FFCP PHASE1:Mm9::chr5:136410489..136410503,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22628|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-3bp_to_ENSMUST00000126639_5end|description=CAGE_peak_2_at_Ywhag_5end|id=chr5:136410489..136410503,-|ontology_enrichment_celltype=CL:0002319!1.04e-14!43;CL:0000221!4.07e-14!44;CL:0000133!4.07e-14!44;CL:0000117!1.68e-13!23;CL:0000337!1.68e-13!23;CL:0000055!1.90e-13!50;CL:0000540!1.23e-12!33;CL:0000047!1.23e-12!33;CL:0000031!1.23e-12!33;CL:0000404!1.23e-12!33;CL:0000393!5.10e-12!39;CL:0000211!5.10e-12!39|ontology_enrichment_celltype_v019_2=CL:0002319,1.04e-14,43;CL:0000221,4.07e-14,44;CL:0000133,4.07e-14,44;CL:0000117,1.68e-13,23;CL:0000337,1.68e-13,23;CL:0000540,1.23e-12,33;CL:0000047,1.23e-12,33;CL:0000031,1.23e-12,33;CL:0000404,1.23e-12,33;CL:0000393,5.10e-12,39;CL:0000211,5.10e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.03e-31!75;UBERON:0001016!3.03e-31!75;UBERON:0001017!3.96e-31!73;UBERON:0005743!3.96e-31!73;UBERON:0004121!4.05e-27!102;UBERON:0000924!4.05e-27!102;UBERON:0006601!4.05e-27!102;UBERON:0002346!4.07e-27!71;UBERON:0003075!4.07e-27!71;UBERON:0007284!4.07e-27!71;UBERON:0001049!1.95e-26!52;UBERON:0005068!1.95e-26!52;UBERON:0006241!1.95e-26!52;UBERON:0007135!1.95e-26!52;UBERON:0000955!7.41e-25!50;UBERON:0006238!7.41e-25!50;UBERON:0002616!2.38e-24!49;UBERON:0000033!5.23e-22!63;UBERON:0002020!1.28e-20!34;UBERON:0003080!2.26e-19!40;UBERON:0003056!4.74e-19!49;UBERON:0002780!9.27e-19!39;UBERON:0001890!9.27e-19!39;UBERON:0006240!9.27e-19!39;UBERON:0002791!1.89e-17!29;UBERON:0003528!1.89e-17!29;UBERON:0001893!1.89e-17!29;UBERON:0000956!4.45e-13!21;UBERON:0001869!4.45e-13!21;UBERON:0000203!4.45e-13!21;UBERON:0002619!4.47e-11!17;UBERON:0007811!4.75e-11!86;UBERON:0000153!5.72e-10!94;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0003076!1.40e-07!12;UBERON:0003057!1.40e-07!12;UBERON:0000025!5.96e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.03e-31,75;UBERON:0001017,3.96e-31,73;UBERON:0000073,9.54e-28,54;UBERON:0001049,1.95e-26,52;UBERON:0005068,1.95e-26,52;UBERON:0006241,1.95e-26,52;UBERON:0007135,1.95e-26,52;UBERON:0002346,2.05e-26,64;UBERON:0003075,2.05e-26,64;UBERON:0007284,2.05e-26,64;UBERON:0004121,6.68e-26,95;UBERON:0000924,6.68e-26,95;UBERON:0006601,6.68e-26,95;UBERON:0010314,3.53e-23,92;UBERON:0000955,6.70e-23,47;UBERON:0006238,6.70e-23,47;UBERON:0002616,2.11e-22,46;UBERON:0010371,3.34e-21,73;UBERON:0002020,1.28e-20,34;UBERON:0003080,2.26e-19,40;UBERON:0003056,4.74e-19,49;UBERON:0002780,9.27e-19,39;UBERON:0001890,9.27e-19,39;UBERON:0006240,9.27e-19,39;UBERON:0003528,1.89e-17,29;UBERON:0002791,1.89e-17,29;UBERON:0001893,1.89e-17,29;UBERON:0000956,4.45e-13,21;UBERON:0001869,4.45e-13,21;UBERON:0000203,4.45e-13,21;UBERON:0002619,4.47e-11,17;UBERON:0002021,3.59e-08,10;UBERON:0000411,3.59e-08,10;UBERON:0001950,3.59e-08,10;UBERON:0003076,1.40e-07,12;UBERON:0003057,1.40e-07,12;UBERON:0000025,5.96e-07,114|phase1_expression=12.8119077683835,4.53668029931169,4.09499315450582,1.20985684522732,1.50268718983904,6.04365378882803,7.2419918584613,5.03580961422147,12.67098499365,16.8526458951835,6.67750076079469,11.8062795313098,4.10881751834894,6.29426897416781,8.32774404539157,7.28910962603373,6.29605690315332,9.62159604342625,7.81552271552711,6.79023442876848,27.7241125892487,9.82980416888764,10.7091913546964,7.35965144849671,5.73523202667925,4.01962374880514,4.73838195774982,6.67960821326256,2.85035129184