FFCP PHASE1:Mm9::chr7:17501389..17501409,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=741|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:17501389..17501409,-|id=chr7:17501389..17501409,-|ontology_enrichment_celltype=CL:0000117!8.86e-10!23;CL:0000337!8.86e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-10,23;CL:0000337,2.83e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.78e-20!52;UBERON:0005068!1.78e-20!52;UBERON:0006241!1.78e-20!52;UBERON:0007135!1.78e-20!52;UBERON:0000955!4.49e-19!50;UBERON:0006238!4.49e-19!50;UBERON:0001017!5.67e-19!73;UBERON:0005743!5.67e-19!73;UBERON:0002616!1.12e-18!49;UBERON:0000073!3.79e-18!75;UBERON:0001016!3.79e-18!75;UBERON:0002346!2.69e-17!71;UBERON:0003075!2.69e-17!71;UBERON:0007284!2.69e-17!71;UBERON:0000033!3.20e-16!63;UBERON:0002020!1.82e-15!34;UBERON:0003080!1.45e-14!40;UBERON:0002780!4.62e-14!39;UBERON:0001890!4.62e-14!39;UBERON:0006240!4.62e-14!39;UBERON:0003056!2.34e-13!49;UBERON:0004121!9.92e-13!102;UBERON:0000924!9.92e-13!102;UBERON:0006601!9.92e-13!102;UBERON:0002791!2.18e-12!29;UBERON:0003528!2.18e-12!29;UBERON:0001893!2.18e-12!29;UBERON:0007811!1.09e-09!86;UBERON:0000956!2.18e-08!21;UBERON:0001869!2.18e-08!21;UBERON:0000203!2.18e-08!21;UBERON:0002619!5.62e-08!17;UBERON:0002021!1.01e-07!10;UBERON:0000411!1.01e-07!10;UBERON:0001950!1.01e-07!10;UBERON:0000153!2.27e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.40e-23,54;UBERON:0001049,2.63e-21,52;UBERON:0005068,2.63e-21,52;UBERON:0006241,2.63e-21,52;UBERON:0007135,2.63e-21,52;UBERON:0001017,4.58e-20,73;UBERON:0001016,5.01e-19,75;UBERON:0000955,8.31e-18,47;UBERON:0006238,8.31e-18,47;UBERON:0002346,1.51e-17,64;UBERON:0003075,1.51e-17,64;UBERON:0007284,1.51e-17,64;UBERON:0002616,2.15e-17,46;UBERON:0010314,1.20e-16,92;UBERON:0002020,5.76e-16,34;UBERON:0003080,4.79e-15,40;UBERON:0002780,1.63e-14,39;UBERON:0001890,1.63e-14,39;UBERON:0006240,1.63e-14,39;UBERON:0003056,2.37e-13,49;UBERON:0010371,6.58e-13,73;UBERON:0003528,1.03e-12,29;UBERON:0002791,1.03e-12,29;UBERON:0001893,1.03e-12,29;UBERON:0004121,1.49e-12,95;UBERON:0000924,1.49e-12,95;UBERON:0006601,1.49e-12,95;UBERON:0000956,1.72e-08,21;UBERON:0001869,1.72e-08,21;UBERON:0000203,1.72e-08,21;UBERON:0002021,4.13e-08,10;UBERON:0000411,4.13e-08,10;UBERON:0001950,4.13e-08,10;UBERON:0002619,4.99e-08,17;UBERON:0003076,4.75e-07,12;UBERON:0003057,4.75e-07,12|phase1_expression=1.44133962394315,0,0.454999239389536,0.60492842261366,0,0.33575854382378,1.16806320297763,0.516493293766305,0.140788722151667,0,0.513653904676515,0.239316476986009,0.684802919724823,1.31130603628496,0.333109761815663,0.404950534779652,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,2.04103896362567,1.29078236561151,1.56719873483361,1.91990907352088,2.06468352960453,0,0.430761996159075,1.50829862880122,6.46079626151671,1.76421090831952,1.33038306393183,1.27006134691926,0,0,0,1.82858109894342,0.408338712524738,0,0,1.57057123192139,1.17646297606203,3.41522742479223,0.971020706062307,0.755380907853464,1.31790010585369,1.65192076945513,3.9119567217402,3.2703773457067,0.878744730937887,3.4997381833371,2.65974201088189,1.43752564364972,0.167782606057736,0,0.672187598284928,4.63066984864705,2.0057340795713,3.6097046459421,2.63011399117477,2.64495489636016,5.70448263155561,2.03306719241479,6.22506357277798,4.49949858640699,2.96659908770092,3.5524005747305,9.88680364710736,13.831858991576,1.55534418462716,2.97013064329719,1.47227472945967,17.9960120174396,18.3320888989839,0.489963196859816,3.06705507258356,6.43453150627015,9.91042928994498,11.2364857514965,9.21639199537461,2.90149833006426,4.66586982372289,5.73004707612436,25.9640189071284,10.6924895906019,9.47349136216223,12.374400589894,12.386336229522,3.35519002485541,0.681535739998656,1.13357340160178,0,0,0,1.07940638327563,0,0.448026887097336,1.12355536105401,1.87473354835864,4.41636207824877,1.41335829804136,1.54927761754349,1.28326477414318,0,0,1.73192832808971,1.52015919285059,1.51657333504435,1.82694207550496,0,1.48442139064825,2.60227990149204,1.21786191324856,2.07553947530453,2.26083960828934,1.76383060703557,1.0053327306374,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,1.93950101254089,0,1.46390398505774,3.56059401582874,1.53274233125155,0.718890747035522,0,1.27070227073065,5.39246301857362,5.03250663100489,4.27224797183739,5.73620256634512,8.43861009190091,6.2336413367868,6.65189178577806,1.73126918545538,0.248813941220186,0.505445516867349,0.210441855886474,3.12289063110489,0.919608417733892,0.900310649026746,1.35634336052144,1.56483948048054,2.0498195245576,2.71735001223214,2.32833033665114,1.5089759505299,0.189106080167819,0.351902248327898,0.657587197282725,1.39023624612799,0.348252166522167,0.823128545631774,2.7864797354589,0,0.772043721344145,0.568326998791185,0,1.40715635988658,1.80062061461015,0.473489471170421,1.18058539048442,3.23960937063494,1.39520366850245,1.87791380979733,1.5179494507732,1.645598499134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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=741 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:17501389..17501409,- | |||
|id=chr7:17501389..17501409,- | |||
|ontology_enrichment_celltype=CL:0000117!8.86e-10!23;CL:0000337!8.86e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-10,23;CL:0000337,2.83e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p@chr7:17501389..17501409,- | |||
}} |
Revision as of 12:35, 14 September 2013
Short description: | p@chr7:17501389..17501409, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:17501389..17501409, - |
Coexpression cluster: | MCL_coexpression_mm9:741 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.83e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.83e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.