,39.1695556686126,38.6507869013834,22.8960898071993,15.7593391966316,10.3134418455488,25.2895576074497,22.7466121086974,20.9164363157039,27.4464070975997,31.1253178638899,4.94944844504769,1.97773272513395,1.4209602298922,8.68840320503374,14.9845139075406,50.6005308065371,43.7419240194678,49.6366908789262,6.56997264128748,9.27647871996777,54.8758780482994,59.1366556182518,34.9303138911808,15.4162233399144,34.8586432972562,38.2480267808046,24.9265083810066,22.780423257,22.3992749339407,29.314214895145,16.8828783009504,22.6141406709679,14.142172102736,12.6710795911202,12.6751623161204,4.92220256665696,25.3164726357731,14.2033599463822,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,16.5724415755467,54.3672729024004,38.9679006904303,40.6340510686891,11.2674735821344,37.2146784501522,50.9610479413291,56.8853362522665,26.1954159623569,20.522149103483,24.2651733607096,9.36307813696292,54.6358934495532,4.60170631100957,31.7478147982029,26.4884966131563,22.6003187310937,16.8809357418937,17.6383060703557,13.3206586809456,1.97755974187499,2.02439099687876,81.3841707793884,29.9268672402707,73.0985426103903,86.3077950580695,7.45567044872489,10.8328894894272,8.58731497935166,10.9846533739694,20.4883862905124,25.1959147017231,20.0770958775442,26.5129431746536,21.0450277296568,18.8481528169297,12.5153510538439,8.43861009190091,32.6227229958509,20.1179166204019,33.0977932513528,42.795997889872,0.505445516867349,2.94618598241064,59.9855242058064,65.0622955546728,50.0572720858871,40.0874815443002,42.5228119695799,43.6867786171338,39.4484260396458,4.65666067330228,80.1912933710173,72.9949469447782,51.0258260075452,36.8248830478326,38.0924731439069,32.0391993200393,28.3979348242962,48.3653268368938,16.8531164955176,21.1025283834066,14.4923384691752,51.160065816269,47.6087901761625,45.0155153652537,39.7731155783153,36.2046186415223,41.8063875924795,34.8800917125612,29.7783475553577,24.1704258700041,21.228220638839,12.8050621981694,7.29619285912702,4.23979963533464,5.48875288227627,8.05238512562231,19.3466752678997,22.1244916615462,2.31293148088659,13.4869788998408,62.4934574068236,56.8979846058074,43.9438043108338,29.2441110703847,22.6825604721768,20.1639163679313,9.49058123089023,8.72904460037258,17.3421294072186,15.3196483471686,13.8424501854575,16.178749355776,11.8875927431082,9.35963984295526,64.4870863240478,52.2115702626461,58.6080225500018,45.8215487651957,30.6444929724849,29.6674518136047,18.0224130804133,3.83786384746966,6.75094529717912,3.57851775373222,1.48226313543574,108.449318715461,123.439048931091,138.96478545384,180.342647914379,153.62985076229,129.859184408524,96.6659021834724,32.5891805817821,54.9122826376163,50.3188722845741,19.7234702264307,6.86482880852033,4.54641980304801,7.17589654087649,0.964887042726734,9.60716588866344,73.7121591787186,65.5119205296944,56.0158783058121,58.2031815755485,39.8664892711521,17.377185784679,11.1226179278945,26.3250690657339,20.8176808269848,14.3509291791738,5.73521601505083,14.5055384767352,10.7040303350319,10.5553898757491,6.52686820582452,7.86822836830458,8.00216564283724,42.3853557567771,39.9691851279413,92.1314393016916,6.05930225290495,39.7540356464483,45.2908943384101,45.023490126155,42.5364460355543,31.8602103937824,36.2337959409706,57.8879303395099,33.0249119439782,38.7382022387593,14.4594592389813,15.1875891172847,26.531774946421,32.2516179520081,9.56826713240706,1.32745138339963,33.5037277893874,35.0695326079111,21.5009790921724,15.0603965369194,12.604841065701,17.573123935439,20.3578888507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| ||
|EntrezGene=66949 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|UniProt=Q922Y2,D3Z0I5,D3Z1L3 | |||
|association_with_transcript=0bp_to_ENSMUST00000107802,ENSMUST00000136512,ENSMUST00000142560,ENSMUST00000143454,ENSMUST00000153259,NM_025863,uc008pmd.2_5end | |||
|description=CAGE_peak_1_at_Trim59_5end | |||
|id=chr3:68848619..68848685,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.68e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.68e-08,29;UBERON:0005057,1.68e-08,29 | |||
|phase1_expression=10.7299727560212,3.48975407639361,2.27499619694768,3.0246421130683,3.00537437967808,9.40123922706583,11.2134067485852,51.9075760235137,18.0209564354133,32.0668401061131,10.1018601253048,7.09972215058494,25.8513102196121,18.4457049104085,139.906099962578,180.202987976945,239.949724197954,38.0131909256676,35.5126383038863,34.3755617956405,10.8855411393369,45.1773827964028,34.2171723772005,9.27956052201759,11.6998733344257,3.44539178469012,3.4460959692726,9.26526300549323,6.65081968097309,8.06496415231778,7.53883736228036,22.2260735710871,31.3683041668131,0,23.108129580102,27.5949511295097,22.8669679013853,31.808403936005,46.0987853269042,48.1641844455894,28.8233429135197,41.6657745824652,32.5291936530873,21.6542526917993,18.2478476195126,33.5890556455877