561,4.03248207615889,7.09537634096975,14.6057054895715,17.221814052368,0,3.17736781726402,5.31950865147176,3.87921776898501,7.53356935326434,10.1573594788094,9.94695113550217,13.5293242247133,8.19654581950135,8.73918635456076,14.7299277031425,15.1051627517077,14.5001934207728,28.1660883965294,26.8170942347949,26.3623419281366,27.9979054666968,23.937678097937,27.3129872293446,8.55691290894455,6.5282592781021,4.7053131879945,17.7509010864803,14.6132054368766,17.532851137433,106.620774873008,130.660771880192,123.597123683705,26.0910289693232,21.3430751066673,24.7472422252385,34.6103226898441,20.6039233334369,18.2756067416227,15.3687322128622,71.5458324928496,93.0190915105349,88.5468087289318,156.251088468881,150.411476388049,88.0708846355519,83.9606326119751,110.306254393203,160.769186259107,128.708836789869,126.878996469657,124.764428192763,124.057244724867,108.349981075806,135.40375451567,143.504465558078,121.016212239234,134.350634975992,145.788601138281,126.751623161204,15.9025005999687,21.3111799501135,5.50742528533188,6.88339101585109,12.9194553404473,6.47643829965381,5.84798775702902,5.82434953226536,15.4488862144927,11.0779709675738,10.1316541795119,7.77347063922748,9.71819596459095,12.8326477414318,17.8363667794652,21.3320010945999,13.2059535016841,12.92135313923,12.6381111253696,10.0481814152773,8.54495016035667,19.1490359393624,16.654591369549,23.748307308347,20.0635482612771,18.0867168663147,17.9910721917628,19.1013218821107,22.9891319992968,20.3885093257075,8.84610551949874,16.985519244478,11.0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| ||
|EntrezGene=22628 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENSMUST00000126639_5end | |||
|description=CAGE_peak_2_at_Ywhag_5end | |||
|id=chr5:136410489..136410503,- | |||
|ontology_enrichment_celltype=CL:0002319!1.04e-14!43;CL:0000221!4.07e-14!44;CL:0000133!4.07e-14!44;CL:0000117!1.68e-13!23;CL:0000337!1.68e-13!23;CL:0000055!1.90e-13!50;CL:0000540!1.23e-12!33;CL:0000047!1.23e-12!33;CL:0000031!1.23e-12!33;CL:0000404!1.23e-12!33;CL:0000393!5.10e-12!39;CL:0000211!5.10e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.04e-14,43;CL:0000221,4.07e-14,44;CL:0000133,4.07e-14,44;CL:0000117,1.68e-13,23;CL:0000337,1.68e-13,23;CL:0000540,1.23e-12,33;CL:0000047,1.23e-12,33;CL:0000031,1.23e-12,33;CL:0000404,1.23e-12,33;CL:0000393,5.10e-12,39;CL:0000211,5.10e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.03e-31!75;UBERON:0001016!3.03e-31!75;UBERON:0001017!3.96e-31!73;UBERON:0005743!3.96e-31!73;UBERON:0004121!4.05e-27!102;UBERON:0000924!4.05e-27!102;UBERON:0006601!4.05e-27!102;UBERON:0002346!4.07e-27!71;UBERON:0003075!4.07e-27!71;UBERON:0007284!4.07e-27!71;UBERON:0001049!1.95e-26!52;UBERON:0005068!1.95e-26!52;UBERON:0006241!1.95e-26!52;UBERON:0007135!1.95e-26!52;UBERON:0000955!7.41e-25!50;UBERON:0006238!7.41e-25!50;UBERON:0002616!2.38e-24!49;UBERON:0000033!5.23e-22!63;UBERON:0002020!1.28e-20!34;UBERON:0003080!2.26e-19!40;UBERON:0003056!4.74e-19!49;UBERON:0002780!9.27e-19!39;UBERON:0001890!9.27e-19!39;UBERON:0006240!9.27e-19!39;UBERON:0002791!1.89e-17!29;UBERON:0003528!1.89e-17!29;UBERON:0001893!1.89e-17!29;UBERON:0000956!4.45e-13!21;UBERON:0001869!4.45e-13!21;UBERON:0000203!4.45e-13!21;UBERON:0002619!4.47e-11!17;UBERON:0007811!4.75e-11!86;UBERON:0000153!5.72e-10!94;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0003076!1.40e-07!12;UBERON:0003057!1.40e-07!12;UBERON:0000025!5.96e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.03e-31,75;UBERON:0001017,3.96e-31,73;UBERON:0000073,9.54e-28,54;UBERON:0001049,1.95e-26,52;UBERON:0005068,1.95e-26,52;UBERON:0006241,1.95e-26,52;UBERON:0007135,1.95e-26,52;UBERON:0002346,2.05e-26,64;UBERON:0003075,2.05e-26,64;UBERON:0007284,2.05e-26,64;UBERON:0004121,6.68e-26,95;UBERON:0000924,6.68e-26,95;UBERON:0006601,6.68e-26,95;UBERON:0010314,3.53e-23,92;UBERON:0000955,6.70e-23,47;UBERON:0006238,6.70e-23,47;UBERON:0002616,2.11e-22,46;UBERON:0010371,3.34e-21,73;UBERON:0002020,1.28e-20,34;UBERON:0003080,2.26e-19,40;UBERON:0003056,4.74e-19,49;UBERON:0002780,9.27e-19,39;UBERON:0001890,9.27e-19,39;UBERON:0006240,9.27e-19,39;UBERON:0003528,1.89e-17,29;UBERON:0002791,1.89e-17,29;UBERON:0001893,1.89e-17,29;UBERON:0000956,4.45e-13,21;UBERON:0001869,4.45e-13,21;UBERON:0000203,4.45e-13,21;UBERON:0002619,4.47e-11,17;UBERON:0002021,3.59e-08,10;UBERON:0000411,3.59e-08,10;UBERON:0001950,3.59e-08,10;UBERON:0003076,1.40e-07,12;UBERON:0003057,1.40e-07,12;UBERON:0000025,5.96e-07,114 | |||
|phase1_expression=12.8119077683835,4.53668029931169,4.09499315450582,1.20985684522732,1.50268718983904,6.04365378882803,7.2419918584613,5.03580961422147,12.67098499365,16.8526458951835,6.67750076079469,11.8062795313098,4.10881751834894,6.29426897416781,8.32774404539157,7.28910962603373,6.29605690315332,9.62159604342625,7.81552271552711,6.79023442876848,27.7241125892487,9.82980416888764,10.7091913546964,7.35965144849671,5.73523202667925,4.01962374880514,4.73838195774982,6.67960821326256,2.85035129184561,4.03248207615889,7.09537634096975,14.6057054895715,17.221814052368,0,3.17736781726402,5.31950865147176,3.87921776898501,7.53356935326434,10.1573594788094,9.94695113550217,13.5293242247133,8.19654581950135,8.73918635456076,14.7299277031425,15.1051627517077,14.5001934207728,28.1660883965294,26.8170942347949,26.3623419281366,27.9979054666968,23.937678097937,27.3129872293446,8.55691290894455,6.5282592781021,4.7053131879945,17.7509010864803,14.6132054368766,17.532851137433,106.620774873008,130.660771880192,123.597123683705,26.0910289693232,21.3430751066673,24.7472422252385,34.6103226898441,20.6039233334369,18.2756067416227,15.3687322128622,71.5458324928496,93.0190915105349,88.5468087289318,156.251088468881,150.411476388049,88.0708846355519,83.9606326119751,110.306254393203,160.769186259107,128.708836789869,126.878996469657,124.764428192763,124.057244724867,108.349981075806,135.40375451567,143.504465558078,121.016212239234,134.350634975992,145.788601138281,126.751623161204,15.9025005999687,21.3111799501135,5.50742528533188,6.88339101585109,12.9194553404473,6.47643829965381,5.84798775702902,5.82434953226536,15.4488862144927,11.0779709675738,10.1316541795119,7.77347063922748,9.71819596459095,12.8326477414318,17.8363667794652,21.3320010945999,13.2059535016841,12.92135313923,12.6381111253696,10.0481814152773,8.54495016035667,19.1490359393624,16.654591369549,23.748307308347,20.0635482612771,18.0867168663147,17.9910721917628,19.1013218821107,22.9891319992968,20.3885093257075,8.84610551949874,16.985519244478,11.0420759230197,10.6672555689749,1.86391761218122,45.3810235367898,41.889341362691,2.55457055208591,10.0644704584973,5.99902730993408,9.02198612218759,133.313669070292,105.682639251103,128.041784803009,168.261941946124,163.146461776751,110.958815794805,122.97887740536,9.980257657331,7.0911973247753,13.3943061969848,16.8353484709179,13.6626465110839,19.7715809812787,19.2666478891724