,15.6478268869608,53.6341884695898,22.6276768216506,26.6368961731768,39.1961980551015,25.8754615856949,28.1874778176997,39.1695556686126,38.6507869013834,22.8960898071993,15.7593391966316,10.3134418455488,25.2895576074497,22.7466121086974,20.9164363157039,27.4464070975997,31.1253178638899,4.94944844504769,1.97773272513395,1.4209602298922,8.68840320503374,14.9845139075406,50.6005308065371,43.7419240194678,49.6366908789262,6.56997264128748,9.27647871996777,54.8758780482994,59.1366556182518,34.9303138911808,15.4162233399144,34.8586432972562,38.2480267808046,24.9265083810066,22.780423257,22.3992749339407,29.314214895145,16.8828783009504,22.6141406709679,14.142172102736,12.6710795911202,12.6751623161204,4.92220256665696,25.3164726357731,14.2033599463822,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,16.5724415755467,54.3672729024004,38.9679006904303,40.6340510686891,11.2674735821344,37.2146784501522,50.9610479413291,56.8853362522665,26.1954159623569,20.522149103483,24.2651733607096,9.36307813696292,54.6358934495532,4.60170631100957,31.7478147982029,26.4884966131563,22.6003187310937,16.8809357418937,17.6383060703557,13.3206586809456,1.97755974187499,2.02439099687876,81.3841707793884,29.9268672402707,73.0985426103903,86.3077950580695,7.45567044872489,10.8328894894272,8.58731497935166,10.9846533739694,20.4883862905124,25.1959147017231,20.0770958775442,26.5129431746536,21.0450277296568,18.8481528169297,12.5153510538439,8.43861009190091,32.6227229958509,20.1179166204019,33.0977932513528,42.795997889872,0.505445516867349,2.94618598241064,59.9855242058064,65.0622955546728,50.0572720858871,40.0874815443002,42.5228119695799,43.6867786171338,39.4484260396458,4.65666067330228,80.1912933710173,72.9949469447782,51.0258260075452,36.8248830478326,38.0924731439069,32.0391993200393,28.3979348242962,48.3653268368938,16.8531164955176,21.1025283834066,14.4923384691752,51.160065816269,47.6087901761625,45.0155153652537,39.7731155783153,36.2046186415223,41.8063875924795,34.8800917125612,29.7783475553577,24.1704258700041,21.228220638839,12.8050621981694,7.29619285912702,4.23979963533464,5.48875288227627,8.05238512562231,19.3466752678997,22.1244916615462,2.31293148088659,13.4869788998408,62.4934574068236,56.8979846058074,43.9438043108338,29.2441110703847,22.6825604721768,20.1639163679313,9.49058123089023,8.72904460037258,17.3421294072186,15.3196483471686,13.8424501854575,16.178749355776,11.8875927431082,9.35963984295526,64.4870863240478,52.2115702626461,58.6080225500018,45.8215487651957,30.6444929724849,29.6674518136047,18.0224130804133,3.83786384746966,6.75094529717912,3.57851775373222,1.48226313543574,108.449318715461,123.439048931091,138.96478545384,180.342647914379,153.62985076229,129.859184408524,96.6659021834724,32.5891805817821,54.9122826376163,50.3188722845741,19.7234702264307,6.86482880852033,4.54641980304801,7.17589654087649,0.964887042726734,9.60716588866344,73.7121591787186,65.5119205296944,56.0158783058121,58.2031815755485,39.8664892711521,17.377185784679,11.1226179278945,26.3250690657339,20.8176808269848,14.3509291791738,5.73521601505083,14.5055384767352,10.7040303350319,10.5553898757491,6.52686820582452,7.86822836830458,8.00216564283724,42.3853557567771,39.9691851279413,92.1314393016916,6.05930225290495,39.7540356464483,45.2908943384101,45.023490126155,42.5364460355543,31.8602103937824,36.2337959409706,57.8879303395099,33.0249119439782,38.7382022387593,14.4594592389813,15.1875891172847,26.531774946421,32.2516179520081,9.56826713240706,1.32745138339963,33.5037277893874,35.0695326079111,21.5009790921724,15.0603965369194,12.604841065701,17.573123935439,20.3578888507403,22.1028374598527,7.26884543252377,1.05418608574999,7.21948802737308,3.06395645178409,54.3784503974557,26.7772475430302,35.3656107802127,25.7143338781297,22.652839835463,17.4421961838248,8.82948352432338,16.4270195644597,6.77862626764225,1.54369878638473,34.9558856235938,24.3811284310817,42.3396732995654,45.1227460331856,53.674074216635,9.91034844541493,49.5085556368061,122.001808889667,44.3731766120928,67.7811970173145,159.171346168964,133.960343166605,147.104365371794,18.5276488693302,25.4711643229058,22.2501957825122,6.68269432610579,65.6397186680856,43.7136854322725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| |||
|short_description=p1@Trim59 | |||
}} | |||
Revision as of 02:30, 14 September 2013
| Short description: | p1@Trim59 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Trim59_5end |
| Coexpression cluster: | MCL_coexpression_mm9:49 |
| Association with transcript: | 0bp_to_ENSMUST00000107802, ENSMUST00000136512, ENSMUST00000142560, ENSMUST00000143454, ENSMUST00000153259, NM_025863, uc008pmd.2_5end |
| EntrezGene: | Trim59 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 1.68e-08 | 29 |
| immune organ | 1.68e-08 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