,17.1803492332715,18.6420007674638,18.4483757210184,16.4915035225123,18.6266426932091,16.8143034487617,15.1284864134255,11.9646764431485,11.1789823538063,10.2877482213471,14.9748431604532,8.84863186554157,11.9420560091096,3.51106593656617,10.0365683774739,7.10408748488982,13.8774267598786,17.12040237862,16.9258337773354,12.7842157216014,12.0026181365916,11.415766353666,16.0448421877781,15.0233104783787,15.0627291653649,14.4812667923863,14.2825693748813,13.2142159559745,11.9883989688773,10.0993053033883,10.0654814070279,124.701939498527,120.707110320901,2.64335026387038,6.87571473325215,13.650448034255,14.6309103272076,12.371276286921,11.6976444281539,8.00560957841533,5.70676878337677,6.16887780007865,9.55253937399263,8.29406189040889,8.95304124185179,6.43381487493096,1.79763881730844,6.05186539649144,5.57595565112228,13.6560888686219,13.3670759753383,13.5249282807697,11.8117770150282,9.69762435838129,10.0995580642059,9.48548056863859,8.70899873079653,6.12295038581362,8.63780147452604,5.92905254174298,11.5123122944105,13.1694526725846,11.4679677316275,9.73728582664814,8.20002343158217,7.89340140522401,7.76779571117189,8.59316701907687,6.31491250332587,14.3768206527355,11.5363693777236,8.42501717409313,5.55673531483646,8.43167843552987,5.78932225636041,10.5309318394965,11.9379589415405,10.2667935158476,11.712410918488,7.97946844180907,9.88286918906713,7.85544014923845,8.58588050574315,10.0886492227962,9.7444463445461,11.1618338060241,6.71839590334526,9.84304396635605,8.38964539772767,4.52373851817817,15.2293591469239,8.85175691434265,6.89841865761831,139.679013289379,138.075366805615,15.9016897015375,18.935319540328,21.1390507008892,19.1314984705353,17.6647186140895,13.860190281248,15.5959071857676,19.5322806244294,14.5731852602962,19.2888866221466,22.9266911208984,71.3333322456412,13.6262481799938,13.3549202750441,14.8227133011754,8.08353602565424,5.30980553359851,13.8384962608339,11.4882951646605,9.8074641473067,10.9261700365886,6.45613810682248,8.01127708821486,7.63420831902762,8.19943970284859,6.63677191665214,5.27093042874994,3.09406629744561,20.0859367394735,16.2054984628179,22.2496936106338,18.0043109426538,18.6207245324387,19.9773075714319,23.2014119048991,21.6170113871366,26.2832313031356,23.7251919367479,11.2469483008031,9.23363016472288,10.6566521619298,10.8563264870681,10.8628833042854,9.68431308495861,5.53813589596716,147.783965702376,7.34744787430767,8.87463532241857,11.8524497516615,8.2882121082064,8.33834789098253,8.69357058184786,7.47905091972963,9.79660166265606,10.6413979829406,9.54670618015114,16.7658076598002,12.19916802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| |||
|short_description=p2@Ywhag | |||
}} |
Revision as of 06:41, 14 September 2013
Short description: | p2@Ywhag |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ywhag_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -3bp_to_ENSMUST00000126639_5end |
EntrezGene: | Ywhag |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.04e-14 | 43 |
ectodermal cell | 4.07e-14 | 44 |
neurectodermal cell | 4.07e-14 | 44 |
CNS neuron (sensu Vertebrata) | 1.68e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-13 | 23 |
neuron | 1.23e-12 | 33 |
neuronal stem cell | 1.23e-12 | 33 |
neuroblast | 1.23e-12 | 33 |
electrically signaling cell | 1.23e-12 | 33 |
electrically responsive cell | 5.10e-12 | 39 |
electrically active cell | 5.10e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.